Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 232 件

2WKT
DownloadVisualize
BU of 2wkt by Molmil
BIOSYNTHETIC THIOLASE FROM Z. RAMIGERA. COMPLEX OF THE N316A MUTANT WITH COENZYME A.
分子名称: ACETYL-COA ACETYLTRANSFERASE, CHLORIDE ION, COENZYME A, ...
著者Merilainen, G, Poikela, V, Kursula, P, Wierenga, R.K.
登録日2009-06-18
公開日2009-11-03
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献The Thiolase Reaction Mechanism: The Importance of Asn316 and His348 for Stabilizing the Enolate Intermediate of the Claisen Condensation.
Biochemistry, 48, 2009
2WL6
DownloadVisualize
BU of 2wl6 by Molmil
BIOSYNTHETIC THIOLASE FROM Z. RAMIGERA. THE N316H-H348N MUTANT.
分子名称: ACETYL-COA ACETYLTRANSFERASE
著者Merilainen, G, Poikela, V, Kursula, P, Wierenga, R.K.
登録日2009-06-22
公開日2009-11-03
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.98 Å)
主引用文献The Thiolase Reaction Mechanism: The Importance of Asn316 and His348 for Stabilizing the Enolate Intermediate of the Claisen Condensation.
Biochemistry, 48, 2009
2WL5
DownloadVisualize
BU of 2wl5 by Molmil
BIOSYNTHETIC THIOLASE FROM Z. RAMIGERA. COMPLEX OF THE H348N MUTANT WITH COENZYME A.
分子名称: ACETYL-COA ACETYLTRANSFERASE, CHLORIDE ION, COENZYME A, ...
著者Merilainen, G, Poikela, V, Kursula, P, Wierenga, R.K.
登録日2009-06-22
公開日2009-11-03
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献The Thiolase Reaction Mechanism: The Importance of Asn316 and His348 for Stabilizing the Enolate Intermediate of the Claisen Condensation.
Biochemistry, 48, 2009
2WKV
DownloadVisualize
BU of 2wkv by Molmil
BIOSYNTHETIC THIOLASE FROM Z. RAMIGERA. COMPLEX OF THE N316D MUTANT WITH COENZYME A.
分子名称: ACETYL-COA ACETYLTRANSFERASE, COENZYME A, SODIUM ION, ...
著者Merilainen, G, Poikela, V, Kursula, P, Wierenga, R.K.
登録日2009-06-18
公開日2009-11-03
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献The Thiolase Reaction Mechanism: The Importance of Asn316 and His348 for Stabilizing the Enolate Intermediate of the Claisen Condensation.
Biochemistry, 48, 2009
2WKU
DownloadVisualize
BU of 2wku by Molmil
BIOSYNTHETIC THIOLASE FROM Z. RAMIGERA. THE N316H MUTANT.
分子名称: ACETYL-COA ACETYLTRANSFERASE, D-mannose, SULFATE ION
著者Merilainen, G, Poikela, V, Kursula, P, Wierenga, R.K.
登録日2009-06-18
公開日2009-11-03
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献The Thiolase Reaction Mechanism: The Importance of Asn316 and His348 for Stabilizing the Enolate Intermediate of the Claisen Condensation.
Biochemistry, 48, 2009
2WL4
DownloadVisualize
BU of 2wl4 by Molmil
BIOSYNTHETIC THIOLASE FROM Z. RAMIGERA. COMPLEX OF THE H348A MUTANT WITH COENZYME A.
分子名称: ACETYL-COA ACETYLTRANSFERASE, CHLORIDE ION, COENZYME A, ...
著者Merilainen, G, Poikela, V, Kursula, P, Wierenga, R.K.
登録日2009-06-22
公開日2009-11-03
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献The Thiolase Reaction Mechanism: The Importance of Asn316 and His348 for Stabilizing the Enolate Intermediate of the Claisen Condensation.
Biochemistry, 48, 2009
4QQ0
DownloadVisualize
BU of 4qq0 by Molmil
CdsD - The structural protein of the Type III secretion system of Chlamydia trachomatis: C-terminal domain
分子名称: Adenylate cyclase-like protein, SULFATE ION
著者Merilainen, G, Wierenga, R.K.
登録日2014-06-26
公開日2015-07-01
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献The extended structure of the periplasmic region of CdsD, a structural protein of the type III secretion system of Chlamydia trachomatis.
