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PDB: 1214 results

1F2Z
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BU of 1f2z by Molmil
SIMPLIFICATION OF A PROTEIN LOOP IN STAPHYLOCOCCAL NUCLEASE
Descriptor: STAPHYLOCOCCAL NUCLEASE
Authors:Hodel, A, Harkins, P.C, Adelman, D.M, White, M.A, Fox, R.O.
Deposit date:2000-05-31
Release date:2003-09-16
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Simplification of a Protein Loop in Staphylococcal Nuclease
To be Published
3UN2
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BU of 3un2 by Molmil
Phosphopentomutase T85Q variant enzyme
Descriptor: GLYCEROL, MANGANESE (II) ION, Phosphopentomutase
Authors:Iverson, T.M, Birmingham, W.R, Panosian, T.D, Nannemann, D.P, Bachmann, B.O.
Deposit date:2011-11-15
Release date:2012-02-29
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Molecular Differences between a Mutase and a Phosphatase: Investigations of the Activation Step in Bacillus cereus Phosphopentomutase.
Biochemistry, 51, 2012
2KDF
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BU of 2kdf by Molmil
NMR structure of minor S5a (196-306):K48 linked diubiquitin species
Descriptor: 26S proteasome non-ATPase regulatory subunit 4, Ubiquitin
Authors:Zhang, N, Wang, Q, Ehlinger, A, Randles, L, Lary, J.W, Kang, Y, Haririnia, A, Cole, J.L, Fushman, D, Walters, K.J.
Deposit date:2009-01-06
Release date:2009-09-01
Last modified:2022-03-16
Method:SOLUTION NMR
Cite:Structure of the s5a:k48-linked diubiquitin complex and its interactions with rpn13.
Mol.Cell, 35, 2009
1EV1
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BU of 1ev1 by Molmil
ECHOVIRUS 1
Descriptor: ECHOVIRUS 1, MYRISTIC ACID, PALMITIC ACID
Authors:Wien, M.W, Filman, D.J, Hogle, J.M.
Deposit date:1997-12-02
Release date:1999-01-27
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (3.55 Å)
Cite:Structure determination of echovirus 1.
Acta Crystallogr.,Sect.D, 54, 1998
1P83
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BU of 1p83 by Molmil
NMR STRUCTURE OF 1-25 FRAGMENT OF MYCOBACTERIUM TUBERCULOSIS CPN10
Descriptor: 10 kDa chaperonin
Authors:Ciutti, A, Spiga, O, Giannozzi, E, Scarselli, M, Di Maro, D, Calamandrei, D, Niccolai, N, Bernini, A.
Deposit date:2003-05-06
Release date:2003-05-27
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution Structure of 1-25 fragment of Cpn10 from Mycobacterium Tuberculosis
To be Published
1FE0
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BU of 1fe0 by Molmil
CRYSTAL STRUCTURE OF CADMIUM-HAH1
Descriptor: CADMIUM ION, COPPER TRANSPORT PROTEIN ATOX1, SULFATE ION, ...
Authors:Wernimont, A.K, Huffman, D.L, Lamb, A.L, O'Halloran, T.V, Rosenzweig, A.C.
Deposit date:2000-07-20
Release date:2001-01-20
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Structural basis for copper transfer by the metallochaperone for the Menkes/Wilson disease proteins.
Nat.Struct.Biol., 7, 2000
1P82
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BU of 1p82 by Molmil
NMR STRUCTURE OF 1-25 FRAGMENT OF MYCOBACTERIUM TUBERCULOSIS CPN10
Descriptor: 10 kDa chaperonin
Authors:Ciutti, A, Spiga, O, Giannozzi, E, Scarselli, M, Di Maro, D, Calamandrei, D, Niccolai, N, Bernini, A.
Deposit date:2003-05-06
Release date:2003-05-27
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution Structure of 1-25 fragment of Cpn10 from Mycobacterium Tuberculosis
To be Published
2MBQ
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BU of 2mbq by Molmil
K11-linked Diubiquitin average solution structure at pH 6.8, 150 mM NaCl
Descriptor: Ubiquitin
Authors:Castaneda, C.A, Fushman, D.
Deposit date:2013-08-03
Release date:2013-09-04
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Unique structural, dynamical, and functional properties of k11-linked polyubiquitin chains.
Structure, 21, 2013
2MBO
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K11-linked Diubiquitin average solution structure at pH 6.8, 0 mM NaCl
Descriptor: Ubiquitin
Authors:Castaneda, C.A, Fushman, D.
Deposit date:2013-08-02
Release date:2013-09-04
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Unique structural, dynamical, and functional properties of k11-linked polyubiquitin chains.
Structure, 21, 2013
2KHC
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BU of 2khc by Molmil
Bruno RRM3+
Descriptor: Testis-specific RNP-type RNA binding protein
Authors:Lyon, A.M, Reveal, B.S, Macdonald, P.M, Hoffman, D.W.
Deposit date:2009-04-01
Release date:2009-12-22
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Bruno protein contains an expanded RNA recognition motif.
