Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 51630 results

8WGO
DownloadVisualize
BU of 8wgo by Molmil
Cryo-EM structure of ClassIII Lanthipeptide modification enzyme PneKC in the presence of PneA and GTPrS.
Descriptor: 5'-GUANOSINE-DIPHOSPHATE-MONOTHIOPHOSPHATE, MAGNESIUM ION, PHOSPHATE ION, ...
Authors:Li, Y, Luo, M, Shao, K, Li, J.
Deposit date:2023-09-22
Release date:2024-08-28
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Mechanistic insights into lanthipeptide modification by a distinct subclass of LanKC enzyme that forms dimers.
Nat Commun, 15, 2024
6AJX
DownloadVisualize
BU of 6ajx by Molmil
Crystal structure of BRD4 in complex with isoliquiritigenin in the absence of DMSO
Descriptor: 2',4,4'-TRIHYDROXYCHALCONE, Bromodomain-containing protein 4, SODIUM ION
Authors:Yokoyama, T, Matsumoto, K, Nabeshima, Y, Mizuguchi, M.
Deposit date:2018-08-28
Release date:2019-06-12
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.887 Å)
Cite:Structural and thermodynamic characterization of the binding of isoliquiritigenin to the first bromodomain of BRD4.
Febs J., 286, 2019
9EVR
DownloadVisualize
BU of 9evr by Molmil
Crystal structure of the kinetoplastid kinetochore protein KKT23 N-terminal domain from Trypanosoma brucei
Descriptor: N-acetyltransferase domain-containing protein
Authors:Ludzia, P, Ishii, M, Akiyoshi, B.
Deposit date:2024-04-01
Release date:2024-08-28
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:The kinetoplastid kinetochore protein KKT23 acetyltransferase is a structural homolog of GCN5 that acetylates the histone H2A C-terminal tail
Biorxiv, 2024
9EVQ
DownloadVisualize
BU of 9evq by Molmil
Crystal structure of the kinetoplastid kinetochore protein KKT23 acetyltransferase domain from Trypanosoma brucei
Descriptor: ACETYL COENZYME *A, N-acetyltransferase domain-containing protein
Authors:Ludzia, P, Ishii, M, Akiyoshi, B.
Deposit date:2024-04-01
Release date:2024-08-28
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:The kinetoplastid kinetochore protein KKT23 acetyltransferase is a structural homolog of GCN5 that acetylates the histone H2A C-terminal tail
Biorxiv, 2024
9F5Q
DownloadVisualize
BU of 9f5q by Molmil
Crystal structure of selenomethionine-labelled kinetoplastid kinetochore protein KKT23 acetyltransferase domain from Trypanosoma brucei
Descriptor: ACETYL COENZYME *A, N-acetyltransferase domain-containing protein
Authors:Ludzia, P, Ishii, M, Akiyoshi, B.
Deposit date:2024-04-30
Release date:2024-08-28
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:The kinetoplastid kinetochore protein KKT23 acetyltransferase is a structural homolog of GCN5 that acetylates the histone H2A C-terminal tail
Biorxiv, 2024
6AB2
DownloadVisualize
BU of 6ab2 by Molmil
Crystal structure of Methanosarcina mazei PylRS(Y306A/Y384F) complexed with oClZLys
Descriptor: (2S)-2-azanyl-6-[(2-chlorophenyl)methoxycarbonylamino]hexanoic acid, 1,2-ETHANEDIOL, ADENOSINE-5'-TRIPHOSPHATE, ...
Authors:Yanagisawa, T, Kuratani, M, Yokoyama, S.
Deposit date:2018-07-19
Release date:2019-04-17
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Structural Basis for Genetic-Code Expansion with Bulky Lysine Derivatives by an Engineered Pyrrolysyl-tRNA Synthetase.
