Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 51787 results

1OQS
DownloadVisualize
BU of 1oqs by Molmil
Crystal Structure of RV4/RV7 Complex
Descriptor: Phospholipase A2 RV-4, Phospholipase A2 RV-7
Authors:Perbandt, M, Betzel, C.
Deposit date:2003-03-11
Release date:2003-09-30
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure of the heterodimeric neurotoxic complex viperotoxin F (RV-4/RV-7) from the venom of Vipera russelli formosensis at 1.9 A resolution.
Acta Crystallogr.,Sect.D, 59, 2003
2D0O
DownloadVisualize
BU of 2d0o by Molmil
Structure of diol dehydratase-reactivating factor complexed with ADP and Mg2+
Descriptor: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, SULFATE ION, ...
Authors:Shibata, N, Mori, K, Hieda, N, Higuchi, Y, Yamanishi, M, Toraya, T.
Deposit date:2005-08-05
Release date:2006-02-28
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Release of a damaged cofactor from a coenzyme B12-dependent enzyme: X-ray structures of diol dehydratase-reactivating factor
Structure, 13, 2005
1P6V
DownloadVisualize
BU of 1p6v by Molmil
Crystal structure of the tRNA domain of transfer-messenger RNA in complex with SmpB
Descriptor: 45-MER, SsrA-binding protein
Authors:Gutmann, S, Haebel, P.W, Metzinger, L, Sutter, M, Felden, B, Ban, N.
Deposit date:2003-04-30
Release date:2003-08-12
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Crystal structure of the transfer-RNA domain of transfer-messenger RNA in complex with SmpB
Nature, 424, 2003
1JQX
DownloadVisualize
BU of 1jqx by Molmil
The R57A mutant of Lactococcus lactis dihydroorotate dehydrogenase A
Descriptor: FLAVIN MONONUCLEOTIDE, GLYCEROL, MAGNESIUM ION, ...
Authors:Norager, S, Arent, S, Bjornberg, O, Ottosen, M, Lo Leggio, L, Jensen, K.F, Larsen, S.
Deposit date:2001-08-09
Release date:2003-09-09
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Lactococcus lactis dihydroorotate dehydrogenase A mutants reveal important facets of the enzymatic function
J.Biol.Chem., 278, 2003
1JRC
DownloadVisualize
BU of 1jrc by Molmil
The N67A mutant of Lactococcus lactis dihydroorotate dehydrogenase A
Descriptor: FLAVIN MONONUCLEOTIDE, OROTIC ACID, dihydroorotate dehydrogenase A
Authors:Norager, S, Arent, S, Bjornberg, O, Ottosen, M, Lo Leggio, L, Jensen, K.F, Larsen, S.
Deposit date:2001-08-13
Release date:2003-09-09
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Lactococcus lactis dihydroorotate dehydrogenase A mutants reveal important facets of the enzymatic function
J.Biol.Chem., 278, 2003
2CZ7
DownloadVisualize
BU of 2cz7 by Molmil
Fe-type NHase photo-activated for 75min at 105K
Descriptor: FE (III) ION, MAGNESIUM ION, NITRIC OXIDE, ...
Authors:Nojiri, M, Kawano, Y, Hashimoto, K, Kamiya, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-07-11
Release date:2006-01-11
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Active Center Structures of Photo-reactive Nitrile Hydratase during its Photo-activation Process
To be Published
4M3F
DownloadVisualize
BU of 4m3f by Molmil
Rapid and efficient design of new inhibitors of Mycobacterium tuberculosis transcriptional repressor EthR using fragment growing, merging and linking approaches
Descriptor: HTH-type transcriptional regulator EthR, N-(3-methylbutyl)-4-(2-methyl-1,3-thiazol-4-yl)benzenesulfonamide
Authors:Villemagne, B, Flipo, M, Blondiaux, N, Crauste, C, Malaquin, S, Leroux, F, Piveteau, C, Villeret, V, Brodin, P, Villoutreix, B, Sperandio, O, Wohlkonig, A, Wintjens, R, Deprez, B, Baulard, A, Willand, N.