Protein Sci., 25, 2016
3K0S
DownloadVisualize
BU of 3k0s by Molmil
Crystal structure of E.coli DNA mismatch repair protein MutS, D693N mutant, in complex with GT mismatched DNA
分子名称: 5'-D(*AP*GP*CP*TP*GP*CP*CP*AP*GP*GP*CP*AP*CP*CP*AP*GP*TP*GP*TP*CP*AP*GP*CP*GP*TP*CP*CP*TP*AP*T)-3', 5'-D(*AP*TP*AP*GP*GP*AP*CP*GP*CP*TP*GP*AP*C*AP*CP*T*GP*GP*TP*GP*CP*TP*TP*GP*GP*CP*AP*GP*CP*T)-3', ADENOSINE-5'-DIPHOSPHATE, ...
著者Reumer, G.A, Winterwerp, H.H.K, Sixma, T.K.
登録日2009-09-25
公開日2010-02-16
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Magnesium coordination controls the molecular switch function of DNA mismatch repair protein MutS.
J.Biol.Chem., 285, 2010
1RYB
DownloadVisualize
BU of 1ryb by Molmil
Crystal Structure of the Chloroplast Group II Intron Splicing Factor CRS2
分子名称: CRS2
著者Ostheimer, G.J, Barkan, A, Matthews, B.W.
登録日2003-12-21
公開日2003-12-30
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structural analysis of the group II intron splicing factor CRS2 yields insights into its protein and RNA interaction surfaces
J.Mol.Biol., 345, 2005
1RYN
DownloadVisualize
BU of 1ryn by Molmil
Structure of the Chloroplast Group II Intron Splicing Factor CRS2
分子名称: protein CRS2
著者Ostheimer, G.J, Barkan, A, Matthews, B.W.
登録日2003-12-22
公開日2004-01-06
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Structural analysis of the group II intron splicing factor CRS2 yields insights into its protein and RNA interaction surfaces
J.Mol.Biol., 345, 2005
1BNB
DownloadVisualize
BU of 1bnb by Molmil
SOLUTION STRUCTURE OF BOVINE NEUTROPHIL BETA-DEFENSIN 12: THE PEPTIDE FOLD OF THE BETA-DEFENSINS IS IDENTICAL TO THAT OF THE CLASSICAL DEFENSINS
分子名称: BOVINE NEUTROPHIL BETA-DEFENSIN 12
著者Zimmermann, G.R, Legault, P, Selsted, M.E, Pardi, A.
登録日1995-03-08
公開日1995-10-15
最終更新日2024-10-23
実験手法SOLUTION NMR
主引用文献Solution structure of bovine neutrophil beta-defensin-12: the peptide fold of the beta-defensins is identical to that of the classical defensins.
Biochemistry, 34, 1995
1RYM
DownloadVisualize
BU of 1rym by Molmil
Structure of the Group II Intron Splicing Factor CRS2
分子名称: protein CRS2
著者Ostheimer, G.J, Barkan, A, Matthews, B.W.
登録日2003-12-22
公開日2004-01-06
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural analysis of the group II intron splicing factor CRS2 yields insights into its protein and RNA interaction surfaces
J.Mol.Biol., 345, 2005
1EHT
DownloadVisualize
BU of 1eht by Molmil
THEOPHYLLINE-BINDING RNA IN COMPLEX WITH THEOPHYLLINE, NMR, 10 STRUCTURES
分子名称: THEOPHYLLINE, THEOPHYLLINE-BINDING RNA
著者Zimmermann, G.R, Pardi, A.
登録日1997-03-20
公開日1997-12-24
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Interlocking structural motifs mediate molecular discrimination by a theophylline-binding RNA.
Nat.Struct.Biol., 4, 1997
1LN4
DownloadVisualize
BU of 1ln4 by Molmil
CRYSTAL STRUCTURE OF E. COLI YHBY
分子名称: Hypothetical protein yhbY
著者Ostheimer, G.J, Barkan, A, Matthews, B.W.
登録日2002-05-02
公開日2002-05-15
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Crystal structure of E. coli YhbY: a representative of a novel class of RNA binding proteins
Structure, 10, 2002
1HV2
DownloadVisualize
BU of 1hv2 by Molmil
SOLUTION STRUCTURE OF YEAST ELONGIN C IN COMPLEX WITH A VON HIPPEL-LINDAU PEPTIDE
分子名称: ELONGIN C, VON HIPPEL-LINDAU DISEASE TUMOR SUPPRESSOR
著者Botuyan, M.V, Mer, G, Yi, G.-S, Koth, C.M, Case, D.A, Edwards, A.M, Chazin, W.J, Arrowsmith, C.H.
