3A0J
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![BU of 3a0j by Molmil](/molmil-images/mine/3a0j) | Crystal structure of cold shock protein 1 from Thermus thermophilus HB8 | 分子名称: | Cold shock protein | 著者 | Miyazaki, T, Nakagawa, N, Kuramitsu, S, Masui, R, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | 登録日 | 2009-03-19 | 公開日 | 2010-03-23 | 最終更新日 | 2023-11-01 | 実験手法 | X-RAY DIFFRACTION (1.65 Å) | 主引用文献 | The Biological Action of Cold Shock Protein 1 from Thermus thermophilus HB8 To be Published
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7BWB
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![BU of 7bwb by Molmil](/molmil-images/mine/7bwb) | Bombyx mori GH32 beta-fructofuranosidase BmSUC1 | 分子名称: | Beta-fructofuranosidase | 著者 | Miyazaki, T, Oba, N. | 登録日 | 2020-04-14 | 公開日 | 2020-11-04 | 最終更新日 | 2023-11-29 | 実験手法 | X-RAY DIFFRACTION (1.8 Å) | 主引用文献 | Structural insight into the substrate specificity of Bombyx mori beta-fructofuranosidase belonging to the glycoside hydrolase family 32. Insect Biochem.Mol.Biol., 127, 2020
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7BWC
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7F7Q
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7F7R
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7FE1
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![BU of 7fe1 by Molmil](/molmil-images/mine/7fe1) | Crystal structure of GH92 alpha-1,2-mannosidase from Enterococcus faecalis ATCC 10100 in complex with methyl alpha-1,2-C-mannobioside | 分子名称: | 1,2-ETHANEDIOL, ACETIC ACID, Alpha-1,2-mannosidase, ... | 著者 | Miyazaki, T, Alonso-Gil, S. | 登録日 | 2021-07-19 | 公開日 | 2022-02-02 | 最終更新日 | 2023-11-29 | 実験手法 | X-RAY DIFFRACTION (1.72 Å) | 主引用文献 | Unlocking the Hydrolytic Mechanism of GH92 alpha-1,2-Mannosidases: Computation Inspires the use of C-Glycosides as Michaelis Complex Mimics. Chemistry, 28, 2022
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7FE2
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![BU of 7fe2 by Molmil](/molmil-images/mine/7fe2) | Crystal structure of the mutant E494Q of GH92 alpha-1,2-mannosidase from Enterococcus faecalis ATCC 10100 in complex with alpha-1,2-mannobiose | 分子名称: | 1,2-ETHANEDIOL, ACETATE ION, Alpha-1,2-mannosidase, ... | 著者 | Miyazaki, T, Alonso-Gil, S. | 登録日 | 2021-07-19 | 公開日 | 2022-02-02 | 最終更新日 | 2023-11-29 | 実験手法 | X-RAY DIFFRACTION (1.75 Å) | 主引用文献 | Unlocking the Hydrolytic Mechanism of GH92 alpha-1,2-Mannosidases: Computation Inspires the use of C-Glycosides as Michaelis Complex Mimics. Chemistry, 28, 2022
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3W9A
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![BU of 3w9a by Molmil](/molmil-images/mine/3w9a) | Crystal structure of the catalytic domain of the glycoside hydrolase family 131 protein from Coprinopsis cinerea | 分子名称: | GLYCEROL, Putative uncharacterized protein | 著者 | Miyazaki, T, Tanaka, Y, Tamura, M, Yoshida, M, Nishikawa, A, Tonozuka, T. | 登録日 | 2013-04-01 | 公開日 | 2013-05-22 | 最終更新日 | 2013-07-10 | 実験手法 | X-RAY DIFFRACTION (1.99 Å) | 主引用文献 | Crystal structure of the N-terminal domain of a glycoside hydrolase family 131 protein from Coprinopsis cinerea Febs Lett., 587, 2013
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3W7W
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![BU of 3w7w by Molmil](/molmil-images/mine/3w7w) | Crystal structure of E. coli YgjK E727A complexed with 2-O-alpha-D-glucopyranosyl-alpha-D-galactopyranose | 分子名称: | CALCIUM ION, MAGNESIUM ION, Uncharacterized protein YgjK, ... | 著者 | Miyazaki, T, Ichikawa, M, Yokoi, G, Kitaoka, M, Mori, H, Kitano, Y, Nishikawa, A, Tonozuka, T. | 登録日 | 2013-03-08 | 公開日 | 2013-07-17 | 最終更新日 | 2023-11-08 | 実験手法 | X-RAY DIFFRACTION (2 Å) | 主引用文献 | Structure of a bacterial glycoside hydrolase family 63 enzyme in complex with its glycosynthase product, and insights into the substrate specificity. Febs J., 280, 2013
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3W7X
