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PDB: 1205 件

2GN1
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Crystal structure of dimeric biodegradative threonine deaminase (TdcB) from Salmonella typhimurium at 2.2A resolution (Triclinic form with one dimer of TdcB in the asymmetric unit)
分子名称: SODIUM ION, Threonine dehydratase catabolic
著者Simanshu, D.K, Savithri, H.S, Murthy, M.R.N.
登録日2006-04-09
公開日2006-11-07
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal structures of Salmonella typhimurium biodegradative threonine deaminase and its complex with CMP provide structural insights into ligand-induced oligomerization and enzyme activation.
J.Biol.Chem., 281, 2006
8CHX
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Structure and function of LolA from Vibrio cholerae
分子名称: Outer-membrane lipoprotein carrier protein, ZINC ION
著者Jaiman, D, Nagampalli, R, Persson, K.
登録日2023-02-08
公開日2023-06-21
最終更新日2024-06-19
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献A comparative analysis of lipoprotein transport proteins: LolA and LolB from Vibrio cholerae and LolA from Porphyromonas gingivalis.
Sci Rep, 13, 2023
8CM1
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Lol B - Localization of lipoprotein B from Vibrio cholera
分子名称: Outer-membrane lipoprotein LolB
著者Jaiman, D, Persson, K.
登録日2023-02-17
公開日2023-06-21
最終更新日2024-06-19
実験手法X-RAY DIFFRACTION (1.46 Å)
主引用文献A comparative analysis of lipoprotein transport proteins: LolA and LolB from Vibrio cholerae and LolA from Porphyromonas gingivalis.
Sci Rep, 13, 2023
1O87
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A new MgGDP complex of the Ffh NG domain
分子名称: CHLORIDE ION, FORMIC ACID, GUANOSINE-5'-DIPHOSPHATE, ...
著者Freymann, D.M.
登録日2002-11-25
公開日2004-01-02
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Novel Protein and Mg2+ Configurations in the Mg2+Gdp Complex of the Srp Gtpase Ffh
Proteins: Struct.,Funct., Genet., 54, 2004
2GN2
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Crystal structure of tetrameric biodegradative threonine deaminase (TdcB) from Salmonella typhimurium in complex with CMP at 2.5A resolution (Hexagonal form)
分子名称: CYTIDINE-5'-MONOPHOSPHATE, SODIUM ION, Threonine dehydratase catabolic
著者Simanshu, D.K, Savithri, H.S, Murthy, M.R.N.
登録日2006-04-09
公開日2006-11-07
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal structures of Salmonella typhimurium biodegradative threonine deaminase and its complex with CMP provide structural insights into ligand-induced oligomerization and enzyme activation.
J.Biol.Chem., 281, 2006
2GN0
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Crystal structure of dimeric biodegradative threonine deaminase (TdcB) from Salmonella typhimurium at 1.7 A resolution (Triclinic form with one complete subunit built in alternate conformation)
分子名称: SODIUM ION, Threonine dehydratase catabolic
著者Simanshu, D.K, Savithri, H.S, Murthy, M.R.
登録日2006-04-09
公開日2006-11-07
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Crystal structures of Salmonella typhimurium biodegradative threonine deaminase and its complex with CMP provide structural insights into ligand-induced oligomerization and enzyme activation.
J.Biol.Chem., 281, 2006
1VSG
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2.9 ANGSTROMS RESOLUTION STRUCTURE OF THE N-TERMINAL DOMAIN OF A VARIANT SURFACE GLYCOPROTEIN FROM TRYPANOSOMA BRUCEI
分子名称: VARIANT SURFACE GLYCOPROTEIN MITAT 1.2, alpha-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
著者Freymann, D, Down, J, Wiley, D.C.
登録日1990-10-22
公開日1992-01-15
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献2.9 A resolution structure of the N-terminal domain of a variant surface glycoprotein from Trypanosoma brucei.
J.Mol.Biol., 216, 1990
1N39
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Structural and biochemical exploration of a critical amino acid in human 8-oxoguanine glycosylase
分子名称: CALCIUM ION, DNA complement strand, DNA inhibitor strand, ...
著者Norman, D.P, Chung, S.J, Verdine, G.L.
登録日2002-10-25
公開日2003-03-04
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural and biochemical exploration of a critical amino acid in human 8-oxoguanine glycosylase
Biochemistry, 42, 2003
2MN5
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NMR structure of Copsin
分子名称: Copsin
著者Hofmann, D, Wider, G, Essig, A, Aebi, M.
登録日2014-03-28
公開日2014-10-29
最終更新日2019-12-25
実験手法SOLUTION NMR
主引用文献Copsin, a Novel Peptide-based Fungal Antibiotic Interfering with the Peptidoglycan Synthesis.
J.Biol.Chem., 289, 2014
1O5Q
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Crystal Structure of Pyruvate and Mg2+ bound 2-methylisocitrate lyase (PrpB) from Salmonella typhimurium
分子名称: MAGNESIUM ION, PYRUVIC ACID, Probable methylisocitrate lyase
著者Simanshu, D.K, Murthy, M.R.N.