Deposit date:2013-08-06
Release date:2014-06-25
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2 Å)
Cite:Ligand Efficiency Driven Design of New Inhibitors of Mycobacterium tuberculosis Transcriptional Repressor EthR Using Fragment Growing, Merging, and Linking Approaches.
J.Med.Chem., 57, 2014
1CZY
DownloadVisualize
BU of 1czy by Molmil
CRYSTAL STRUCTURE OF THE COMPLEX BETWEEN THE TRAF DOMAIN OF HUMAN TRAF2 AND AN LMP1 BINDING PEPTIDE
Descriptor: LATENT MEMBRANE PROTEIN 1, TUMOR NECROSIS FACTOR RECEPTOR ASSOCIATED PROTEIN 2
Authors:Ye, H, Park, Y.C, Kreishman, M, Kieff, E, Wu, H.
Deposit date:1999-09-07
Release date:2000-03-08
Last modified:2018-01-31
Method:X-RAY DIFFRACTION (2 Å)
Cite:The structural basis for the recognition of diverse receptor sequences by TRAF2.
Mol.Cell, 4, 1999
1CP7
DownloadVisualize
BU of 1cp7 by Molmil
AMINOPEPTIDASE FROM STREPTOMYCES GRISEUS
Descriptor: AMINOPEPTIDASE, CALCIUM ION, ZINC ION
Authors:Gilboa, R, Greenblatt, H.M, Perach, M, Spungin-Bialik, A, Lessel, U, Schomburg, D, Blumberg, S, Shoham, G.
Deposit date:1999-06-10
Release date:2000-05-03
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.58 Å)
Cite:Interactions of Streptomyces griseus aminopeptidase with a methionine product analogue: a structural study at 1.53 A resolution.
Acta Crystallogr.,Sect.D, 56, 2000
1PA3
DownloadVisualize
BU of 1pa3 by Molmil
Crystal Structure of Glutathione-S-transferase from Plasmodium falciparum
Descriptor: Glutathione s-transferase, putative
Authors:Perbandt, M, Betzel, C, Liebau, E.
Deposit date:2003-05-13
Release date:2003-11-25
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Native and inhibited structure of a Mu class-related glutathione S-transferase from Plasmodium falciparum
J.Biol.Chem., 279, 2004
1JT3
DownloadVisualize
BU of 1jt3 by Molmil
Human Acidic Fibroblast Growth Factor. 141 Amino Acid Form with Amino Histidine Tag AND LEU 73 REPLACED BY VAL (L73V)
Descriptor: SULFATE ION, acidic fibroblast growth factor
Authors:Brych, S.R, Blaber, S.I, Logan, T.M, Blaber, M.
Deposit date:2001-08-20
Release date:2001-12-19
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structure and stability effects of mutations designed to increase the primary sequence symmetry within the core region of a beta-trefoil.
Protein Sci., 10, 2001
1CPN
DownloadVisualize
BU of 1cpn by Molmil
NATIVE-LIKE IN VIVO FOLDING OF A CIRCULARLY PERMUTED JELLYROLL PROTEIN SHOWN BY CRYSTAL STRUCTURE ANALYSIS
Descriptor: CALCIUM ION, CIRCULARLY PERMUTED
Authors:Hahn, M, Heinemann, U.
Deposit date:1994-03-11
Release date:1994-06-22
Last modified:2019-08-14
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Native-like in vivo folding of a circularly permuted jellyroll protein shown by crystal structure analysis.
Proc.Natl.Acad.Sci.USA, 91, 1994
4M9F
DownloadVisualize
BU of 4m9f by Molmil
Dengue virus NS2B-NS3 protease A125C variant at pH 8.5
Descriptor: NS2B-NS3 protease
Authors:Yildiz, M, Ghosh, S, Bell, J.A, Sherman, W, Hardy, J.A.
Deposit date:2013-08-14
Release date:2013-11-27
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Allosteric Inhibition of the NS2B-NS3 Protease from Dengue Virus.
