Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 51689 results

1TF1
DownloadVisualize
BU of 1tf1 by Molmil
Crystal Structure of the E. coli Glyoxylate Regulatory Protein Ligand Binding Domain
Descriptor: Negative regulator of allantoin and glyoxylate utilization operons
Authors:Walker, J.R, Skarina, T, Kudrytska, M, Joachimiak, A, Arrowsmith, C, Edwards, A, Savchenko, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2004-05-26
Release date:2004-08-03
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural and biochemical study of effector molecule recognition by the E.coli glyoxylate and allantoin utilization regulatory protein AllR.
J.Mol.Biol., 358, 2006
6S15
DownloadVisualize
BU of 6s15 by Molmil
Pyridine derivative of the natural alkaloid Berberine as Human Telomeric G-quadruplex Binder
Descriptor: Berberine, DNA TAGGGTTAGGGT, POTASSIUM ION
Authors:Ferraroni, M, Bazzicalupi, C, Gratteri, P, Papi, F.
Deposit date:2019-06-18
Release date:2020-06-03
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Pyridine Derivative of the Natural Alkaloid Berberine as Human Telomeric G4-DNA Binder: A Solution and Solid-State Study.
Acs Med.Chem.Lett., 11, 2020
7D9H
DownloadVisualize
BU of 7d9h by Molmil
SpdH Spermidine dehydrogenase N33 truncation structure
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, GLYCEROL, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Che, S, Zhang, Q, Bartlam, M.
Deposit date:2020-10-13
Release date:2021-11-17
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.31 Å)
Cite:Structure of Pseudomonas aeruginosa spermidine dehydrogenase: a polyamine oxidase with a novel heme-binding fold.
Febs J., 289, 2022
6RJR
DownloadVisualize
BU of 6rjr by Molmil
Crystal structure of a Fungal Catalase at 1.9 Angstrom
Descriptor: CHLORIDE ION, Catalase, GLYCEROL, ...
Authors:Gomez, S, Navas-Yuste, S, Payne, A.M, Rivera, W, Lopez-Estepa, M, Brangbour, C, Fulla, D, Juanhuix, J, Fernandez, F.J, Vega, M.C.
Deposit date:2019-04-29
Release date:2020-03-11
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.895 Å)
Cite:Peroxisomal catalases from the yeasts Pichia pastoris and Kluyveromyces lactis as models for oxidative damage in higher eukaryotes.
Free Radic. Biol. Med., 141, 2019
7D9G
DownloadVisualize
BU of 7d9g by Molmil
SpdH Spermidine dehydrogenase native structure
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, PROTOPORPHYRIN IX CONTAINING FE, Spermidine dehydrogenase, ...
Authors:Che, S, Zhang, Q, Bartlam, M.
Deposit date:2020-10-13
Release date:2021-11-17
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structure of Pseudomonas aeruginosa spermidine dehydrogenase: a polyamine oxidase with a novel heme-binding fold.
Febs J., 289, 2022
6RKK
DownloadVisualize
BU of 6rkk by Molmil
Fragment AZ-021 binding at the p53pT387/14-3-3 sigma interface
Descriptor: 14-3-3 protein sigma, 4-phenyl-5-(phenylmethyl)thiophene-2-carboximidamide, CHLORIDE ION, ...
Authors:Genet, S, Wolter, M, Guillory, X, Somsen, B, Leysen, S, Patel, J, Castaldi, P, Ottmann, C.
Deposit date:2019-04-30
Release date:2020-06-17
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.88 Å)
Cite:Fragment-based Differential Targeting of PPI Stabilizer Interfaces.
J.Med.Chem., 63, 2020
6S24
DownloadVisualize
BU of 6s24 by Molmil
Crystal structure of the TgGalNAc-T3 in complex with UDP, manganese and the peptide 3
Descriptor: 2-acetamido-2-deoxy-beta-D-galactopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose, ALA-THR-GLY-ALA-GLY-ALA-GLY-ALA-GLY-THR-THR-PRO-GLY-PRO, ...
Authors:de las Rivas, M, Daniel, E.J.P, Narimatsu, Y, Companon, I, Kato, K, Hermosilla, P, Thureau, A, Ceballos-Laita, L, Coelho, H, Bernado, P, Marcelo, F, Hansen, L, Lostao, A, Corzana, F, Clausen, H, Gerken, T.A, Hurtado-Guerrero, R.
Deposit date:2019-06-20
Release date:2019-12-25
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.12 Å)
Cite:Molecular basis for fibroblast growth factor 23 O-glycosylation by GalNAc-T3.
Nat.Chem.Biol., 16, 2020
6RNQ
DownloadVisualize
BU of 6rnq by Molmil
Crystal structure of the dimerization domain of Gemin5 at 1.95 A
Descriptor: Gem-associated protein 5, POTASSIUM ION
Authors:Moreno-Morcillo, M, Ramon-Maiques, S, Martinez-Salas, E.
Deposit date:2019-05-09
Release date:2019-11-27
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structural basis for the dimerization of Gemin5 and its role in protein recruitment and translation control.