登録日2003-10-04
公開日2003-11-25
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal structure of Salmonella typhimurium 2-methylisocitrate lyase (PrpB) and its complex with pyruvate and Mg(2+)
Biochem.Biophys.Res.Commun., 311, 2003
2BIY
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Structure of PDK1-S241A mutant kinase domain
分子名称: 3-PHOSPHOINOSITIDE DEPENDENT PROTEIN KINASE-1, ADENOSINE-5'-TRIPHOSPHATE, GLYCEROL, ...
著者Komander, D, Kular, G.S, Deak, M, Alessi, D.R, van Aalten, D.M.F.
登録日2005-01-26
公開日2005-02-23
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Role of T-loop phosphorylation in PDK1 activation, stability, and substrate binding.
J. Biol. Chem., 280, 2005
3ML3
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Crystal structure of the IcsA autochaperone region
分子名称: Outer membrane protein icsA autotransporter
著者Diezmann, D, Kuhnel, K.
登録日2010-04-16
公開日2011-03-02
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal Structure of the Autochaperone Region from the Shigella flexneri Autotransporter IcsA
J.Bacteriol., 193, 2011
4GS4
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Structure of the alpha-tubulin acetyltransferase, alpha-TAT1
分子名称: ACETYL COENZYME *A, Alpha-tubulin N-acetyltransferase
著者Friedmann, D.R, Fan, J, Marmorstein, R.
登録日2012-08-27
公開日2012-10-17
最終更新日2013-08-28
実験手法X-RAY DIFFRACTION (2.112 Å)
主引用文献Structure of the alpha-tubulin acetyltransferase, alpha TAT1, and implications for tubulin-specific acetylation.
Proc.Natl.Acad.Sci.USA, 109, 2012
6NEF
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Outer Membrane Cytochrome S Filament from Geobacter Sulfurreducens
分子名称: C-type cytochrome OmcS, HEME C, MAGNESIUM ION
著者Filman, D.J, Marino, S.F, Ward, J.E, Yang, L, Mester, Z, Bullitt, E, Lovley, D.R, Strauss, M.
登録日2018-12-17
公開日2019-07-03
最終更新日2019-09-11
実験手法ELECTRON MICROSCOPY (3.42 Å)
主引用文献Cryo-EM reveals the structural basis of long-range electron transport in a cytochrome-based bacterial nanowire.
Commun Biol, 2, 2019
1UJQ
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Crystal structure of 2-methylisocitrate lyase (PrpB) from Salmonella enterica serovar typhimurium
分子名称: Probable methylisocitrate lyase
著者Simanshu, D.K, Murthy, M.R.N.
登録日2003-08-11
公開日2003-09-02
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal structure of Salmonella typhimurium 2-methylisocitrate lyase (PrpB) and its complex with pyruvate and Mg(2+)
Biochem.Biophys.Res.Commun., 311, 2003
1UU8
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Structure of human PDK1 kinase domain in complex with BIM-1
分子名称: 3-PHOSPHOINOSITIDE DEPENDENT PROTEIN KINASE-1, 3-{1-[3-(DIMETHYLAMINO)PROPYL]-1H-INDOL-3-YL}-4-(1H-INDOL-3-YL)-1H-PYRROLE-2,5-DIONE, GLYCEROL, ...
著者Komander, D, Kular, G.S, Schuttelkopf, A.W, Deak, M, Prakash, K.R, Bain, J, Elliot, M, Garrido-Franco, M, Kozikowski, A.P, Alessi, D.R, Van Aalten, D.M.F.
登録日2003-12-16
公開日2004-03-04
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Interactions of Ly333531 and Other Bisindolyl Maleimide Inhibitors with Pdk1
Structure, 12, 2004
1TBP
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BU of 1tbp by Molmil
CRYSTAL STRUCTURE OF YEAST TATA-BINDING PROTEIN AND MODEL FOR INTERACTION WITH DNA
分子名称: TATA-BINDING PROTEIN
著者Chasman, D.I, Flaherty, K.M, Sharp, P.A, Kornberg, R.D.
登録日1993-08-02
公開日1994-01-31
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Crystal structure of yeast TATA-binding protein and model for interaction with DNA.
Proc.Natl.Acad.Sci.USA, 90, 1993
1N3A
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Structural and biochemical exploration of a critical amino acid in human 8-oxoguanine glycosylase
分子名称: CALCIUM ION, DNA complement strand, DNA inhibitor strand, ...
著者Norman, D.P, Chung, S.J, Verdine, G.L.
登録日2002-10-25
公開日2003-03-04
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural and biochemical exploration of a critical amino acid in human 8-oxoguanine glycosylase
Biochemistry, 42, 2003
1N3C
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Structural and biochemical exploration of a critical amino acid in human 8-oxoguanine glycosylase
分子名称: 8-oxoG-containing DNA, CALCIUM ION, DNA complement strand, ...
著者Norman, D.P, Chung, S.J, Verdine, G.L.
