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PDB: 298 results

1JD3
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Chorismate lyase G90A mutant with bound product
Descriptor: P-HYDROXYBENZOIC ACID, chorismate lyase
Authors:Mayhew, M, Smith, N, Holden, M.J, Gallagher, D.T.
Deposit date:2001-06-12
Release date:2001-06-20
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.03 Å)
Cite:Structural analysis of ligand binding and catalysis in chorismate lyase.
Arch.Biochem.Biophys., 445, 2006
2OJT
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Structure and mechanism of kainate receptor modulation by anions
Descriptor: (S)-1-(2-AMINO-2-CARBOXYETHYL)-3(2-CARBOXYTHIOPHENE-3-YL-METHYL)-5-METHYLPYRIMIDINE-2,4-DIONE, BROMIDE ION, Glutamate receptor, ...
Authors:Mayer, M.L.
Deposit date:2007-01-14
Release date:2007-04-03
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structure and mechanism of kainate receptor modulation by anions.
Neuron, 53, 2007
1S0I
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Trypanosoma cruzi trans-sialidase in complex with sialyl-lactose (Michaelis complex)
Descriptor: N-acetyl-alpha-neuraminic acid-(2-3)-beta-D-galactopyranose-(1-4)-alpha-D-glucopyranose, trans-sialidase
Authors:Amaya, M.F, Watts, A.G, Damager, I, Wehenkel, A, Nguyen, T, Buschiazzo, A, Paris, G, Frasch, A.C, Withers, S.G, Alzari, P.M.
Deposit date:2003-12-31
Release date:2004-05-18
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structural Insights into the Catalytic Mechanism of Trypanosoma cruzi trans-Sialidase.
Structure, 12, 2004
1S0J
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Trypanosoma cruzi trans-sialidase in complex with MuNANA (Michaelis complex)
Descriptor: 4-METHYL-2-OXO-2H-CHROMEN-7-YL 5-(ACETYLAMINO)-3,5-DIDEOXY-L-ERYTHRO-NON-2-ULOPYRANOSIDONIC ACID, trans-sialidase
Authors:Amaya, M.F, Watts, A.G, Damager, I, Wehenkel, A, Nguyen, T, Buschiazzo, A, Paris, G, Frasch, A.C, Withers, S.G, Alzari, P.M.
Deposit date:2003-12-31
Release date:2004-05-18
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Structural Insights into the Catalytic Mechanism of Trypanosoma cruzi trans-Sialidase.
Structure, 12, 2004
1TKI
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AUTOINHIBITED SERINE KINASE DOMAIN OF THE GIANT MUSCLE PROTEIN TITIN
Descriptor: TITIN
Authors:Mayans, M.O, Gautel, M, Wilmanns, M.
Deposit date:1998-05-29
Release date:1999-06-08
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural basis for activation of the titin kinase domain during myofibrillogenesis.
Nature, 395, 1998
1SD3
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Crystal structure of the GLUR6 ligand binding core in complex with 2S,4R-4-methylglutamate at 1.8 Angstrom resolution
Descriptor: 2S,4R-4-METHYLGLUTAMATE, Glutamate receptor, ionotropic kainate 2
Authors:Mayer, M.L.
Deposit date:2004-02-12
Release date:2005-02-15
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structures of the GluR5 and GluR6 ligand binding cores: molecular mechanisms underlying kainate receptor selectivity.
Neuron, 45, 2005
1S50
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X-ray structure of the GluR6 ligand binding core (S1S2A) in complex with glutamate at 1.65 A resolution
Descriptor: GLUTAMIC ACID, Glutamate Receptor 6
Authors:Mayer, M.L.
Deposit date:2004-01-19
Release date:2005-02-08
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Crystal structures of the GluR5 and GluR6 ligand binding cores: Molecular mechanisms underlying kainate receptor selectivity
Neuron, 45, 2005
1S9T
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Crystal structure of the GLUR6 ligand binding core in complex with quisqualate at 1.8A resolution
Descriptor: (S)-2-AMINO-3-(3,5-DIOXO-[1,2,4]OXADIAZOLIDIN-2-YL)-PROPIONIC ACID, CHLORIDE ION, Glutamate receptor, ...
Authors:Mayer, M.L.
Deposit date:2004-02-05
Release date:2005-02-08
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structures of the GluR5 and GluR6 ligand binding cores: molecular mechanisms underlying kainate receptor selectivity.
Neuron, 45, 2005
2AH2
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Trypanosoma cruzi trans-sialidase in complex with 2,3-difluorosialic acid (covalent intermediate)
Descriptor: 5-acetamido-3,5-dideoxy-3-fluoro-D-erythro-alpha-L-manno-non-2-ulopyranosonic acid, CHLORIDE ION, GLYCEROL, ...