Acs Chem.Biol., 8, 2013
1OQU
DownloadVisualize
BU of 1oqu by Molmil
A protein coordinated tri-nuclear Fe complex formed during soaking of crystals of the ribonucleotide reductase R2F protein from Corynebacterium Ammoniagenes
Descriptor: ACETATE ION, FE (III) ION, OXYGEN MOLECULE, ...
Authors:Hogbom, M, Nordlund, P.
Deposit date:2003-03-11
Release date:2004-04-20
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:A protein carboxylate coordinated oxo-centered tri-nuclear iron complex with possible implications for ferritin mineralization
Febs Lett., 567, 2004
1ORY
DownloadVisualize
BU of 1ory by Molmil
FLAGELLAR EXPORT CHAPERONE IN COMPLEX WITH ITS COGNATE BINDING PARTNER
Descriptor: Flagellin, PHOSPHATE ION, flagellar protein FliS
Authors:Evdokimov, A.G, Phan, J, Tropea, J.E, Routzahn, K.M, Peters III, H.K, Pokross, M, Waugh, D.S.
Deposit date:2003-03-17
Release date:2003-09-16
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Similar modes of polypeptide recognition by export chaperones in flagellar biosynthesis and type III secretion
Nat.Struct.Biol., 10, 2003
2CKA
DownloadVisualize
BU of 2cka by Molmil
Solution structures of the BRK domains of the human Chromo Helicase Domain 7 and 8, reveals structural similarity with GYF domain suggesting a role in protein interaction
Descriptor: CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 8
Authors:Ab, E, de Jong, R.N, Diercks, T, Xiaoyun, J, Daniels, M, Kaptein, R, Folkers, G.E.
Deposit date:2006-04-14
Release date:2007-05-08
Last modified:2024-06-19
Method:SOLUTION NMR
Cite:Solution Structures of the Brk Domains of the Human Chromo Helicase Domain 7 and 8, Reveals Structural Similarity with Gyf Domain Suggesting a Role in Protein Interaction
To be Published
1JUE
DownloadVisualize
BU of 1jue by Molmil
1.8 A resolution structure of native lactococcus lactis dihydroorotate dehydrogenase A
Descriptor: ACETIC ACID, FLAVIN MONONUCLEOTIDE, GLYCEROL, ...
Authors:Norager, S, Arent, S, Bjornberg, O, Ottosen, M, Lo Leggio, L, Jensen, K.F, Larsen, S.
Deposit date:2001-08-24
Release date:2003-09-09
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Lactococcus lactis dihydroorotate dehydrogenase A mutants reveal important facets of the enzymatic function
J.Biol.Chem., 278, 2003
1D4K
DownloadVisualize
BU of 1d4k by Molmil
HIV-1 PROTEASE COMPLEXED WITH A MACROCYCLIC PEPTIDOMIMETIC INHIBITOR
Descriptor: HIV-1 PROTEASE, N-13-[(10S,13S)-9,12-DIOXO-10-(2-BUTYL)-2-OXA-8,11-DIAZABICYCLO [13.2.2] NONADECA-15,17,18-TRIENE] (2R)-BENZYL-(4S)-HYDROXY-5-AMINOPENTANOIC (1R)-HYDROXY-(2S)-INDANEAMIDE, SULFATE ION
Authors:Tyndall, J.D, Reid, R.C, Tyssen, D.P, Jardine, D.K, Todd, B, Passmore, M, March, D.R, Pattenden, L.K, Alewood, D, Hu, S.H, Alewood, P.F, Birch, C.J, Martin, J.L, Fairlie, D.P.
Deposit date:1999-10-04
Release date:2000-10-11
Last modified:2021-11-03
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Synthesis, stability, antiviral activity, and protease-bound structures of substrate-mimicking constrained macrocyclic inhibitors of HIV-1 protease.
J.Med.Chem., 43, 2000
2C6Z
DownloadVisualize
BU of 2c6z by Molmil
crystal structure of dimethylarginine dimethylaminohydrolase I in complex with citrulline
Descriptor: CITRIC ACID, CITRULLINE, NG, ...
Authors:Frey, D, Braun, O, Briand, C, Vasak, M, Grutter, M.G.