登録日2002-10-25
公開日2003-03-04
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structural and biochemical exploration of a critical amino acid in human 8-oxoguanine glycosylase
Biochemistry, 42, 2003
1UU9
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Structure of human PDK1 kinase domain in complex with BIM-3
分子名称: 3-PHOSPHOINOSITIDE DEPENDENT PROTEIN KINASE-1, 3-[1-(3-AMINOPROPYL)-1H-INDOL-3-YL]-4-(1H-INDOL-3-YL)-1H-PYRROLE-2,5-DIONE, GLYCEROL, ...
著者Komander, D, Kular, G.S, Schuttelkopf, A.W, Deak, M, Prakash, K.R, Bain, J, Elliot, M, Garrido-Franco, M, Kozikowski, A.P, Alessi, D.R, Van Aalten, D.M.F.
登録日2003-12-16
公開日2004-03-04
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Interactions of Ly333531 and Other Bisindolyl Maleimide Inhibitors with Pdk1
Structure, 12, 2004
1UU7
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Structure of human PDK1 kinase domain in complex with BIM-2
分子名称: 3-(1H-INDOL-3-YL)-4-(1-{2-[(2S)-1-METHYLPYRROLIDINYL]ETHYL}-1H-INDOL-3-YL)-1H-PYRROLE-2,5-DIONE, 3-PHOSPHOINOSITIDE DEPENDENT PROTEIN KINASE-1, GLYCEROL, ...
著者Komander, D, Kular, G.S, Schuttelkopf, A.W, Deak, M, Prakash, K.R, Bain, J, Elliot, M, Garrido-Franco, M, Kozikowski, A.P, Alessi, D.R, Van Aalten, D.M.F.
登録日2003-12-16
公開日2004-03-04
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Interactions of Ly333531 and Other Bisindolyl Maleimide Inhibitors with Pdk1
Structure, 12, 2004
1UVR
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Structure of human PDK1 kinase domain in complex with BIM-8
分子名称: 3-PHOSPHOINOSITIDE DEPENDENT PROTEIN KINASE-1, 3-[1-(3-AMINOPROPYL)-1H-INDOL-3-YL]-4-(1-METHYL-1H-INDOL-3-YL)-1H-PYRROLE-2,5-DIONE, GLYCEROL, ...
著者Komander, D, Garrido-Franco, M, Kular, G.S, Schuttelkopf, A.W, Deak, M, Prakash, K.R, Bain, J, Elliot, M, Kozikowski, A.P, Alessi, D.R, Van Aalten, D.M.F.
登録日2004-01-22
公開日2004-03-04
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.81 Å)
主引用文献Interactions of Ly333531 and Other Bisindolyl Maleimide Inhibitors with Pdk1
Structure, 12, 2004
1UU3
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Structure of human PDK1 kinase domain in complex with LY333531
分子名称: (9R)-9-[(DIMETHYLAMINO)METHYL]-6,7,10,11-TETRAHYDRO-9H,18H-5,21:12,17-DIMETHENODIBENZO[E,K]PYRROLO[3,4-H][1,4,13]OXADIA ZACYCLOHEXADECINE-18,20-DIONE, 3-PHOSPHOINOSITIDE DEPENDENT PROTEIN KINASE-1, GLYCEROL, ...
著者Komander, D, Kular, G.S, Schuttelkopf, A.W, Deak, M, Prakash, K.R, Bain, J, Elliot, M, Garrido-Franco, M, Kozikowski, A.P, Alessi, D.R, Van Aalten, D.M.F.
登録日2003-12-15
公開日2004-03-04
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Interactions of Ly333531 and Other Bisindolyl Maleimide Inhibitors with Pdk1
Structure, 12, 2004
1W1G
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Crystal Structure of the PDK1 Pleckstrin Homology (PH) domain bound to DiC4-phosphatidylinositol (3,4,5)-trisphosphate
分子名称: (2R)-3-{[(S)-{[(2S,3R,5S,6S)-2,6-DIHYDROXY-3,4,5-TRIS(PHOSPHONOOXY)CYCLOHEXYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-2-(1-HYDROXY BUTOXY)PROPYL BUTYRATE, 3-PHOSPHOINOSITIDE DEPENDENT PROTEIN KINASE-1
著者Komander, D, Deak, M, Alessi, D.R, Van Aalten, D.M.F.
登録日2004-06-21
公開日2004-11-19
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Structural Insights Into the Regulation of Pdk1 by Phosphoinositides and Inositol Phosphates
Embo J., 23, 2004
1DIV
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RIBOSOMAL PROTEIN L9
分子名称: RIBOSOMAL PROTEIN L9
著者Hoffman, D.W, Cameron, C, Davies, C, Gerchman, S.E, Kycia, J.H, Porter, S, Ramakrishnan, V, White, S.W.
登録日1996-07-02
公開日1997-01-11
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Crystal structure of prokaryotic ribosomal protein L9: a bi-lobed RNA-binding protein.
EMBO J., 13, 1994

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