Nucleic Acids Res., 48, 2020
7DJI
DownloadVisualize
BU of 7dji by Molmil
Crystal structure of Lymnaea stagnalis Acetylcholine binding protein (AChBP) complexed with Paraherquamide A
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Acetylcholine-binding protein, Paraherquamide A
Authors:Ihara, M, Matsuda, K.
Deposit date:2020-11-20
Release date:2021-11-24
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Determinants of subtype-selectivity of the anthelmintic paraherquamide A on Caenorhabditis elegans nicotinic acetylcholine receptors.
Mol.Pharmacol., 2023
1WMY
DownloadVisualize
BU of 1wmy by Molmil
Crystal Structure of C-type Lectin CEL-I from Cucumaria echinata
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, CALCIUM ION, lectin CEL-I, ...
Authors:Sugawara, H, Kusunoki, M, Kurisu, G, Fujimoto, T, Aoyagi, H, Hatakeyama, T.
Deposit date:2004-07-22
Release date:2004-09-07
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2 Å)
Cite:Characteristic Recognition of N-Acetylgalactosamine by an Invertebrate C-type Lectin, CEL-I, Revealed by X-ray Crystallographic Analysis
J.Biol.Chem., 279, 2004
1WDM
DownloadVisualize
BU of 1wdm by Molmil
fatty acid beta-oxidation multienzyme complex from Pseudomonas fragi, form I (native3)
Descriptor: 3-ketoacyl-CoA thiolase, ACETYL COENZYME *A, Fatty oxidation complex alpha subunit, ...
Authors:Ishikawa, M, Tsuchiya, D, Oyama, T, Tsunaka, Y, Morikawa, K.
Deposit date:2004-05-17
Release date:2004-07-27
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (3.8 Å)
Cite:Structural basis for channelling mechanism of a fatty acid beta-oxidation multienzyme complex
Embo J., 23, 2004
6RS7
DownloadVisualize
BU of 6rs7 by Molmil
X-ray crystal structure of LsAA9B (deglycosylated form)
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, AA9, ...
Authors:Frandsen, K.E.H, Tovborg, M, Poulsen, J.C.N, Johansen, K.S, Lo Leggio, L.
Deposit date:2019-05-21
Release date:2019-09-11
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Insights into an unusual Auxiliary Activity 9 family member lacking the histidine brace motif of lytic polysaccharide monooxygenases.
J.Biol.Chem., 294, 2019
6RSX
DownloadVisualize
BU of 6rsx by Molmil
Regulatory Subunit of cAMP-dependant Protein Kinase A from Euglena gracilis at 1.6 A resolution
Descriptor: ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE, Regulatory Subunit of Protein Kinase A (cAMP-dependent) from Euglena gracilis
Authors:Volpato Santos, Y, Ober, V, Basquin, J, Boshart, M.
Deposit date:2019-05-22
Release date:2020-10-28
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Regulatory Subunit of Protein Kinase A (cAMP-dependent) from Euglena gracilis at 1.6 A resolution
To Be Published
6RTF
DownloadVisualize
BU of 6rtf by Molmil
Structure of murine Solute Carrier 26 family member A9 (Slc26a9) anion transporter in an intermediate state
Descriptor: Solute carrier family 26 member 9,Solute carrier family 26 member 9
Authors:Sawicka, M, Walter, J.D, Dutzler, R.
Deposit date:2019-05-23
Release date:2019-07-24
Last modified:2024-05-22
Method:ELECTRON MICROSCOPY (7.77 Å)
Cite:Cryo-EM structures and functional characterization of murine Slc26a9 reveal mechanism of uncoupled chloride transport.
Elife, 8, 2019
6RKF
DownloadVisualize
BU of 6rkf by Molmil
Structure of human DASPO
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, D-aspartate oxidase, FLAVIN-ADENINE DINUCLEOTIDE, ...
Authors:Chaves-Sanjuan, A, Nardini, M.
Deposit date:2019-04-30
Release date:2020-03-11
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (3.219 Å)
Cite:Structure and kinetic properties of human d-aspartate oxidase, the enzyme-controlling d-aspartate levels in brain.
Faseb J., 34, 2020
7DLR
DownloadVisualize
BU of 7dlr by Molmil
Mycobacterium tuberculosis enolase mutant - E163A
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, CHLORIDE ION, ...
Authors:Ahmad, M, Biswal, B.K.
Deposit date:2020-11-30
Release date:2021-12-01
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Structural snapshots of Mycobacterium tuberculosis enolase reveal dual mode of 2PG binding and its implication in enzyme catalysis.
Iucrj, 10, 2023
6RM3
DownloadVisualize
BU of 6rm3 by Molmil
Evolutionary compaction and adaptation visualized by the structure of the dormant microsporidian ribosome
Descriptor: 16S rRNA, 23S rRNA, 5S rRNA, ...
Authors:Barandun, J, Hunziker, M, Vossbrinck, C.R, Klinge, S.
Deposit date:2019-05-05
Release date:2019-07-10
Last modified:2024-07-10
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Evolutionary compaction and adaptation visualized by the structure of the dormant microsporidian ribosome.
