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PDB: 52230 results

3EC7
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BU of 3ec7 by Molmil
Crystal Structure of Putative Dehydrogenase from Salmonella typhimurium LT2
Descriptor: 1,2-ETHANEDIOL, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ACETIC ACID, ...
Authors:Kim, Y, Evdokimova, E, Kudritska, M, Savchenko, A, Edwards, A, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2008-08-29
Release date:2008-09-23
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Crystal Structure of Putative Dehydrogenase from Salmonella typhimurium LT2
To be Published
3EDP
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BU of 3edp by Molmil
The crystal structure of the protein lin2111 (functionally unknown) from Listeria innocua Clip11262
Descriptor: GLYCEROL, Lin2111 protein
Authors:Tan, K, Gu, M, Jaurequi, L, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2008-09-03
Release date:2008-09-16
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.092 Å)
Cite:The crystal structure of the protein lin2111 (functionally unknown) from Listeria innocua Clip11262
To be Published
3EEX
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BU of 3eex by Molmil
The crystal structure of OspA mutant
Descriptor: HEXAETHYLENE GLYCOL, Outer Surface Protein A
Authors:Makabe, K, Biancalana, M, Koide, S.
Deposit date:2008-09-06
Release date:2009-09-08
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.49 Å)
Cite:Minimalist design of water-soluble cross-{beta} architecture.
Proc.Natl.Acad.Sci.USA, 107, 2010
3ECZ
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BU of 3ecz by Molmil
Carbonmonoxy Sperm Whale Myoglobin at 120 K: Laser on [30 min]
Descriptor: CARBON MONOXIDE, Myoglobin, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Tomita, A, Sato, T, Ichiyanagi, K, Nozawa, S, Ichikawa, H, Chollet, M, Kawai, F, Park, S.-Y, Koshihara, S, Adachi, S.
Deposit date:2008-09-02
Release date:2009-02-24
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.21 Å)
Cite:Visualizing breathing motion of internal cavities in concert with ligand migration in myoglobin
Proc.Natl.Acad.Sci.USA, 106, 2009
1O7U
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BU of 1o7u by Molmil
Radiation induced tryparedoxin-I
Descriptor: TRYPAREDOXIN
Authors:Alphey, M.S, Bond, C.S, McSweeney, S.M, Hunter, W.N.
Deposit date:2002-11-14
Release date:2003-04-24
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Tryparedoxins from Crithidia Fasciculata and Trypanosoma Brucei: Photoreduction of the Redox Disulfide Using Synchrotron Radiation and Evidence for a Conformational Switch Implicated in Function
J.Biol.Chem., 278, 2003
3EDB
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BU of 3edb by Molmil
Carbonmonoxy Sperm Whale Myoglobin at 120 K: Laser on [150 min]
Descriptor: CARBON MONOXIDE, Myoglobin, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Tomita, A, Sato, T, Ichiyanagi, K, Nozawa, S, Ichikawa, H, Chollet, M, Kawai, F, Park, S.-Y, Koshihara, S, Adachi, S.
Deposit date:2008-09-03
Release date:2009-02-24
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.21 Å)
Cite:Visualizing breathing motion of internal cavities in concert with ligand migration in myoglobin
Proc.Natl.Acad.Sci.USA, 106, 2009
1O85
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BU of 1o85 by Molmil
Radiation-reduced Tryparedoxin-I
Descriptor: TRYPAREDOXIN
Authors:Alphey, M.S, Bond, C.S, Hunter, W.N.
Deposit date:2002-11-25
Release date:2003-04-24
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Tryparedoxins from Crithidia Fasciculata and Trypanosoma Brucei: Photoreduction of the Redox Disulfide Using Synchrotron Radiation and Evidence for a Conformational Switch Implicated in Function
J.Biol.Chem., 278, 2003
3EHR
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BU of 3ehr by Molmil
Crystal Structure of Human Osteoclast Stimulating Factor
Descriptor: Osteoclast-stimulating factor 1
Authors:Tong, S, Zhou, H, Gao, Y, Zhu, Z, Zhang, X, Teng, M, Niu, L.