Cell Chem Biol, 26, 2019
6AJY
DownloadVisualize
BU of 6ajy by Molmil
Crystal structure of BRD4 in complex with 2',4'-dihydroxy-2-methoxychalcone
Descriptor: 2',4'-dihydroxy-2-methoxychalcone, Bromodomain-containing protein 4, SODIUM ION
Authors:Yokoyama, T, Matsumoto, K, Nabeshima, Y, Mizuguchi, M.
Deposit date:2018-08-28
Release date:2019-06-12
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structural and thermodynamic characterization of the binding of isoliquiritigenin to the first bromodomain of BRD4.
Febs J., 286, 2019
6AL6
DownloadVisualize
BU of 6al6 by Molmil
Crystal structure HpiC1 in P42 space group
Descriptor: 12-epi-hapalindole C/U synthase, CALCIUM ION
Authors:Newmister, S.A, Li, S, Garcia-Borras, M, Sanders, J.N, Yang, S, Lowell, A.N, Yu, F, Smith, J.L, Williams, R.M, Houk, K.N, Sherman, D.H.
Deposit date:2017-08-07
Release date:2018-03-07
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.088 Å)
Cite:Structural basis of the Cope rearrangement and cyclization in hapalindole biogenesis.
Nat. Chem. Biol., 14, 2018
6AJ8
DownloadVisualize
BU of 6aj8 by Molmil
Crystal structure of Trypanosoma brucei glycosomal isocitrate dehydrogenase in complex with NADP+, alpha-ketoglutarate and ca2+
Descriptor: 2-OXOGLUTARIC ACID, CALCIUM ION, Isocitrate dehydrogenase [NADP], ...
Authors:Wang, X, Inaoka, D.K, Shiba, T, Balogun, E.O, Ziebart, N, Allman, S, Watanabe, Y, Nozaki, T, Boshart, M, Bringaud, F, Harada, S, Kita, K.
Deposit date:2018-08-27
Release date:2019-08-28
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Biochemical characterization of a novel Trypanosoma brucei glycosomal isocitrate dehydrogenase with dual coenzyme specificity (NADP+/NAD+)
To Be Published
6AM3
DownloadVisualize
BU of 6am3 by Molmil
Regulator of G protein signaling (RGS) 17 in complex with Ca2+
Descriptor: CALCIUM ION, Regulator of G-protein signaling 17, TETRAETHYLENE GLYCOL, ...
Authors:Sieng, M, Lyon, A.M.
Deposit date:2017-08-09
Release date:2019-02-13
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.53 Å)
Cite:High-resolution structure of RGS17 suggests a role for Ca2+in promoting the GTPase-activating protein activity by RZ subfamily members.
J.Biol.Chem., 294, 2019
6AJZ
DownloadVisualize
BU of 6ajz by Molmil
Joint nentron and X-ray structure of BRD4 in complex with colchicin
Descriptor: Bromodomain-containing protein 4, N-[(7S)-1,2,3,10-tetramethoxy-9-oxo-6,7-dihydro-5H-benzo[d]heptalen-7-yl]ethanamide, SODIUM ION
Authors:Yokoyama, T, Ostermann, A, Schrader, T.E, Nabeshima, Y, Mizuguchi, M.
Deposit date:2018-08-28
Release date:2019-06-12
Last modified:2024-03-27
Method:NEUTRON DIFFRACTION (1.301 Å), X-RAY DIFFRACTION
Cite:Structural and thermodynamic characterization of the binding of isoliquiritigenin to the first bromodomain of BRD4.
Febs J., 286, 2019
6ACR
DownloadVisualize
BU of 6acr by Molmil
Crystal structure of human ALK2 kinase domain with R206H mutation in complex with RK-59638
Descriptor: Activin receptor type-1, N-(4-methoxyphenyl)-4-[3-(pyridin-3-yl)-1H-pyrazol-4-yl]pyrimidin-2-amine, SULFATE ION
Authors:Sakai, N, Mishima-Tsumagari, C, Matsumoto, T, Shirouzu, M.