Nat Microbiol, 4, 2019
7DG6
DownloadVisualize
BU of 7dg6 by Molmil
Structure of SARS-Cov2-Mpro-1-302
Descriptor: Replicase polyprotein 1ab
Authors:Fu, Z, Liu, M, Huang, H.
Deposit date:2020-11-11
Release date:2021-12-01
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structure of SARS-CoV-2-Mpro-1-302
To Be Published
6RFL
DownloadVisualize
BU of 6rfl by Molmil
Structure of the complete Vaccinia DNA-dependent RNA polymerase complex
Descriptor: DNA-dependent RNA polymerase subunit rpo132, DNA-dependent RNA polymerase subunit rpo147, DNA-dependent RNA polymerase subunit rpo18, ...
Authors:Grimm, C, Hillen, S.H, Bedenk, K, Bartuli, J, Neyer, S, Zhang, Q, Huettenhofer, A, Erlacher, M, Dienemann, C, Schlosser, A, Urlaub, H, Boettcher, B, Szalay, A.A, Cramer, P, Fischer, U.
Deposit date:2019-04-15
Release date:2019-12-11
Last modified:2019-12-25
Method:ELECTRON MICROSCOPY (2.76 Å)
Cite:Structural Basis of Poxvirus Transcription: Vaccinia RNA Polymerase Complexes.
Cell, 179, 2019
7DLB
DownloadVisualize
BU of 7dlb by Molmil
Crassostrea gigas ferritin mutant-D119K
Descriptor: FE (III) ION, Ferritin
Authors:Li, H, Zang, J, Wang, Z, Du, M.
Deposit date:2020-11-26
Release date:2021-12-01
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.502 Å)
Cite:Crassostrea gigas ferritin mutant-D119K
To Be Published
7D8E
DownloadVisualize
BU of 7d8e by Molmil
Crystal Structure of double mutant Y115E Y117E human Secretory Glutaminyl Cyclase in complex with LSB-09
Descriptor: 1,2-ETHANEDIOL, Glutaminyl-peptide cyclotransferase, SULFATE ION, ...
Authors:Dileep, K.V, Ihara, K, Sakai, N, Shirozu, M, Zhang, K.Y.J.
Deposit date:2020-10-08
Release date:2021-12-08
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal Structure of double mutant Y115E Y117E human Secretory Glutaminyl Cyclase in complex with LSB-09
To Be Published
6RJZ
DownloadVisualize
BU of 6rjz by Molmil
Fragment AZ-015 binding at the p53pT387/14-3-3 sigma interface
Descriptor: 14-3-3 protein sigma, 7-(6-azanylpyridin-2-yl)-1-benzothiophene-2-carboximidamide, CHLORIDE ION, ...
Authors:Genet, S, Wolter, M, Guillory, X, Somsen, B, Leysen, S, Castaldi, P, Ottmann, C.
Deposit date:2019-04-29
Release date:2020-06-17
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.58 Å)
Cite:Fragment-based Differential Targeting of PPI Stabilizer Interfaces.
J.Med.Chem., 63, 2020
1T7B
DownloadVisualize
BU of 1t7b by Molmil
Crystal structure of mutant Lys8Gln of scorpion alpha-like neurotoxin BmK M1 from Buthus martensii Karsch
Descriptor: Alpha-like neurotoxin BmK-I
Authors:Xiang, Y, Guan, R.J, He, X.L, Wang, C.G, Wang, M, Zhang, Y, Sundberg, E.J, Wang, D.C.
Deposit date:2004-05-09
Release date:2004-09-07
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structural Mechanism Governing Cis and Trans Isomeric States and an Intramolecular Switch for Cis/Trans Isomerization of a Non-proline Peptide Bond Observed in Crystal Structures of Scorpion Toxins
J.Mol.Biol., 341, 2004
6RWI
DownloadVisualize
BU of 6rwi by Molmil
Fragment AZ-002 binding at the p53pT387/14-3-3 sigma interface
Descriptor: 14-3-3 protein sigma, 5-phenylthiophene-2-carboximidamide, CALCIUM ION, ...
Authors:Leysen, S, Guillory, X, Wolter, M, Genet, S, Somsen, B, Patel, J, Castaldi, P, Ottmann, C.
Deposit date:2019-06-05
Release date:2020-06-17
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Fragment-based Differential Targeting of PPI Stabilizer Interfaces.
J.Med.Chem., 63, 2020
6RWS
DownloadVisualize
BU of 6rws by Molmil
Fragment AZ-009 binding at the p53pT387/14-3-3 sigma interface
Descriptor: 14-3-3 protein sigma, 4-chloranyl-6-(sulfanylmethyl)-1-benzothiophene-2-carboximidamide, Cellular tumor antigen p53, ...
Authors:Leysen, S, Guillory, X, Wolter, M, Genet, S, Somsen, B, Patel, J, Castaldi, P, Ottmann, C.
Deposit date:2019-06-06
Release date:2020-06-17
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.53 Å)
Cite:Fragment-based Differential Targeting of PPI Stabilizer Interfaces.
J.Med.Chem., 63, 2020

224572

數據於2024-09-04公開中

PDB statisticsPDBj update infoContact PDBjnumon