登録日2001-01-05
公開日2001-09-06
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Solution structure and dynamics of yeast elongin C in complex with a von Hippel-Lindau peptide.
J.Mol.Biol., 312, 2001
4V2D
DownloadVisualize
BU of 4v2d by Molmil
FLRT2 LRR domain
分子名称: FIBRONECTIN LEUCINE RICH TRANSMEMBRANE PROTEIN 2
著者Seiradake, E, del Toro, D, Nagel, D, Cop, F, Haertl, R, Ruff, T, Seyit-Bremer, G, Harlos, K, Border, E.C, Acker-Palmer, A, Jones, E.Y, Klein, R.
登録日2014-10-08
公開日2014-11-05
最終更新日2015-07-22
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Flrt Structure: Balancing Repulsion and Cell Adhesion in Cortical and Vascular Development
Neuron, 84, 2014
4UV9
DownloadVisualize
BU of 4uv9 by Molmil
LSD1(KDM1A)-CoREST in complex with 1-Ethyl-Tranylcypromine
分子名称: LYSINE-SPECIFIC HISTONE DEMETHYLASE 1A, REST COREPRESSOR 1, [(2R,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-3,4-dihydroxytetrahydrofuran-2-yl]methyl (2R,3S,4S)-2,3,4-trihydroxy-5-[(4aS,10aS)-4a-[(1S,3E)-3-imino-1-phenylpentyl]-7,8-dimethyl-2,4-dioxo-1,3,4,4a,5,10a-hexahydrobenzo[g]pteridin-10(2H)-yl]pentyl dihydrogen diphosphate
著者Vianello, P, Botrugno, O, Cappa, A, Ciossani, G, Dessanti, P, Mai, A, Mattevi, A, Meroni, G, Minucci, S, Thaler, F, Tortorici, M, Trifiro, P, Valente, S, Villa, M, Varasi, M, Mercurio, C.
登録日2014-08-05
公開日2014-09-10
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Synthesis, Biological Activity and Mechanistic Insights of 1-Substituted Cyclopropylamine Derivatives: A Novel Class of Irreversible Inhibitors of Histone Demethylase Kdm1A.
Eur.J.Med.Chem., 86C, 2014
4UVB
DownloadVisualize
BU of 4uvb by Molmil
LSD1(KDM1A)-CoREST in complex with 1-Methyl-Tranylcypromine (1S,2R)
分子名称: LYSINE-SPECIFIC HISTONE DEMETHYLASE 1A, REST COREPRESSOR 1, [(2R,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-3,4-dihydroxytetrahydrofuran-2-yl]methyl (2R,3S,4S)-5-[(1R,3S,3aS,7aS)-1-amino-1,10,11-trimethyl-4,6-dioxo-3-phenyl-2,3,5,6,7,7a-hexahydro-1H-benzo[g]pyrrolo[2,1-e]pteridin-8(4H)-yl]-2,3,4-trihydroxypentyl dihydrogen diphosphate
著者Vianello, P, Botrugno, O, Cappa, A, Ciossani, G, Dessanti, P, Mai, A, Mattevi, A, Meroni, G, Minucci, S, Thaler, F, Tortorici, M, Trifiro, P, Valente, S, Villa, M, Varasi, M, Mercurio, C.
登録日2014-08-05
公開日2014-09-10
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Synthesis, Biological Activity and Mechanistic Insights of 1-Substituted Cyclopropylamine Derivatives: A Novel Class of Irreversible Inhibitors of Histone Demethylase Kdm1A.
Eur.J.Med.Chem., 86C, 2014
3ZRM
DownloadVisualize
BU of 3zrm by Molmil
Identification of 2-(4-pyridyl)thienopyridinones as GSK-3beta inhibitors
分子名称: 7-(4-HYDROXYPHENYL)-2-PYRIDIN-4-YL-5H-THIENO[3,2-C]PYRIDIN-4-ONE, GLYCEROL, GLYCOGEN SYNTHASE KINASE-3 BETA, ...
著者Gentile, G, Bernasconi, G, Pozzan, A, Merlo, G, Marzorati, P, Bamborough, P, Bax, B, Bridges, A, Brough, C, Carter, P, Cutler, G, Neu, M, Takada, M.
登録日2011-06-17
公開日2011-06-29
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (2.49 Å)
主引用文献Identification of 2-(4-Pyridyl)Thienopyridinones as Gsk-3Beta Inhibitors.