Biochemistry, 48, 2009
2EGS
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BU of 2egs by Molmil
Crystal structure of Leu261 to Met mutant of Diphthine synthase
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, GLYCEROL, S-ADENOSYL-L-HOMOCYSTEINE, ...
Authors:Mizutani, H, Matsuura, Y, Krishna Swamy, B.S, Simanshu, D.K, Murthy, M.R.N, Kunishima, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-03-02
Release date:2007-09-04
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of diphthine synthase from Pyrococcus horikoshii OT3
To be Published
2EGL
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BU of 2egl by Molmil
Crystal structure of Glu171 to Lys mutant of Diphthine synthase
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, GLYCEROL, S-ADENOSYL-L-HOMOCYSTEINE, ...
Authors:Mizutani, H, Matsuura, Y, Krishna Swamy, B.S, Simanshu, D.K, Murthy, M.R.N, Kunishima, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-03-01
Release date:2007-09-04
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of diphthine synthase from Pyrococcus horikoshii OT3
To be Published
2AKA
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BU of 2aka by Molmil
Structure of the nucleotide-free myosin II motor domain from Dictyostelium discoideum fused to the GTPase domain of dynamin 1 from Rattus norvegicus
Descriptor: Dynamin-1, LINKER, myosin II heavy chain
Authors:Reubold, T.F, Eschenburg, S, Becker, A, Leonard, M, Schmid, S.L, Vallee, R.B, Kull, F.J, Manstein, D.J.
Deposit date:2005-08-03
Release date:2005-08-23
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of the GTPase domain of rat dynamin 1.
Proc.Natl.Acad.Sci.Usa, 102, 2005
2AXP
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BU of 2axp by Molmil
X-Ray Crystal Structure of Protein BSU20280 from Bacillus subtilis. Northeast Structural Genomics Consortium Target SR256.
Descriptor: hypothetical protein BSU20280
Authors:Forouhar, F, Abashidze, M, Friedman, D, Vorobiev, S.M, Kuzin, A.P, Ciao, M, Conover, K, Acton, T.B, Montelione, G.T, Tong, L, Hunt, J.F, Northeast Structural Genomics Consortium (NESG)
Deposit date:2005-09-05
Release date:2005-09-13
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal Structure of the Hypothetical Protein BSU20280 from Bacillus subtilis, NESG target SR256
To be Published
2QKA
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BU of 2qka by Molmil
Structural and Kinetic Study of the Differences between Human and E.coli Manganese Superoxide Dismutases
Descriptor: MANGANESE (II) ION, Superoxide dismutase [Mn]
Authors:Zheng, J, Domsic, J.F, Cabelli, D, McKenna, R, Silverman, D.N.
Deposit date:2007-07-10
Release date:2008-07-29
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural and kinetic study of differences between human and Escherichia coli manganese superoxide dismutases.
Biochemistry, 46, 2007
7S6O
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BU of 7s6o by Molmil
The crystal structure of Lys48-linked di-ubiquitin
Descriptor: ACETATE ION, Ubiquitin
Authors:Osipiuk, J, Tesar, C, Lanham, B.T, Wydorski, P, Fushman, D, Joachimiak, L, Joachimiak, A.
Deposit date:2021-09-14
Release date:2021-09-22
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Dual domain recognition determines SARS-CoV-2 PLpro selectivity for human ISG15 and K48-linked di-ubiquitin.
Nat Commun, 14, 2023
6U9I
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BU of 6u9i by Molmil
Crystal structure of BvnE pinacolase from Penicillium brevicompactum
Descriptor: BvnE, DI(HYDROXYETHYL)ETHER, GLYCEROL
Authors:Ye, Y, Du, L, Zhang, X, Newmister, S.A, McCauley, M, Alegre-Requena, J.V, Zhang, W, Mu, S, Minami, A, Fraley, A.E, Adrover-Castellano, M.L, Carney, N, Shende, V.V, Oikawa, H, Kato, H, Tsukamoto, S, Paton, R.S, Williams, R.M, Sherman, D.H, Li, S.
Deposit date:2019-09-09
Release date:2020-09-09
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.777 Å)
Cite:Fungal-derived brevianamide assembly by a stereoselective semipinacolase.
Nat Catal, 3, 2020
6ARK
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BU of 6ark by Molmil
Crystal Structure of compound 10 covalently bound to K-Ras G12C
Descriptor: (3R)-N-(6-bromonaphthalen-2-yl)-3-hydroxy-1-propanoyl-L-prolinamide, GLYCEROL, GTPase KRas, ...
Authors:Nnadi, C.I, Jenkins, M.L, Gentile, D.R, Bateman, L.A, Zaidman, D, Balius, T.E, Nomura, D.K, Burke, J.E, Shokat, K.M, London, N.
Deposit date:2017-08-22
Release date:2018-01-31
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Novel K-Ras G12C Switch-II Covalent Binders Destabilize Ras and Accelerate Nucleotide Exchange.