Authors:Amaya, M.F, Watts, A.G, Damager, I, Wehenkel, A, Nguyen, T, Buschiazzo, A, Paris, G, Frasch, A.C, Withers, S.G, Alzari, P.M.
Deposit date:2005-07-27
Release date:2005-08-23
Last modified:2021-10-20
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structural Insights into the Catalytic Mechanism of Trypanosoma cruzi trans-Sialidase
Structure, 12, 2004
1S7Y
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Crystal structure of the GluR6 ligand binding core in complex with glutamate at 1.75 A resolution orthorhombic form
Descriptor: GLUTAMIC ACID, Glutamate receptor, ionotropic kainate 2 precursor
Authors:Mayer, M.L.
Deposit date:2004-01-30
Release date:2005-02-08
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Crystal structures of the GluR5 and GluR6 ligand binding cores: Molecular mechanisms underlying kainate receptor selectivity
Neuron, 45, 2005
2A75
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Trypanosoma rangeli Sialidase In Complex With 2,3- Difluorosialic Acid (Covalent Intermediate)
Descriptor: 5-acetamido-3,5-dideoxy-3-fluoro-D-erythro-alpha-L-manno-non-2-ulopyranosonic acid, SULFATE ION, sialidase
Authors:Amaya, M.F, Alzari, P.M, Buschiazzo, A.
Deposit date:2005-07-04
Release date:2005-11-22
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structural and Kinetic Analysis of Two Covalent Sialosyl-Enzyme Intermediates on Trypanosoma rangeli Sialidase.
J.Biol.Chem., 281, 2006
2AGS
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BU of 2ags by Molmil
Trypanosoma rangeli Sialidase in Complex with 2-Keto-3-deoxy-D-glycero-D-galacto-2,3-difluoro-nononic acid (2,3-difluoro-KDN)
Descriptor: 3-deoxy-3-fluoro-D-erythro-alpha-L-manno-non-2-ulopyranosonic acid, SULFATE ION, sialidase
Authors:Amaya, M.F, Alzari, P.M, Buschiazzo, A.
Deposit date:2005-07-27
Release date:2005-11-22
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural and Kinetic Analysis of Two Covalent Sialosyl-Enzyme Intermediates on Trypanosoma rangeli Sialidase.
J.Biol.Chem., 281, 2006
4UQQ
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Electron density map of GluK2 desensitized state in complex with 2S,4R-4-methylglutamate
Descriptor: GLUTAMATE RECEPTOR IONOTROPIC, KAINATE 2, GLUTAMIC ACID
Authors:Meyerson, J.R, Kumar, J, Chittori, S, Rao, P, Pierson, J, Bartesaghi, A, Mayer, M.L, Subramaniam, S.
Deposit date:2014-06-24
Release date:2014-08-13
Last modified:2024-10-23
Method:ELECTRON MICROSCOPY (7.6 Å)
Cite:Structural Mechanism of Glutamate Receptor Activation and Desensitization
Nature, 514, 2014
2OPU
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Solution NMR Structure of the First Domain of KSRP
Descriptor: KHSRP protein
Authors:Diaz-Moreno, I, Ramos, A, Garcia-Mayoral, M.F, Hollingworth, D.
Deposit date:2007-01-30
Release date:2008-02-26
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Phosphorylation-mediated unfolding of a KH domain regulates KSRP localization via 14-3-3 binding.
Nat.Struct.Mol.Biol., 16, 2009
2OPV
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Solution NMR Structure of the Second Domain of KSRP
Descriptor: KHSRP protein
Authors:Diaz-Moreno, I, Ramos, A, Garcia-Mayoral, M.F, Hollingworth, D.
Deposit date:2007-01-30
Release date:2008-02-26
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:The NMR Structures of the N-terminal Domains of KSRP
To be Published
6Z0P
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BceF Tyrosine Kinase Domain
Descriptor: ADENOSINE-5'-DIPHOSPHATE, BceF
Authors:Landau, M, Mayer, M, Abd Alhadi, M, Dvir, H.
Deposit date:2020-05-10
Release date:2021-04-14
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structural and Functional Insights into the Biofilm-Associated BceF Tyrosine Kinase Domain from Burkholderia cepacia .
Biomolecules, 11, 2021
5IU9
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Crystal Structure of Zebrafish Protocadherin-19 EC1-4
Descriptor: CALCIUM ION, Protocadherin-19 isoform 1, SODIUM ION
Authors:Cooper, S.R, Jontes, J.D, Sotomayor, M.
