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PDB: 51689 results

2O1Y
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Solution structure of the anti-apoptotic protein Bcl-xL in complex with an acyl-sulfonamide-based ligand
Descriptor: 3-NITRO-N-{4-[2-(2-PHENYLETHYL)-1,3-BENZOTHIAZOL-5-YL]BENZOYL}-4-{[2-(PHENYLSULFANYL)ETHYL]AMINO}BENZENESULFONAMIDE, Apoptosis regulator Bcl-X
Authors:Bruncko, M, Oost, T.K, Belli, B.A, Ding, H, Joseph, M.K, Kunzer, A, Martineau, D, McClellan, W.J, Mitten, M, Ng, S.C, Nimmer, P.M, Oltersdorf, T, Park, C.M, Petros, A.M, Shoemaker, A.R, Song, X, Wang, X, Wendt, M.D, Zhang, H, Fesik, S.W, Rosenberg, S.H, Elmore, S.W.
Deposit date:2006-11-29
Release date:2007-02-27
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Studies Leading to Potent, Dual Inhibitors of Bcl-2 and Bcl-xL.
J.Med.Chem., 50, 2007
5NU5
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BU of 5nu5 by Molmil
Crystal structure of the human bromodomain of EP300 bound to the inhibitor XDM-CBP
Descriptor: 1,2-ETHANEDIOL, Histone acetyltransferase p300, ~{N}-[[2,8-bis(oxidanyl)naphthalen-1-yl]methyl]-4-ethanoyl-3-ethyl-5-methyl-1~{H}-pyrrole-2-carboxamide
Authors:Huegle, M, Wohlwend, D.
Deposit date:2017-04-28
Release date:2017-08-16
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Beyond the BET Family: Targeting CBP/p300 with 4-Acyl Pyrroles.
Angew. Chem. Int. Ed. Engl., 56, 2017
5HDA
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BU of 5hda by Molmil
Crystal Structure of the BS69 coiled coil-MYND domains bound to an EBNA2 PXLXP motif
Descriptor: Epstein-Barr nuclear antigen 2, ZINC ION, Zinc finger MYND domain-containing protein 11
Authors:Song, J, Harter, M.
Deposit date:2016-01-05
Release date:2016-01-20
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.3899 Å)
Cite:BS69/ZMYND11 C-Terminal Domains Bind and Inhibit EBNA2.
Plos Pathog., 12, 2016
2O3P
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BU of 2o3p by Molmil
Crystal structure of Pim1 with Quercetin
Descriptor: 3,5,7,3',4'-PENTAHYDROXYFLAVONE, IMIDAZOLE, Proto-oncogene serine/threonine-protein kinase Pim-1
Authors:Holder, S, Zemskova, M, Zhang, C, Tabrizizad, M, Bremer, R, Neidigh, J.W, Lilly, M.B.
Deposit date:2006-12-01
Release date:2007-02-13
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.24 Å)
Cite:Characterization of a potent and selective small-molecule inhibitor of the PIM1 kinase.
Mol.Cancer Ther., 6, 2007
2O4I
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BU of 2o4i by Molmil
Structure of TREX1 in complex with DNA
Descriptor: 5'-D(*GP*CP*TP*AP*GP*GP*CP*AP*GP*GP*AP*AP*CP*CP*CP*CP*TP*CP*CP*TP*CP*CP*CP*CP*T)-3', Three prime repair exonuclease 1
Authors:Brucet, M, Macias, M.J, Fita, I, Celada, A.
Deposit date:2006-12-04
Release date:2007-03-13
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Structure of the dimeric exonuclease TREX1 in complex with DNA displays a proline-rich binding site for WW Domains.
J.Biol.Chem., 282, 2007
7FTI
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BU of 7fti by Molmil
Crystal Structure of human cyclic GMP-AMP synthase in complex with 5-(4-fluorophenyl)-2-methylpyrazole-3-carboxylic acid
Descriptor: 3-(4-fluorophenyl)-1-methyl-1H-pyrazole-5-carboxylic acid, Cyclic GMP-AMP synthase, ZINC ION
Authors:Leibrock, L, Benz, J, Groebke-Zbinden, K, Brunner, M, Rudolph, M.G.