Deposit date:2018-07-27
Release date:2019-03-20
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:Bis-Heteroaryl Pyrazoles: Identification of Orally Bioavailable Inhibitors of Activin Receptor-Like Kinase-2 (R206H).
Chem. Pharm. Bull., 67, 2019
6AEB
DownloadVisualize
BU of 6aeb by Molmil
Crystal structure of xCas9 in complex with sgRNA and target DNA (AAG PAM)
Descriptor: DNA (25-MER), DNA (5'-D(*AP*AP*AP*AP*AP*GP*TP*AP*TP*TP*G)-3'), DNA Nuclease, ...
Authors:Guo, M, Ren, K, Zhu, Y, Huang, Z.
Deposit date:2018-08-04
Release date:2019-03-27
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.004 Å)
Cite:Structural insights into a high fidelity variant of SpCas9.
Cell Res., 29, 2019
6AID
DownloadVisualize
BU of 6aid by Molmil
Structural insights into the unique polylactate degrading mechanism of Thermobifida alba cutinase
Descriptor: CALCIUM ION, Esterase, LACTIC ACID, ...
Authors:Kitadokoro, K, Kakara, M, Matsui, S, Osokoshi, R, Thumarat, U, Kawai, F, Kamitani, S.
Deposit date:2018-08-22
Release date:2019-02-27
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Structural insights into the unique polylactate-degrading mechanism of Thermobifida alba cutinase.
Febs J., 286, 2019
6AL8
DownloadVisualize
BU of 6al8 by Molmil
Crystal structure HpiC1 Y101F/F138S
Descriptor: 1,2-ETHANEDIOL, 12-epi-hapalindole C/U synthase, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ...
Authors:Newmister, S.A, Li, S, Garcia-Borras, M, Sanders, J.N, Yang, S, Lowell, A.N, Yu, F, Smith, J.L, Williams, R.M, Houk, K.N, Sherman, D.H.
Deposit date:2017-08-07
Release date:2018-03-07
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.641 Å)
Cite:Structural basis of the Cope rearrangement and cyclization in hapalindole biogenesis.
Nat. Chem. Biol., 14, 2018
6AJW
DownloadVisualize
BU of 6ajw by Molmil
Crystal structure of BRD4 in complex with DMSO (Cocktail No. 4)
Descriptor: Bromodomain-containing protein 4, DIMETHYL SULFOXIDE, SODIUM ION
Authors:Yokoyama, T, Matsumoto, K, Nabeshima, Y, Mizuguchi, M.
Deposit date:2018-08-28
Release date:2019-06-12
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.401 Å)
Cite:Structural and thermodynamic characterization of the binding of isoliquiritigenin to the first bromodomain of BRD4.
Febs J., 286, 2019
6AKM
DownloadVisualize
BU of 6akm by Molmil
Crystal structure of SLMAP-SIKE1 complex
Descriptor: GLYCEROL, Sarcolemmal membrane-associated protein, Suppressor of IKBKE 1
Authors:Ma, J, Chen, M, Zhou, Z.C.
Deposit date:2018-09-02
Release date:2019-01-16
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Architecture, substructures, and dynamic assembly of STRIPAK complexes in Hippo signaling.
Cell Discov, 5, 2019
6ALK
DownloadVisualize
BU of 6alk by Molmil
NMR solution structure of the major beech pollen allergen Fag s 1
Descriptor: Fag s 1 pollen allergen
Authors:Moraes, A.H, Asam, A, Almeida, F.C.L, Wallner, M, Ferreira, F, Valente, A.P.
Deposit date:2017-08-08
Release date:2018-08-08
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural basis for cross-reactivity and conformation fluctuation of the major beech pollen allergen Fag s 1.