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![BU of 3w7x by Molmil](/molmil-images/mine/3w7x) | Crystal structure of E. coli YgjK D324N complexed with melibiose | 分子名称: | CALCIUM ION, Uncharacterized protein YgjK, alpha-D-galactopyranose-(1-6)-alpha-D-glucopyranose | 著者 | Miyazaki, T, Ichikawa, M, Yokoi, G, Kitaoka, M, Mori, H, Kitano, Y, Nishikawa, A, Tonozuka, T. | 登録日 | 2013-03-08 | 公開日 | 2013-07-17 | 最終更新日 | 2023-11-08 | 実験手法 | X-RAY DIFFRACTION (2.7 Å) | 主引用文献 | Structure of a bacterial glycoside hydrolase family 63 enzyme in complex with its glycosynthase product, and insights into the substrate specificity. Febs J., 280, 2013
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3WWG
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![BU of 3wwg by Molmil](/molmil-images/mine/3wwg) | Crystal structure of the N-glycan-deficient variant N448A of isopullulanase complexed with isopanose | 分子名称: | 2-acetamido-2-deoxy-beta-D-glucopyranose, Isopullulanase, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose, ... | 著者 | Miyazaki, T, Yashiro, H, Nishikawa, A, Tonozuka, T. | 登録日 | 2014-06-17 | 公開日 | 2014-11-12 | 最終更新日 | 2023-11-08 | 実験手法 | X-RAY DIFFRACTION (2.2 Å) | 主引用文献 | The side chain of a glycosylated asparagine residue is important for the stability of isopullulanase J.Biochem., 157, 2015
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3W7S
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![BU of 3w7s by Molmil](/molmil-images/mine/3w7s) | Escherichia coli K12 YgjK complexed with glucose | 分子名称: | CALCIUM ION, Uncharacterized protein YgjK, alpha-D-glucopyranose | 著者 | Miyazaki, T, Kurakata, Y, Uechi, A, Yoshida, H, Kamitori, S, Sakano, Y, Nishikawa, A, Tonozuka, T. | 登録日 | 2013-03-06 | 公開日 | 2013-04-03 | 最終更新日 | 2020-07-29 | 実験手法 | X-RAY DIFFRACTION (1.9 Å) | 主引用文献 | Structural insights into the substrate specificity and function of Escherichia coli K12 YgjK, a glucosidase belonging to the glycoside hydrolase family 63. J.Mol.Biol., 381, 2008
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3W7T
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![BU of 3w7t by Molmil](/molmil-images/mine/3w7t) | Escherichia coli K12 YgjK complexed with mannose | 分子名称: | CALCIUM ION, MAGNESIUM ION, Uncharacterized protein YgjK, ... | 著者 | Miyazaki, T, Kurakata, Y, Uechi, A, Yoshida, H, Kamitori, S, Sakano, Y, Nishikawa, A, Tonozuka, T. | 登録日 | 2013-03-06 | 公開日 | 2013-04-03 | 最終更新日 | 2023-11-08 | 実験手法 | X-RAY DIFFRACTION (1.5 Å) | 主引用文献 | Structural insights into the substrate specificity and function of Escherichia coli K12 YgjK, a glucosidase belonging to the glycoside hydrolase family 63. J.Mol.Biol., 381, 2008
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3W7U
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![BU of 3w7u by Molmil](/molmil-images/mine/3w7u) | Escherichia coli K12 YgjK complexed with galactose | 分子名称: | CALCIUM ION, Uncharacterized protein YgjK, alpha-D-galactopyranose | 著者 | Miyazaki, T, Kurakata, Y, Uechi, A, Yoshida, H, Kamitori, S, Sakano, Y, Nishikawa, A, Tonozuka, T. | 登録日 | 2013-03-06 | 公開日 | 2013-04-03 | 最終更新日 | 2020-07-29 | 実験手法 | X-RAY DIFFRACTION (1.99 Å) | 主引用文献 | Structural insights into the substrate specificity and function of Escherichia coli K12 YgjK, a glucosidase belonging to the glycoside hydrolase family 63. J.Mol.Biol., 381, 2008
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3WZ1
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![BU of 3wz1 by Molmil](/molmil-images/mine/3wz1) | Catalytic domain of beta-agarase from Microbulbifer thermotolerans JAMB-A94 | 分子名称: | Agarase, GLYCEROL, SODIUM ION | 著者 | Takagi, E, Hatada, Y, Akita, M, Ohta, Y, Yokoi, G, Miyazaki, T, Nishikawa, A, Tonozuka, T. | 登録日 | 2014-09-12 | 公開日 | 2014-11-19 | 最終更新日 | 2023-11-08 | 実験手法 | X-RAY DIFFRACTION (1.6 Å) | 主引用文献 | Crystal structure of the catalytic domain of a GH16 beta-agarase from a deep-sea bacterium, Microbulbifer thermotolerans JAMB-A94 Biosci.Biotechnol.Biochem., 79, 2015
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6QZH
