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PDB: 51689 results

6Q2P
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BU of 6q2p by Molmil
Crystal structure of mouse viperin bound to cytidine triphosphate and S-adenosylhomocysteine
Descriptor: 2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CHLORIDE ION, CYTIDINE-5'-TRIPHOSPHATE, ...
Authors:Fenwick, M.K, Dong, M, Lin, H, Ealick, S.E.
Deposit date:2019-08-08
Release date:2020-01-22
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.452 Å)
Cite:Structural Basis of the Substrate Selectivity of Viperin.
Biochemistry, 59, 2020
7TDG
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BU of 7tdg by Molmil
Rabbit RyR1 with AMP-PCP and high Ca2+ embedded in nanodisc in inactivated conformation (Dataset-A)
Descriptor: (2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate, CALCIUM ION, PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER, ...
Authors:Nayak, A.R, Samso, M.
Deposit date:2021-12-31
Release date:2022-03-09
Last modified:2022-03-16
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Ca 2+ -inactivation of the mammalian ryanodine receptor type 1 in a lipidic environment revealed by cryo-EM.
Elife, 11, 2022
6W1V
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BU of 6w1v by Molmil
RT XFEL structure of the two-flash state of Photosystem II (2F, S3-rich) at 2.09 Angstrom resolution
Descriptor: 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE, ...
Authors:Ibrahim, M, Fransson, T, Chatterjee, R, Cheah, M.H, Hussein, R, Lassalle, L, Sutherlin, K.D, Young, I.D, Fuller, F.D, Gul, S, Kim, I.-S, Simon, P.S, de Lichtenberg, C, Chernev, P, Bogacz, I, Pham, C, Orville, A.M, Saichek, N, Northen, T.R, Batyuk, A, Carbajo, S, Alonso-Mori, R, Tono, K, Owada, S, Bhowmick, A, Bolotovski, R, Mendez, D, Moriarty, N.W, Holton, J.M, Dobbek, H, Brewster, A.S, Adams, P.D, Sauter, N.K, Bergmann, U, Zouni, A, Messinger, J, Kern, J, Yachandra, V.K, Yano, J.
Deposit date:2020-03-04
Release date:2020-06-03
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.09 Å)
Cite:Untangling the sequence of events during the S2→ S3transition in photosystem II and implications for the water oxidation mechanism.
Proc.Natl.Acad.Sci.USA, 117, 2020
6QAZ
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BU of 6qaz by Molmil
Crystal structure of gp41-1 intein
Descriptor: CITRATE ANION, DI(HYDROXYETHYL)ETHER, PENTAETHYLENE GLYCOL, ...
Authors:Mikula, K.M, Beyer, H.M, Li, M, Wlodawer, A, Iwai, H.
Deposit date:2018-12-20
Release date:2019-11-13
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.02 Å)
Cite:The crystal structure of the naturally split gp41-1 intein guides the engineering of orthogonal split inteins from cis-splicing inteins.
Febs J., 287, 2020
1C7R
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BU of 1c7r by Molmil
THE CRYSTAL STRUCTURE OF PHOSPHOGLUCOSE ISOMERASE/AUTOCRINE MOTILITY FACTOR/NEUROLEUKIN COMPLEXED WITH ITS CARBOHYDRATE PHOSPHATE INHIBITORS AND ITS SUBSTRATE RECOGNITION MECHANISM
Descriptor: 5-PHOSPHOARABINONIC ACID, PHOSPHOGLUCOSE ISOMERASE
Authors:Chou, C.-C, Meng, M, Sun, Y.-J, Hsiao, C.-D.
Deposit date:2000-03-02
Release date:2000-09-13
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:The crystal structure of phosphoglucose isomerase/autocrine motility factor/neuroleukin complexed with its carbohydrate phosphate inhibitors suggests its substrate/receptor recognition.
J.Biol.Chem., 275, 2000
6GL9
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BU of 6gl9 by Molmil
Crystal structure of JAK3 in complex with Compound 10 (FM475)
Descriptor: (~{E})-3-[3-(3-cyclohexyl-3,5,8,10-tetrazatricyclo[7.3.0.0^{2,6}]dodeca-1(9),2(6),4,7,11-pentaen-4-yl)phenyl]prop-2-enenitrile, 1,2-ETHANEDIOL, 1-phenylurea, ...