Deposit date:2016-03-17
Release date:2016-11-02
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (3.59 Å)
Cite:Structural determinants of adhesion by Protocadherin-19 and implications for its role in epilepsy.
Elife, 5, 2016
4UQJ
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Cryo-EM density map of GluA2em in complex with ZK200775
Descriptor: GLUTAMATE RECEPTOR 2, {[7-morpholin-4-yl-2,3-dioxo-6-(trifluoromethyl)-3,4-dihydroquinoxalin-1(2H)-yl]methyl}phosphonic acid
Authors:Meyerson, J.R, Kumar, J, Chittori, S, Rao, P, Pierson, J, Bartesaghi, A, Mayer, M.L, Subramaniam, S.
Deposit date:2014-06-24
Release date:2014-08-13
Last modified:2017-08-02
Method:ELECTRON MICROSCOPY (10.4 Å)
Cite:Structural Mechanism of Glutamate Receptor Activation and Desensitization
Nature, 514, 2014
4UQK
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Electron density map of GluA2em in complex with quisqualate and LY451646
Descriptor: (S)-2-AMINO-3-(3,5-DIOXO-[1,2,4]OXADIAZOLIDIN-2-YL)-PROPIONIC ACID, GLUTAMATE RECEPTOR 2
Authors:Meyerson, J.R, Kumar, J, Chittori, S, Rao, P, Pierson, J, Bartesaghi, A, Mayer, M.L, Subramaniam, S.
Deposit date:2014-06-24
Release date:2014-08-13
Last modified:2017-08-02
Method:ELECTRON MICROSCOPY (16.4 Å)
Cite:Structural Mechanism of Glutamate Receptor Activation and Desensitization
Nature, 514, 2014
4CU2
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C-terminal domain of CTP1L endolysin mutant V195P that reduces autoproteolysis
Descriptor: ENDOLYSIN
Authors:Dunne, M, Mertens, H.D.T, Garefalaki, V, Jeffries, C.M, Thompson, A, Lemke, E.A, Svergun, D.I, Mayer, M.J, Narbad, A, Meijers, R.
Deposit date:2014-03-16
Release date:2014-08-06
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.11 Å)
Cite:The Cd27L and Ctp1L Endolysins Targeting Clostridia Contain a Built-in Trigger and Release Factor.
Plos Pathog., 10, 2014
4CU5
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C-terminal domain of endolysin from phage CD27L is a trigger and release factor
Descriptor: ENDOLYSIN
Authors:Dunne, M, Mertens, H.D.T, Garefalaki, V, Jeffries, C.M, Thompson, A, Lemke, E.A, Svergun, D.I, Mayer, M.J, Narbad, A, Meijers, R.
Deposit date:2014-03-17
Release date:2014-08-06
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.24 Å)
Cite:The Cd27L and Ctp1L Endolysins Targeting Clostridia Contain a Built-in Trigger and Release Factor.
Plos Pathog., 10, 2014
6E8F
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BU of 6e8f by Molmil
Crystal Structure of Human Protocadherin-15 EC3-5 CD2-1
Descriptor: CALCIUM ION, Protocadherin-15, SODIUM ION
Authors:Choudhary, D, Tamilselvan, E, Sotomayor, M.
Deposit date:2018-07-29
Release date:2019-07-31
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.99 Å)
Cite:Structural determinants of protocadherin-15 mechanics and function in hearing and balance perception.
Proc.Natl.Acad.Sci.USA, 2020
6EB5
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Crystal Structure of Human Protocadherin-15 EC2-3 V250N
Descriptor: CALCIUM ION, Protocadherin-15
Authors:Choudhary, D, Sotomayor, M.
Deposit date:2018-08-04
Release date:2019-08-21
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural determinants of protocadherin-15 mechanics and function in hearing and balance perception.
Proc.Natl.Acad.Sci.USA, 2020
5IVU
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Crystal Structure of Streptomyces griseoflavus Cofilin
Descriptor: Cofilin
Authors:Schwebach, C, Sotomayor, M, Kudryashov, D.S.
Deposit date:2016-03-21
Release date:2017-03-29
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.42 Å)
Cite:Crystal Structure of Streptomyces griseoflavus Cofilin
To Be Published
1TT8
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CHORISMATE LYASE WITH PRODUCT, 1.0 A RESOLUTION
Descriptor: Chorismate-pyruvate lyase, P-HYDROXYBENZOIC ACID
Authors:Gallagher, D.T, Mayhew, M, Holden, M.J, Vilker, V, Howard, A.
Deposit date:2004-06-22
Release date:2004-12-28
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1 Å)
Cite:Structural analysis of ligand binding and catalysis in chorismate lyase.
Arch.Biochem.Biophys., 445, 2006

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