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![BU of 6qzh by Molmil](/molmil-images/mine/6qzh) | Structure of the human CC Chemokine Receptor 7 in complex with the intracellular allosteric antagonist Cmp2105 and the insertion protein Sialidase NanA | 分子名称: | 3-[[4-[[(1~{R})-2,2-dimethyl-1-(5-methylfuran-2-yl)propyl]amino]-1,1-bis(oxidanylidene)-1,2,5-thiadiazol-3-yl]amino]-~{N},~{N},6-trimethyl-2-oxidanyl-benzamide, C-C chemokine receptor type 7,Sialidase A,C-C chemokine receptor type 7, D(-)-TARTARIC ACID, ... | 著者 | Jaeger, K, Bruenle, S, Weinert, T, Guba, W, Muehle, J, Miyazaki, T, Weber, M, Furrer, A, Haenggi, N, Tetaz, T, Huang, C.Y, Mattle, D, Vonach, J.M, Gast, A, Kuglstatter, A, Rudolph, M.G, Nogly, P, Benz, J, Dawson, R.J.P, Standfuss, J. | 登録日 | 2019-03-11 | 公開日 | 2019-09-04 | 最終更新日 | 2024-01-24 | 実験手法 | X-RAY DIFFRACTION (2.1 Å) | 主引用文献 | Structural Basis for Allosteric Ligand Recognition in the Human CC Chemokine Receptor 7. Cell, 178, 2019
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2Z1Y
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![BU of 2z1y by Molmil](/molmil-images/mine/2z1y) | Crystal structure of LysN, alpha-aminoadipate aminotransferase (complexed with N-(5'-phosphopyridoxyl)-L-leucine), from Thermus thermophilus HB27 | 分子名称: | Alpha-aminodipate aminotransferase, LEUCINE, PYRIDOXAL-5'-PHOSPHATE | 著者 | Tomita, T, Miyazaki, T, Miyagawa, T, Fushinobu, S, Kuzuyama, T, Nishiyama, M. | 登録日 | 2007-05-16 | 公開日 | 2008-06-03 | 最終更新日 | 2023-11-01 | 実験手法 | X-RAY DIFFRACTION (1.75 Å) | 主引用文献 | Mechanism of broad substrate specificity of alpha-aminoadipate aminotransferase from Thermus thermophilus To be Published
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2ZP7
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![BU of 2zp7 by Molmil](/molmil-images/mine/2zp7) | Crystal structure of LysN, alpha-aminoadipate aminotransferase (Leucine complex), from Thermus thermophilus HB27 | 分子名称: | Alpha-aminodipate aminotransferase, LEUCINE, PYRIDOXAL-5'-PHOSPHATE | 著者 | Tomita, T, Miyazaki, T, Miyagawa, T, Fushinobu, S, Kuzuyama, T, Nishiyama, M. | 登録日 | 2008-06-30 | 公開日 | 2009-01-13 | 最終更新日 | 2011-07-13 | 実験手法 | X-RAY DIFFRACTION (2.26 Å) | 主引用文献 | Mechanism for multiple-substrates recognition of alpha-aminoadipate aminotransferase from Thermus thermophilus Proteins, 2008
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8WG1
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![BU of 8wg1 by Molmil](/molmil-images/mine/8wg1) | Crystal structure of GH97 glucodextranase mutant E509Q from Flavobacterium johnsoniae in complex with panose | 分子名称: | 1,2-ETHANEDIOL, CALCIUM ION, Candidate alpha-glucosidase Glycoside hydrolase family 97, ... | 著者 | Kurata, R, Nakamura, S, Miyazaki, T. | 登録日 | 2023-09-20 | 公開日 | 2024-05-08 | 実験手法 | X-RAY DIFFRACTION (2.34 Å) | 主引用文献 | Structural insights into alpha-(1->6)-linkage preference of GH97 glucodextranase from Flavobacterium johnsoniae. Febs J., 2024
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8WG0
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![BU of 8wg0 by Molmil](/molmil-images/mine/8wg0) | Crystal structure of GH97 glucodextranase from Flavobacterium johnsoniae in complex with glucose | 分子名称: | 1,2-ETHANEDIOL, CALCIUM ION, Candidate alpha-glucosidase Glycoside hydrolase family 97, ... | 著者 | Kurata, R, Nakamura, S, Miyazaki, T. | 登録日 | 2023-09-20 | 公開日 | 2024-05-08 | 実験手法 | X-RAY DIFFRACTION (1.95 Å) | 主引用文献 | Structural insights into alpha-(1->6)-linkage preference of GH97 glucodextranase from Flavobacterium johnsoniae. Febs J., 2024
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8WG2
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2EGY
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![BU of 2egy by Molmil](/molmil-images/mine/2egy) | Crystal structure of LysN, alpha-aminoadipate aminotransferase (substrate free form), from Thermus thermophilus HB27 | 分子名称: | Alpha-aminodipate aminotransferase, PYRIDOXAL-5'-PHOSPHATE | 著者 | Tomita, T, Miyazaki, T, Miyagawa, T, Fushinobu, S, Kuzuyama, T, Nishiyama, M. | 登録日 | 2007-03-02 | 公開日 | 2008-03-04 | 最終更新日 | 2023-10-25 | 実験手法 | X-RAY DIFFRACTION (2.67 Å) | 主引用文献 | Crystal structure of LysN, alpha-aminoadipate aminotransferase, from Thermus thermophilus HB27 To be Published
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8IUA
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8IU8
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8IU9
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