Authors:Chaikuad, A, Forster, M, von Delft, F, Edwards, A.M, Arrowsmith, C.H, Bountra, C, Laufer, S.A, Knapp, S, Structural Genomics Consortium (SGC)
Deposit date:2018-05-23
Release date:2018-06-27
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Development, Optimization, and Structure-Activity Relationships of Covalent-Reversible JAK3 Inhibitors Based on a Tricyclic Imidazo[5,4- d]pyrrolo[2,3- b]pyridine Scaffold.
J. Med. Chem., 61, 2018
6NP7
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BU of 6np7 by Molmil
Crystal structure of Trypanosoma cruzi bromodomain BDF2 (TcCLB.506553.20)
Descriptor: Bromodomain factor 2 protein
Authors:Lin, Y.H, Dong, A, Loppnau, P, Bountra, C, Arrowsmith, C.H, Edwards, A.M, Vedadi, M, Hui, R, Harding, R.J, Structural Genomics Consortium (SGC)
Deposit date:2019-01-17
Release date:2019-02-13
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.16 Å)
Cite:Crystal structure of Trypanosoma cruzi bromodomain BDF2 (TcCLB.506553.20)
to be published
6GM2
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BU of 6gm2 by Molmil
[FeFe]-hydrogenase CpI from Clostridium pasteurianum, variant E282D
Descriptor: FE2/S2 (INORGANIC) CLUSTER, IRON/SULFUR CLUSTER, Iron hydrogenase 1, ...
Authors:Duan, J, Esselborn, J, Hofmann, E, Winkler, M, Happe, T.
Deposit date:2018-05-24
Release date:2018-11-07
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.76 Å)
Cite:Crystallographic and spectroscopic assignment of the proton transfer pathway in [FeFe]-hydrogenases.
Nat Commun, 9, 2018
1SBU
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BU of 1sbu by Molmil
NMR structure of a peptide containing a dimetylthiazolidine : an analog of delta conotoxin EVIA loop 2
Descriptor: delta-conotoxin EVIA
Authors:Figuet, M, Chierici, S, Jourdan, M, Dumy, P.
Deposit date:2004-02-11
Release date:2004-02-24
Last modified:2020-06-24
Method:SOLUTION NMR
Cite:A case study of 2,2-dimethylthiazolidine as locked cis proline amide bond: synthesis, NMR and molecular modeling studies of a [small delta]-conotoxin EVIA peptide analog.
Org.Biomol.Chem., 2, 2004
6NZO
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BU of 6nzo by Molmil
Set2 bound to nucleosome
Descriptor: DNA (149-MER), Histone H2B 1.1, Histone H3, ...
Authors:Halic, M, Bilokapic, S.
Deposit date:2019-02-14
Release date:2019-08-28
Last modified:2019-09-04
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Nucleosome and ubiquitin position Set2 to methylate H3K36.
Nat Commun, 10, 2019
6PU1
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BU of 6pu1 by Molmil
Cysteine stabilized hexameric HIV-1 CA in complex with SEC24C peptide
Descriptor: CHLORIDE ION, Gag polyprotein, IODIDE ION, ...
Authors:Lindenberger, J.J, Kvaratskhelia, M.
Deposit date:2019-07-16
Release date:2021-01-06
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.28 Å)
Cite:Cysteine stabilized hexameric HIV-1 CA in complex with SEC24C peptide
To Be Published
1XKN
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BU of 1xkn by Molmil
Crystal Structure of the Putative Peptidyl-arginine Deiminase from Chlorobium tepidum, NESG Target CtR21
Descriptor: CHLORIDE ION, SODIUM ION, putative peptidyl-arginine deiminase
Authors:Forouhar, F, Befeler, A.R, Vorobiev, S.M, Hussain, M, Ciano, M, Acton, T.B, Montelione, G.T, Hunt, J.F, Tong, L, Northeast Structural Genomics Consortium (NESG)
Deposit date:2004-09-29
Release date:2004-11-16
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal Structure of the Putative Peptidyl-arginine Deiminase from Chlorobium tepidum, NESG Target CtR21
To be Published
6O0E
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BU of 6o0e by Molmil
Saxiphilin:STX complex, soaking
Descriptor: Saxiphilin, [(3aS,4R,10aS)-2,6-diamino-10,10-dihydroxy-3a,4,9,10-tetrahydro-3H,8H-pyrrolo[1,2-c]purin-4-yl]methyl carbamate
Authors:Yen, T.J, Lolicato, M, Minor, D.L.
