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9EVQ

Crystal structure of the kinetoplastid kinetochore protein KKT23 acetyltransferase domain from Trypanosoma brucei

Summary for 9EVQ
Entry DOI10.2210/pdb9evq/pdb
DescriptorN-acetyltransferase domain-containing protein, ACETYL COENZYME *A (3 entities in total)
Functional Keywordskinetochore, kinetoplastid, histone, acetyltransferase, mitosis, cell cycle
Biological sourceTrypanosoma brucei brucei TREU927
Total number of polymer chains2
Total formula weight53861.26
Authors
Ludzia, P.,Ishii, M.,Akiyoshi, B. (deposition date: 2024-04-01, release date: 2024-08-28, Last modification date: 2025-01-15)
Primary citationLudzia, P.,Ishii, M.,Deak, G.,Spanos, C.,Wilson, M.D.,Redfield, C.,Akiyoshi, B.
The kinetoplastid kinetochore protein KKT23 acetyltransferase is a structural homolog of GCN5 that acetylates the histone H2A C-terminal tail.
Structure, 33:123-, 2025
Cited by
PubMed Abstract: The kinetochore is the macromolecular protein machine that drives chromosome segregation in eukaryotes. In an evolutionarily divergent group of organisms called kinetoplastids, kinetochores are built using a unique set of proteins (KKT1-25 and KKIP1-12). KKT23 is a constitutively localized kinetochore protein containing a C-terminal acetyltransferase domain of unknown function. Here, using X-ray crystallography and nuclear magnetic resonance (NMR) spectroscopy, we have determined the structure and dynamics of the KKT23 acetyltransferase domain from Trypanosoma brucei and found that it is structurally similar to the GCN5 histone acetyltransferase domain. We find that KKT23 can acetylate the C-terminal tail of histone H2A and that knockdown of KKT23 results in decreased H2A acetylation levels in T. brucei. Finally, we have determined the crystal structure of the N-terminal region of KKT23 and shown that it interacts with KKT22. Our study provides important insights into the structure and function of the unique kinetochore acetyltransferase in trypanosomes.
PubMed: 39579771
DOI: 10.1016/j.str.2024.10.031
PDB entries with the same primary citation
Experimental method
X-RAY DIFFRACTION (1.75 Å)
Structure validation

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PDB entries from 2025-04-16

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