Deposit date:2023-02-08
Release date:2024-02-21
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal Structure of a human cyclic GMP-AMP synthase complex
To be published
221L
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BU of 221l by Molmil
THE ENERGETIC COST AND THE STRUCTURAL CONSEQUENCES OF BURYING A HYDROXYL GROUP WITHIN THE CORE OF A PROTEIN DETERMINED FROM ALA TO SER AND VAL TO THR SUBSTITUTIONS IN T4 LYSOZYME
Descriptor: BETA-MERCAPTOETHANOL, CHLORIDE ION, T4 LYSOZYME
Authors:Blaber, M, Matthews, B.W.
Deposit date:1993-05-28
Release date:1994-01-31
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Energetic cost and structural consequences of burying a hydroxyl group within the core of a protein determined from Ala-->Ser and Val-->Thr substitutions in T4 lysozyme.
Biochemistry, 32, 1993
2O65
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Crystal structure of Pim1 with Pentahydroxyflavone
Descriptor: 5,7-DIHYDROXY-2-(3,4,5-TRIHYDROXYPHENYL)-4H-CHROMEN-4-ONE, IMIDAZOLE, Proto-oncogene serine/threonine-protein kinase Pim-1
Authors:Holder, S, Zemskova, M, Zhang, C, Tabrizizad, M, Bremer, R, Neidigh, J.W, Lilly, M.B.
Deposit date:2006-12-06
Release date:2007-02-13
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Characterization of a potent and selective small-molecule inhibitor of the PIM1 kinase.
Mol.Cancer Ther., 6, 2007
5DE0
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BU of 5de0 by Molmil
Dye-decolorizing protein from V. cholerae
Descriptor: Deferrochelatase, PROTOPORPHYRIN IX CONTAINING FE
Authors:Uchida, T, Sasaki, M, Tanaka, Y, Yao, M.
Deposit date:2015-08-25
Release date:2015-10-21
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.24 Å)
Cite:A Dye-Decolorizing Peroxidase from Vibrio cholerae.
Biochemistry, 54, 2015
6CW3
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BU of 6cw3 by Molmil
Crystal structure of a yeast SAGA transcriptional coactivator Ada2/Gcn5 HAT subcomplex, crystal form 2
Descriptor: Histone acetyltransferase GCN5, Transcriptional adapter 2, ZINC ION, ...
Authors:Sun, J, Paduch, M, Kim, S.A, Kramer, R.M, Barrios, A.F, Lu, V, Luke, J, Usatyuk, S, Kossiakoff, A.A, Tan, S.
Deposit date:2018-03-29
Release date:2018-09-19
Last modified:2020-03-04
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:Structural basis for activation of SAGA histone acetyltransferase Gcn5 by partner subunit Ada2.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
7FU3
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BU of 7fu3 by Molmil
Crystal Structure of human cyclic GMP-AMP synthase in complex with 8-chloro-2-(2-hydroxyphenyl)quinoline-4-carboxylic acid
Descriptor: (2P)-8-chloro-2-(2-hydroxyphenyl)quinoline-4-carboxylic acid, Cyclic GMP-AMP synthase, ZINC ION
Authors:Leibrock, L, Benz, J, Groebke-Zbinden, K, Brunner, M, Rudolph, M.G.
Deposit date:2023-02-08
Release date:2024-02-21
Method:X-RAY DIFFRACTION (1.822 Å)
Cite:Crystal Structure of a human cyclic GMP-AMP synthase complex
To be published
3P8H
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BU of 3p8h by Molmil
Crystal structure of L3MBTL1 (MBT repeat) in complex with a nicotinamide antagonist
Descriptor: 3-bromo-5-[(4-pyrrolidin-1-ylpiperidin-1-yl)carbonyl]pyridine, GLYCEROL, Lethal(3)malignant brain tumor-like protein, ...
Authors:Lam, R, Herold, J.M, Ouyang, H, Tempel, W, Gao, C, Ravichandran, M, Senisterra, G, Bountra, C, Weigelt, J, Arrowsmith, C.H, Edwards, A.M, Vedadi, M, Kireev, D, Frye, S.V, Brown, P.J, Structural Genomics Consortium (SGC)
Deposit date:2010-10-13
Release date:2010-11-03
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Small-molecule ligands of methyl-lysine binding proteins.