J Chem Inf Model, 58, 2018
1RIP
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BU of 1rip by Molmil
RIBOSOMAL PROTEIN S17: CHARACTERIZATION OF THE THREE-DIMENSIONAL STRUCTURE BY 1H-AND 15N-NMR
Descriptor: RIBOSOMAL PROTEIN S17
Authors:Golden, B.L, Hoffman, D.W, Ramakrishnan, V, White, S.W.
Deposit date:1993-08-17
Release date:1993-10-31
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Ribosomal protein S17: characterization of the three-dimensional structure by 1H and 15N NMR.
Biochemistry, 32, 1993
7S3T
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BU of 7s3t by Molmil
NzeB Diketopiperazine Dimerase Mutant: Q68I-G87A-A89G-I90V
Descriptor: (3S,8aS)-3-(1H-indol-3-ylmethyl)hexahydropyrrolo[1,2-a]pyrazine-1,4-dione, 1,2-ETHANEDIOL, MAGNESIUM ION, ...
Authors:Harris, N.R, Shende, V.V, Sanders, J.N, Newmister, S.A, Khatri, Y, Movassaghi, M, Houk, K.N, Sherman, D.H.
Deposit date:2021-09-08
Release date:2022-10-05
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Molecular Dynamics Simulations Guide Chimeragenesis and Engineered Control of Chemoselectivity in Diketopiperazine Dimerases.
Angew.Chem.Int.Ed.Engl., 2023
1CC8
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BU of 1cc8 by Molmil
CRYSTAL STRUCTURE OF THE ATX1 METALLOCHAPERONE PROTEIN
Descriptor: BENZAMIDINE, MERCURY (II) ION, PROTEIN (METALLOCHAPERONE ATX1)
Authors:Rosenzweig, A.C, Huffman, D.L, Pufahl, M.Y.R.A, Hou, T.V.O, Wernimont, A.K.
Deposit date:1999-03-04
Release date:1999-12-12
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.02 Å)
Cite:Crystal structure of the Atx1 metallochaperone protein at 1.02 A resolution.
Structure Fold.Des., 7, 1999
7S3J
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BU of 7s3j by Molmil
Crystal Structure of AspB P450 in complex with brevianamide F substrates
Descriptor: (3S,8aS)-3-(1H-indol-3-ylmethyl)hexahydropyrrolo[1,2-a]pyrazine-1,4-dione, AspB, GLYCEROL, ...
Authors:Newmister, S.A, Shende, V.V, Harris, N.R, Sanders, J.N, Khatri, Y, Movassaghi, M, Houk, K.N, Sherman, D.H.
Deposit date:2021-09-07
Release date:2022-11-09
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:Molecular Dynamics Simulations Guide Chimeragenesis and Engineered Control of Chemoselectivity in Diketopiperazine Dimerases.
Angew.Chem.Int.Ed.Engl., 62, 2023
7SWO
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BU of 7swo by Molmil
C98C7 Fab in complex with SARS-CoV-2 Spike 6P (RBD local reconstruction)
Descriptor: C98C7 Fab heavy chain, C98C7 Fab light chain, Spike protein S1
Authors:Windsor, I.W, Tong, P, Wesemann, D.R, Harrison, S.C.
Deposit date:2021-11-20
Release date:2022-04-27
Last modified:2022-11-09
Method:ELECTRON MICROSCOPY (4.1 Å)
Cite:Antibodies induced by an ancestral SARS-CoV-2 strain that cross-neutralize variants from Alpha to Omicron BA.1.
Sci Immunol, 7, 2022
7SWN
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BU of 7swn by Molmil
G32A4 Fab in complex with SARS-CoV-2 Spike 6P (RBD local reconstruction)
Descriptor: G32A4 Fab heavy chain, G32A4 Fab light chain, Spike protein S1
Authors:Windsor, I.W, Tong, P, Wesemann, D.R, Harrison, S.C.
Deposit date:2021-11-20
Release date:2022-04-27
Last modified:2022-11-09
Method:ELECTRON MICROSCOPY (4.3 Å)
Cite:Antibodies induced by an ancestral SARS-CoV-2 strain that cross-neutralize variants from Alpha to Omicron BA.1.
Sci Immunol, 7, 2022
7TBK
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BU of 7tbk by Molmil
Composite structure of the dilated human nuclear pore complex (NPC) symmetric core generated with a 37A in situ cryo-ET map of CD4+ T cell NPC
Descriptor: NUP107 CTD, NUP107 NTD, NUP133, ...
Authors:Petrovic, S, Samanta, D, Perriches, T, Bley, C.J, Thierbach, K, Brown, B, Nie, S, Mobbs, G.W, Stevens, T.A, Liu, X, Tomaleri, G.P, Schaus, L, Hoelz, A.
Deposit date:2021-12-22
Release date:2022-06-15
Last modified:2022-06-22
Method:ELECTRON MICROSCOPY (37 Å)
Cite:Architecture of the linker-scaffold in the nuclear pore.
Science, 376, 2022

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