Deposit date:2008-09-14
Release date:2009-08-04
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Crystal structure of human osteoclast stimulating factor
Proteins, 75, 2009
3EF3
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BU of 3ef3 by Molmil
cut-1a; NCN-Pt-Pincer-Cutinase Hybrid
Descriptor: (2,6-bis[(dimethylamino-kappaN)methyl]-4-{3-[(S)-ethoxy(4-nitrophenoxy)phosphoryl]propyl}phenyl-kappaC~1~)(chloro)platinum(2+), Cutinase-1
Authors:Rutten, L, Mannie, J.P.B.A, Lutz, M, Gros, P.
Deposit date:2008-09-08
Release date:2009-07-28
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Solid-state structural characterization of cutinase-ECE-pincer-metal hybrids
Chemistry, 15, 2009
3EIK
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BU of 3eik by Molmil
double stranded DNA binding protein
Descriptor: 1,2-ETHANEDIOL, TATA-box-binding protein
Authors:Cui, S, Wollmann, P, Moldt, M, Hopfner, K.-P.
Deposit date:2008-09-16
Release date:2009-09-22
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:structural studies of ecTBP
To be Published
3D2Q
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BU of 3d2q by Molmil
Crystal structure of MBNL1 tandem zinc finger 3 and 4 domain
Descriptor: Muscleblind-like protein 1, ZINC ION
Authors:Teplova, M, Patel, D.J.
Deposit date:2008-05-08
Release date:2008-12-02
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structural insights into RNA recognition by the alternative-splicing regulator muscleblind-like MBNL1.
Nat.Struct.Mol.Biol., 15, 2008
3D1G
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BU of 3d1g by Molmil
Structure of a small molecule inhibitor bound to a DNA sliding clamp
Descriptor: DNA polymerase III subunit beta, [(5R)-5-(2,3-dibromo-5-ethoxy-4-hydroxybenzyl)-4-oxo-2-thioxo-1,3-thiazolidin-3-yl]acetic acid
Authors:Georgescu, R.E, Yurieva, O, Seung-Sup, K, Kuriyan, J, Kong, X.-P, O'Donnell, M.
Deposit date:2008-05-05
Release date:2008-07-29
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.64 Å)
Cite:Structure of a small-molecule inhibitor of a DNA polymerase sliding clamp.
Proc.Natl.Acad.Sci.Usa, 105, 2008
1O8X
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BU of 1o8x by Molmil
Mutant tryparedoxin-I Cys43Ala
Descriptor: TRYPAREDOXIN
Authors:Alphey, M.S, Bond, C.S, Hunter, W.N.
Deposit date:2002-12-09
Release date:2003-04-24
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Tryparedoxins from Crithidia Fasciculata and Trypanosoma Brucei: Photoreduction of the Redox Disulfide Using Synchrotron Radiation and Evidence for a Conformational Switch Implicated in Function
J.Biol.Chem., 278, 2003
7FJH
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BU of 7fjh by Molmil
LecA from Pseudomonas aeruginosa in complex with 4-Phenylbutyryl hydroxamic acid (CAS: 32153-46-1)
Descriptor: CALCIUM ION, N-oxidanyl-4-phenyl-butanamide, PA-I galactophilic lectin
Authors:Shanina, S, Kuhaudomlarp, S, Siebs, E, Fuchsberger, F, Denis, M, da Silva Figueiredo Celstino Gomes, P, Clausen, M.H, Seeberger, P.H, Rognan, D, Titz, A, Imberty, A, Rademacher, C.
Deposit date:2021-08-04
Release date:2022-06-08
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.79 Å)
Cite:Targeting undruggable carbohydrate recognition sites through focused fragment library design.
Commun Chem, 5, 2022
3D6W
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BU of 3d6w by Molmil
LytTr DNA-binding domain of putative methyl-accepting/DNA response regulator from Bacillus cereus.
Descriptor: 1,2-ETHANEDIOL, FORMIC ACID, MAGNESIUM ION, ...
Authors:Osipiuk, J, Evdokimova, E, Kudritska, M, Savchenko, A, Edwards, A.M, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2008-05-20
Release date:2008-07-15
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:X-ray crystal structure of LytTr DNA-binding domain of putative methyl-accepting/DNA response regulator from Bacillus cereus.
To be Published
7F4B
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BU of 7f4b by Molmil
The crystal structure of the immature apo-enzyme of homoserine dehydrogenase from the hyperthermophilic archaeon Sulfurisphaera tokodaii.