J.Med.Chem., 54, 2011
2O12
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BU of 2o12 by Molmil
Mycobacterium tuberculosis Chorismate synthase in complex with FMN
Descriptor: ACETATE ION, Chorismate synthase, FLAVIN MONONUCLEOTIDE, ...
Authors:Bruning, M, Bartunik, H.D.
Deposit date:2006-11-28
Release date:2008-04-08
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.72 Å)
Cite:Complexes of Chorismate synthase from M. tuberculosis
To be Published
7FUO
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BU of 7fuo by Molmil
Crystal Structure of human cyclic GMP-AMP synthase in complex with 2-[(2-chlorophenyl)methylamino]-5-[(2-fluoroanilino)methyl]-4H-[1,2,4]triazolo[1,5-a]pyrimidin-7-one
Descriptor: (8R)-2-{[(2-chlorophenyl)methyl]amino}-5-[(2-fluoroanilino)methyl][1,2,4]triazolo[1,5-a]pyrimidin-7(4H)-one, Cyclic GMP-AMP synthase, ZINC ION
Authors:Leibrock, L, Benz, J, Groebke-Zbinden, K, Brunner, M, Rudolph, M.G.
Deposit date:2023-02-08
Release date:2024-02-21
Method:X-RAY DIFFRACTION (1.81 Å)
Cite:Crystal Structure of a human cyclic GMP-AMP synthase complex
To be published
1V6J
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BU of 1v6j by Molmil
peanut lectin-lactose complex crystallized in orthorhombic form at acidic pH
Descriptor: CALCIUM ION, Galactose-binding lectin, MANGANESE (II) ION, ...
Authors:Kundhavai Natchiar, S, Arockia Jeyaprakash, A, Ramya, T.N.C, Thomas, C.J, Suguna, K, Surolia, A, Vijayan, M.
Deposit date:2003-12-01
Release date:2004-02-10
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structural plasticity of peanut lectin: an X-ray analysis involving variation in pH, ligand binding and crystal structure.
Acta Crystallogr.,Sect.D, 60, 2004
2PJQ
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BU of 2pjq by Molmil
Crystal structure of Q88U62_LACPL from Lactobacillus plantarum. Northeast Structural Genomics target LpR71
Descriptor: Uncharacterized protein lp_2664
Authors:Benach, J, Su, M, Seetharaman, J, Forouhar, F, Chen, C.X, Cunningham, K, Ma, L.-C, Owens, L, Baran, M, Acton, T.B, Montelione, G.T, Tong, L, Hunt, J.F, Northeast Structural Genomics Consortium (NESG)
Deposit date:2007-04-16
Release date:2007-05-01
Last modified:2018-01-24
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal structure of Q88U62_LACPL from Lactobacillus plantarum.
To be Published
2PLL
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BU of 2pll by Molmil
Crystal structure of perdeuterated human arginase I
Descriptor: 2(S)-AMINO-6-BORONOHEXANOIC ACID, MANGANESE (II) ION, arginase-1
Authors:Di Costanzo, L, Moulin, M, Haertlein, M, Meilleur, F, Christianson, D.W.
Deposit date:2007-04-19
Release date:2007-08-14
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Expression, purification, assay, and crystal structure of perdeuterated human arginase I
Arch.Biochem.Biophys., 465, 2007
2PMB
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BU of 2pmb by Molmil
Crystal structure of predicted nucleotide-binding protein from Vibrio cholerae
Descriptor: GLYCEROL, PHOSPHATE ION, Uncharacterized protein
Authors:Patskovsky, Y, Zhan, C, Shi, W, Toro, R, Sauder, J.M, Gilmore, J, Iizuka, M, Maletic, M, Gheyi, T, Wasserman, S.R, Smith, D, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2007-04-20
Release date:2007-05-08
Last modified:2021-02-03
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:Crystal Structure of Predicted Nucleotide-Binding Protein from Vibrio Cholerae.
To be Published
1LJH
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BU of 1ljh by Molmil
CRYSTAL STRUCTURE OF MONOCLINIC LYSOZYME GROWN IN PRESENCE OF 5% GLYCEROL
Descriptor: Lysozyme C, NITRATE ION
Authors:Saraswathi, N.T, Sankaranarayanan, R, Vijayan, M.