Deposit date:2005-11-16
Release date:2006-05-17
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Structure of the Mammalian Nos Regulator Dimethylarginine Dimethylaminohydrolase: A Basis for the Design of Specific Inbitors
Structure, 14, 2006
1CRL
DownloadVisualize
BU of 1crl by Molmil
INSIGHTS INTO INTERFACIAL ACTIVATION FROM AN 'OPEN' STRUCTURE OF CANDIDA RUGOSA LIPASE
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, LIPASE
Authors:Grochulski, P, Cygler, M.
Deposit date:1993-03-02
Release date:1994-01-31
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.06 Å)
Cite:Insights into interfacial activation from an open structure of Candida rugosa lipase.
J.Biol.Chem., 268, 1993
1OTV
DownloadVisualize
BU of 1otv by Molmil
PqqC, Pyrroloquinolinquinone Synthase C
Descriptor: Coenzyme PQQ synthesis protein C
Authors:Magnusson, O.T, Toyama, H, Saeki, M, Rojas, A, Reed, J.C, Adachi, O, Klinman, J.P, SChwarzenbacher, R.
Deposit date:2003-03-23
Release date:2004-05-11
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Quinone Biogenesis: Structure and Mechanism of PqqC, the Final Catalyst in the Production of Pyrroloquinoline Quinone.
Proc.Natl.Acad.Sci.USA, 101, 2004
1CS7
DownloadVisualize
BU of 1cs7 by Molmil
SYNTHETIC DNA HAIRPIN WITH STILBENEDIETHER LINKER
Descriptor: 5'-D(GP*(BRU)P*TP*TP*TP*GP*(S02)*CP*AP*AP*AP*AP*C)-3', STRONTIUM ION
Authors:Lewis, F.D, Liu, X, Wu, Y, Miller, S.E, Wasielewski, M.R, Letsinger, R.L, Sanishvili, R, Joachimiak, A, Tereshko, V, Egli, M.
Deposit date:1999-08-17
Release date:2001-10-19
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Structure and Photoinduced Electron Transfer in Exceptionally Stable Synthetic DNA Hairpins with Stilbenediether Linkers
J.Am.Chem.Soc., 121, 1999
4M9I
DownloadVisualize
BU of 4m9i by Molmil
A125C NS2B-NS3 protease from dengue virus at pH 5.5
Descriptor: NS2B-NS3 protease
Authors:Yildiz, M, Hardy, J.A.
Deposit date:2013-08-14
Release date:2013-11-27
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Allosteric Inhibition of the NS2B-NS3 Protease from Dengue Virus.
Acs Chem.Biol., 8, 2013
1JWL
DownloadVisualize
BU of 1jwl by Molmil
Structure of the Dimeric lac Repressor/Operator O1/ONPF Complex
Descriptor: 2-nitrophenyl beta-D-fucopyranoside, 5'-D(*AP*GP*AP*AP*T*TP*GP*TP*GP*AP*GP*CP*GP*GP*AP*TP*AP*AP*CP*AP*AP*TP*T)-3', 5'-D(*TP*AP*AP*TP*TP*GP*TP*TP*AP*TP*CP*CP*GP*CP*TP*CP*AP*CP*AP*AP*TP*TP*C)-3', ...
Authors:Bell, C.E, Lewis, M.
Deposit date:2001-09-04
Release date:2001-10-05
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (4 Å)
Cite:Crystallographic analysis of Lac repressor bound to natural operator O1.
J.Mol.Biol., 312, 2001
1OZ7
DownloadVisualize
BU of 1oz7 by Molmil
Crystal structure of Echicetin from the venom of Indian saw-scaled viper (Echis carinatus) at 2.4 resolution
Descriptor: echicetin A-chain, echicetin B-chain
Authors:Jasti, J, Paramasivam, M, Srinivasan, A, Singh, T.P.
Deposit date:2003-04-08
Release date:2003-12-30
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of echicetin from Echis carinatus (Indian saw-scaled viper) at 2.4A resolution.
J.Mol.Biol., 335, 2004

224931

PDB entries from 2024-09-11

PDB statisticsPDBj update infoContact PDBjnumon