Bioorg.Med.Chem.Lett., 21, 2011
3ZRK
DownloadVisualize
BU of 3zrk by Molmil
Identification of 2-(4-pyridyl)thienopyridinones as GSK-3beta inhibitors
分子名称: 2-(4-PYRIDINYL)FURO[3,2-C]PYRIDIN-4(5H)-ONE, GLYCEROL, GLYCOGEN SYNTHASE KINASE-3 BETA, ...
著者Gentile, G, Bernasconi, G, Pozzan, A, Merlo, G, Marzorati, P, Bamborough, P, Bax, B, Bridges, A, Brough, C, Carter, P, Cutler, G, Neu, M, Takada, M.
登録日2011-06-16
公開日2011-06-29
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.37 Å)
主引用文献Identification of 2-(4-Pyridyl)Thienopyridinones as Gsk-3Beta Inhibitors.
Bioorg.Med.Chem.Lett., 21, 2011
3ZRL
DownloadVisualize
BU of 3zrl by Molmil
Identification of 2-(4-pyridyl)thienopyridinones as GSK-3beta inhibitors
分子名称: 7-BROMO-2-PYRIDIN-4-YL-5H-THIENO[3,2-C]PYRIDIN-4-ONE, GLYCEROL, GLYCOGEN SYNTHASE KINASE-3 BETA, ...
著者Gentile, G, Bernasconi, G, Pozzan, A, Merlo, G, Marzorati, P, Bamborough, P, Bax, B, Bridges, A, Brough, C, Carter, P, Cutler, G, Neu, M, Takada, M.
登録日2011-06-17
公開日2011-06-29
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (2.48 Å)
主引用文献Identification of 2-(4-Pyridyl)Thienopyridinones as Gsk-3Beta Inhibitors.
Bioorg.Med.Chem.Lett., 21, 2011
6MXY
DownloadVisualize
BU of 6mxy by Molmil
Structure of 53BP1 tandem Tudor domains in complex with small molecule UNC3351
分子名称: N-[3-(tert-butylamino)propyl]-3-(trifluoromethyl)benzamide, PHOSPHATE ION, TP53-binding protein 1
著者Cui, G, Botuyan, M.V, Mer, G.
登録日2018-10-31
公開日2019-11-27
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.624 Å)
主引用文献An autoinhibited state of 53BP1 revealed by small molecule antagonists and protein engineering.
Nat Commun, 14, 2023
6MXZ
DownloadVisualize
BU of 6mxz by Molmil
Structure of 53BP1 Tudor domains in complex with small molecule UNC3474
分子名称: FORMIC ACID, N-[3-(tert-butylamino)propyl]-3-(propan-2-yl)benzamide, TP53-binding protein 1
著者Cui, G, Botuyan, M.V, Schuller, D.J, Mer, G.
登録日2018-10-31
公開日2019-11-27
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献An autoinhibited state of 53BP1 revealed by small molecule antagonists and protein engineering.
Nat Commun, 14, 2023
6MXX
DownloadVisualize
BU of 6mxx by Molmil
Structure of 53BP1 tandem Tudor domains in complex with small molecule UNC2991
分子名称: FORMIC ACID, N-[3-(tert-butylamino)propyl]-3-iodobenzamide, PHOSPHATE ION, ...
著者Cui, G, Botuyan, M.V, Mer, G.
登録日2018-10-31
公開日2019-11-27
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.298 Å)
主引用文献An autoinhibited state of 53BP1 revealed by small molecule antagonists and protein engineering.
Nat Commun, 14, 2023
8DV1
DownloadVisualize
BU of 8dv1 by Molmil
SARS-CoV-2 Wuhan-hu-1-Spike-RBD bound to linker variant of affinity matured ACE2 mimetic CVD432
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Angiotensin-converting enzyme 2,Immunoglobulin gamma-1 heavy chain fusion,Immunoglobulin gamma-1 heavy chain, Spike glycoprotein
著者QCRG Structural Biology Consortium, Remesh, S.G, Merz, G.E, Brilot, A.F, Chio, U, Verba, K.A.
登録日2022-07-27
公開日2022-08-31
最終更新日2023-03-15
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Computational pipeline provides mechanistic understanding of Omicron variant of concern neutralizing engineered ACE2 receptor traps.
Structure, 31, 2023

226707

件を2024-10-30に公開中

PDB statisticsPDBj update infoContact PDBjnumon