Deposit date:2002-04-21
Release date:2002-10-19
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Effect of stabilizing additives on the structure and hydration of proteins: a study involving monoclinic lysozyme.
Acta Crystallogr.,Sect.D, 58, 2002
5C5I
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BU of 5c5i by Molmil
Crystal structure of NADP-dependent dehydrogenase from Rhodobacter sphaeroides
Descriptor: NADP-dependent dehydrogenase
Authors:Kowiel, M, Gasiorowska, O.A, Shabalin, I.G, Handing, K.B, Porebski, P.J, Cymborowski, M, Al Obaidi, N.F, Bonanno, J, Almo, S.C, Minor, W, New York Structural Genomics Research Consortium (NYSGRC)
Deposit date:2015-06-19
Release date:2015-07-01
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structures of NADP-dependent dehydrogenase from Rhodobacter sphaeroides
to be published
6CT8
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BU of 6ct8 by Molmil
Selenomethionine structure of N-truncated R2-type pyocin tail fiber at 2.6 angstrom resolution
Descriptor: NICKEL (II) ION, R2-type pyocin
Authors:Salazar, A.J, Sherekar, M, Saccettini, J.C.
Deposit date:2018-03-22
Release date:2019-02-20
Method:X-RAY DIFFRACTION (2.62 Å)
Cite:R pyocin tail fiber structure reveals a receptor-binding domain with a lectin fold.
PLoS ONE, 14, 2019
6U0S
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BU of 6u0s by Molmil
Crystal structure of the flavin-dependent monooxygenase PieE in complex with FAD and substrate
Descriptor: 2,4-dichlorophenol 6-monooxygenase, 2-[(2E,5E,7E,9R,10R,11E)-10-hydroxy-3,7,9,11-tetramethyltrideca-2,5,7,11-tetraen-1-yl]-6-methoxy-3-methylpyridin-4-ol, CHLORIDE ION, ...
Authors:Shi, R, Manenda, M.
Deposit date:2019-08-14
Release date:2020-03-11
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.52 Å)
Cite:Structural analyses of the Group A flavin-dependent monooxygenase PieE reveal a sliding FAD cofactor conformation bridging OUT and IN conformations.
J.Biol.Chem., 295, 2020
6GHK
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BU of 6ghk by Molmil
Human PARP1 (ARTD1) - Catalytic domain in complex with inhibitor ME0527
Descriptor: Poly [ADP-ribose] polymerase 1, SULFATE ION, ~{N}-[(1~{R})-1-(4-imidazol-1-ylphenyl)ethyl]-3-(4-oxidanylidene-1~{H}-quinazolin-2-yl)propanamide
Authors:Karlberg, T, Thorsell, A.G, Lindgren, A.E.G, Moche, M, Brock, J, Ekblad, T, Spjut, S, Elofsson, M, Schuler, H.
Deposit date:2018-05-08
Release date:2019-05-22
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.28 Å)
Cite:Human PARP1 (ARTD1) - Catalytic domain in complex with inhibitor ME0527
To Be Published
1LJG
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BU of 1ljg by Molmil
CRYSTAL STRUCTURE OF MONOCLINIC LYSOZYME GROWN IN PRESENCE OF 5% GLYCEROL
Descriptor: Lysozyme C, NITRATE ION
Authors:Saraswathi, N.T, Sankaranarayanan, R, Vijayan, M.
Deposit date:2002-04-21
Release date:2002-10-19
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Effect of stabilizing additives on the structure and hydration of proteins: a study involving monoclinic lysozyme.
Acta Crystallogr.,Sect.D, 58, 2002
1XMG
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BU of 1xmg by Molmil
Crystal structure of apo methane monooxygenase hydroxylase from M. capsulatus (Bath)
Descriptor: CALCIUM ION, Methane monooxygenase component A alpha chain, Methane monooxygenase component A beta chain, ...
Authors:Sazinsky, M.H, Merkx, M, Cadieux, E, Tang, S, Lippard, S.J.
Deposit date:2004-10-02
Release date:2005-01-18
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Preparation and X-ray Structures of Metal-Free, Dicobalt and Dimanganese Forms of Soluble Methane Monooxygenase Hydroxylase from Methylococcus capsulatus (Bath)
Biochemistry, 43, 2004

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