Deposit date:2019-02-16
Release date:2019-07-10
Last modified:2019-12-04
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structure of the saxiphilin:saxitoxin (STX) complex reveals a convergent molecular recognition strategy for paralytic toxins.
Sci Adv, 5, 2019
6PUB
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BU of 6pub by Molmil
Crystal Structure of the Type B Chloramphenicol Acetyltransferase from Vibrio cholerae in the Complex with Crystal Violet
Descriptor: CHLORIDE ION, CRYSTAL VIOLET, Chloramphenicol acetyltransferase, ...
Authors:Kim, Y, Maltseva, N, Kuhn, M, Stam, J, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2019-07-18
Release date:2019-09-25
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.43 Å)
Cite:Crystal Structure of the Type B Chloramphenicol Acetyltransferase from Vibrio cholerae in the Complex with Crystal Violet
To Be Published
3NBD
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BU of 3nbd by Molmil
Clitocybe nebularis ricin B-like lectin (CNL) in complex with lactose, crystallized at pH 7.1
Descriptor: Ricin B-like lectin, SULFATE ION, beta-D-galactopyranose-(1-4)-alpha-D-glucopyranose
Authors:Renko, M, Pohleven, J, Sabotic, J, Kos, J, Turk, D.
Deposit date:2010-06-03
Release date:2011-09-21
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.15 Å)
Cite:Bivalent carbohydrate binding is required for biological activity of Clitocybe nebularis lectin (CNL), the N,N'-diacetyllactosediamine (GalNAc beta 1-4GlcNAc, LacdiNAc)-specific lectin from basidiomycete C. nebularis
J.Biol.Chem., 287, 2012
1C7Q
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BU of 1c7q by Molmil
THE CRYSTAL STRUCTURE OF PHOSPHOGLUCOSE ISOMERASE/AUTOCRINE MOTILITY FACTOR/NEUROLEUKIN COMPLEXED WITH ITS CARBOHYDRATE PHOSPHATE INHIBITORS AND ITS SUBSTRATE RECOGNITION MECHANISM
Descriptor: N-BROMOACETYL-AMINOETHYL PHOSPHATE, PHOSPHOGLUCOSE ISOMERASE
Authors:Chou, C.-C, Meng, M, Sun, Y.-J, Hsiao, C.-D.
Deposit date:2000-03-02
Release date:2000-09-13
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:The crystal structure of phosphoglucose isomerase/autocrine motility factor/neuroleukin complexed with its carbohydrate phosphate inhibitors suggests its substrate/receptor recognition.
J.Biol.Chem., 275, 2000
1CC1
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BU of 1cc1 by Molmil
CRYSTAL STRUCTURE OF A REDUCED, ACTIVE FORM OF THE NI-FE-SE HYDROGENASE FROM DESULFOMICROBIUM BACULATUM
Descriptor: CARBONMONOXIDE-(DICYANO) IRON, FE (II) ION, HYDROGENASE (LARGE SUBUNIT), ...
Authors:Garcin, E, Vernede, X, Hatchikian, E.C, Volbeda, A, Frey, M, Fontecilla-Camps, J.C.
Deposit date:1999-03-03
Release date:1999-06-01
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:The crystal structure of a reduced [NiFeSe] hydrogenase provides an image of the activated catalytic center
Structure Fold.Des., 7, 1999
6WI2
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BU of 6wi2 by Molmil
Structure of human mitochondrial complex Nfs1-ISCU2-ISD11 with E.coli ACP1 at 1.95 A resolution (NIAU)2. N-terminal mutation of ISCU2 (L35) traps Nfs1 Cys loop in the active site of ISCU2 without metal present.
Descriptor: 1,2-ETHANEDIOL, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 2-{2-[2-2-(METHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL, ...
Authors:Boniecki, M.T, Cygler, M.
Deposit date:2020-04-08
Release date:2020-04-22
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:The essential function of ISCU2 and its conserved N-terminus in Fe/S cluster biogenesis
To Be Published
6PVR
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BU of 6pvr by Molmil
Influenza B M2 Proton Channel in the Closed State - SSNMR Structure at pH 7.5
Descriptor: BM2 protein
Authors:Mandala, V.S, Loftis, A.R, Shcherbakov, A.S, Pentelute, B.L, Hong, M.
Deposit date:2019-07-21
Release date:2020-02-05
Last modified:2024-05-01
Method:SOLID-STATE NMR
Cite:Atomic structures of closed and open influenza B M2 proton channel reveal the conduction mechanism.