Sci Rep, 8, 2018
6AWW
DownloadVisualize
BU of 6aww by Molmil
Structure of PR 10 Allergen Ara h 8.01 in complex with 3-Hydroxy-2-naphthoic acid
Descriptor: 3-hydroxynaphthalene-2-carboxylic acid, Ara h 8 allergen, SODIUM ION
Authors:Offermann, L.R, Yarbrough, J, McBride, J, Hurlburt, B.K, Maleki, S.J, Pote, S.S, Chruszcz, M.
Deposit date:2017-09-06
Release date:2018-09-12
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure of PR-10 Allergen Ara h 8.01.
To Be Published
10GS
DownloadVisualize
BU of 10gs by Molmil
HUMAN GLUTATHIONE S-TRANSFERASE P1-1, COMPLEX WITH TER117
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, GLUTATHIONE S-TRANSFERASE P1-1, L-gamma-glutamyl-S-benzyl-N-[(S)-carboxy(phenyl)methyl]-L-cysteinamide
Authors:Oakley, A, Parker, M.
Deposit date:1997-08-14
Release date:1998-09-16
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The structures of human glutathione transferase P1-1 in complex with glutathione and various inhibitors at high resolution.
J.Mol.Biol., 274, 1997
11GS
DownloadVisualize
BU of 11gs by Molmil
Glutathione s-transferase complexed with ethacrynic acid-glutathione conjugate (form ii)
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, ETHACRYNIC ACID, GLUTATHIONE, ...
Authors:Oakley, A.J, Lo Bello, M, Mazzetti, A.P, Federici, G, Parker, M.W.
Deposit date:1997-11-03
Release date:1999-01-13
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:The glutathione conjugate of ethacrynic acid can bind to human pi class glutathione transferase P1-1 in two different modes.
FEBS Lett., 419, 1997
16GS
DownloadVisualize
BU of 16gs by Molmil
GLUTATHIONE S-TRANSFERASE P1-1 APO FORM 3
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, GLUTATHIONE S-TRANSFERASE, SULFATE ION
Authors:Oakley, A.J, Lo Bello, M, Ricci, G, Federici, G, Parker, M.W.
Deposit date:1997-11-30
Release date:1999-01-13
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Evidence for an induced-fit mechanism operating in pi class glutathione transferases.
Biochemistry, 37, 1998
6AVY
DownloadVisualize
BU of 6avy by Molmil
Crystal structure of Zea mays acyl-protein thioesterase 2
Descriptor: Acyl-protein thioesterase 2
Authors:Burger, M, Willige, B.C, Chory, J.
Deposit date:2017-09-04
Release date:2017-12-27
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.24 Å)
Cite:A hydrophobic anchor mechanism defines a deacetylase family that suppresses host response against YopJ effectors.
Nat Commun, 8, 2017
16PK
DownloadVisualize
BU of 16pk by Molmil
PHOSPHOGLYCERATE KINASE FROM TRYPANOSOMA BRUCEI BISUBSTRATE ANALOG
Descriptor: 1,1,5,5-TETRAFLUOROPHOSPHOPENTYLPHOSPHONIC ACID ADENYLATE ESTER, 3-PHOSPHOGLYCERATE KINASE, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID
Authors:Bernstein, B.E, Bressi, J, Blackburn, M, Gelb, M, Hol, W.G.J.
Deposit date:1998-05-18
Release date:1998-11-25
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:A bisubstrate analog induces unexpected conformational changes in phosphoglycerate kinase from Trypanosoma brucei.
J.Mol.Biol., 279, 1998
6AVV
DownloadVisualize
BU of 6avv by Molmil
Crystal structure of Arabidopsis thaliana SOBER1
Descriptor: Carboxylesterase SOBER1
Authors:Burger, M, Willige, B.C, Chory, J.
Deposit date:2017-09-04
Release date:2017-12-27
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.51003063 Å)
Cite:A hydrophobic anchor mechanism defines a deacetylase family that suppresses host response against YopJ effectors.
Nat Commun, 8, 2017

224201

数据于2024-08-28公开中

PDB statisticsPDBj update infoContact PDBjnumon