Nat.Struct.Mol.Biol., 27, 2020
1RZF
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BU of 1rzf by Molmil
Crystal structure of Human anti-HIV-1 GP120-reactive antibody E51
Descriptor: Fab E51 heavy chain, Fab E51 light chain, GLYCEROL, ...
Authors:Huang, C.C, Venturi, M, Majeed, S, Moore, M.J, Phogat, S, Zhang, M.-Y, Dimitrov, D.S, Hendrickson, W.A, Robinson, J, Sodroski, J, Wyatt, R, Choe, H, Farzan, M, Kwong, P.D.
Deposit date:2003-12-24
Release date:2004-02-03
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural basis of tyrosine sulfation and VH-gene usage in antibodies that recognize the HIV type 1 coreceptor-binding site on gp120
Proc.Natl.Acad.Sci.USA, 101, 2004
6WIV
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BU of 6wiv by Molmil
Structure of human GABA(B) receptor in an inactive state
Descriptor: (2R)-3-{[(S)-(2-aminoethoxy)(hydroxy)phosphoryl]oxy}-2-{[(9Z)-octadec-9-enoyl]oxy}propyl (5Z,8Z,11Z,14Z)-icosa-5,8,11,14-tetraenoate, 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
Authors:Park, J, Fu, Z, Frangaj, A, Liu, J, Mosyak, L, Shen, T, Slavkovich, V.N, Ray, K.M, Taura, J, Cao, B, Geng, Y, Zuo, H, Kou, Y, Grassucci, R, Chen, S, Liu, Z, Lin, X, Williams, J.P, Rice, W.J, Eng, E.T, Huang, R.K, Soni, R.K, Kloss, B, Yu, Z, Javitch, J.A, Hendrickson, W.A, Slesinger, P.A, Quick, M, Graziano, J, Yu, H, Fiehn, O, Clarke, O.B, Frank, J, Fan, Q.R.
Deposit date:2020-04-10
Release date:2020-07-01
Last modified:2020-08-26
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Structure of human GABABreceptor in an inactive state.
Nature, 584, 2020
1LJP
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BU of 1ljp by Molmil
Crystal Structure of beta-Cinnamomin Elicitin
Descriptor: Beta-elicitin cinnamomin
Authors:Rodrigues, M.L, Archer, M, Martel, P, Jacquet, A, Cravador, A, Carrondo, M.A.
Deposit date:2002-04-22
Release date:2002-07-31
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structure of beta-cinnamomin, a protein toxic to some plant species.
Acta Crystallogr.,Sect.D, 58, 2002
6GG2
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BU of 6gg2 by Molmil
The structure of FsqB from Aspergillus fumigatus, a flavoenzyme of the amine oxidase family
Descriptor: Amino acid oxidase fmpA, FLAVIN-ADENINE DINUCLEOTIDE
Authors:Pavkov-Keller, T, Lahham, M, Macheroux, P, Gruber, K.
Deposit date:2018-05-02
Release date:2018-09-19
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.598 Å)
Cite:Oxidative cyclization ofN-methyl-dopa by a fungal flavoenzyme of the amine oxidase family.
J. Biol. Chem., 293, 2018
2OYI
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BU of 2oyi by Molmil
Crystal Structure of Fragment D of gammaD298,301A Fibrinogen with the Peptide Ligand Gly-Pro-Arg-Pro-Amide
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, Fibrinogen alpha chain, ...
Authors:Kostelansky, M.S, Gorkun, O.V, Lord, S.T.
Deposit date:2007-02-22
Release date:2007-05-15
Last modified:2021-10-20
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Probing the gamma2 Calcium-Binding Site: Studies with gammaD298,301A Fibrinogen Reveal Changes in the gamma294-301 Loop that Alter the Integrity of the "a" Polymerization Site.
Biochemistry, 46, 2007
4L58
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BU of 4l58 by Molmil
Crystal structure of the MLL5 PHD finger in complex with H3K4me3
Descriptor: Histone H3 peptide, Histone-lysine N-methyltransferase MLL5, ZINC ION
Authors:Tong, Q, Ali, M, Kutateladze, T.G.
Deposit date:2013-06-10
Release date:2013-06-26
Last modified:2013-07-24
Method:X-RAY DIFFRACTION (1.48 Å)
Cite:Molecular basis for chromatin binding and regulation of MLL5.
Proc.Natl.Acad.Sci.USA, 110, 2013

224572

數據於2024-09-04公開中

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