Descriptor: MAGNESIUM ION, homoserine dehydrogenase
Authors:Kurihara, E, Kubota, T, Watanabe, K, Ogata, K, Kaneko, R, Oshima, T, Yoshimune, K, Goto, M.
Deposit date:2021-06-18
Release date:2022-06-22
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Conformational changes in the catalytic region are responsible for heat-induced activation of hyperthermophilic homoserine dehydrogenase.
Commun Biol, 5, 2022
3CEW
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BU of 3cew by Molmil
Crystal structure of a cupin protein (BF4112) from Bacteroides fragilis. Northeast Structural Genomics Consortium target BfR205
Descriptor: Uncharacterized cupin protein, ZINC ION
Authors:Forouhar, F, Chen, Y, Seetharaman, J, Mao, L, Xiao, R, Ciccosanti, C, Foote, E.L, Maglaqui, M, Wang, H, Baran, M.C, Acton, T.B, Montelione, G.T, Hunt, J.F, Tong, L, Northeast Structural Genomics Consortium (NESG)
Deposit date:2008-02-29
Release date:2008-03-25
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.31 Å)
Cite:Crystal structure of a cupin protein (BF4112) from Bacteroides fragilis. Northeast Structural Genomics Consortium target BfR205.
To be Published
7FFM
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BU of 7ffm by Molmil
Human serum transferrin with five osmium binding sites
Descriptor: MALONATE ION, NITRILOTRIACETIC ACID, OSMIUM ION, ...
Authors:Wang, M, Sun, H.
Deposit date:2021-07-23
Release date:2022-06-22
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3.06 Å)
Cite:Binding of ruthenium and osmium at non‐iron sites of transferrin accounts for their iron-independent cellular uptake.
J.Inorg.Biochem., 234, 2022
3CNW
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BU of 3cnw by Molmil
Three-dimensional structure of the protein XoxI (Q81AY6) from Bacillus cereus. Northeast Structural Genomics Consortium target BcR196.
Descriptor: Protein XoxI
Authors:Kuzin, A.P, Abashidze, M, Seetharaman, J, Wang, H, Ciccosanti, C, Mao, L, Xiao, R, Nair, R, Baran, M.C, Acton, T.B, Rost, B, Montelione, G.T, Hunt, J.F, Tong, L, Northeast Structural Genomics Consortium (NESG)
Deposit date:2008-03-26
Release date:2008-04-08
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.48 Å)
Cite:Three-dimensional structure of the protein XoxI (Q81AY6) from Bacillus cereus. Northeast Structural Genomics Consortium target BcR196.
To Be Published
3CRB
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BU of 3crb by Molmil
Crystal structure of the complex of C-lobe of lactoferrin with 2-chromenone at 2.6 A resolution
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CARBONATE ION, COUMARIN, ...
Authors:Vikram, G, Mir, R, Sinha, M, Singh, N, Kaur, P, Sharma, S, Singh, T.P.
Deposit date:2008-04-05
Release date:2008-04-29
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal structure of the complex of C-lobe of lactoferrin with 2-chromenone at 2.6 A resolution
To be Published
3CRH
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BU of 3crh by Molmil
Crystal structure of human fibroblast growth factor-1 with mutations Glu81Ser and Lys101Ala
Descriptor: Heparin-binding growth factor 1, SULFATE ION
Authors:Meher, A.K, Honjo, E, Kuroki, R, Lee, J, Somasundaram, T, Blaber, M.
Deposit date:2008-04-07
Release date:2009-02-17
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Engineering an improved crystal contact across a solvent-mediated interface of human fibroblast growth factor 1.
Acta Crystallogr.,Sect.F, 65, 2009
7F4C
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BU of 7f4c by Molmil
The crystal structure of the immature holo-enzyme of homoserine dehydrogenase complexed with NADP and 1,4-butandiol from the hyperthermophilic archaeon Sulfurisphaera tokodaii.
Descriptor: 1,4-BUTANEDIOL, Homoserine dehydrogenase, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Ogata, K, Kaneko, R, Kubota, T, Watanabe, K, Kurihara, E, Oshima, T, Yoshimune, K, Goto, M.
Deposit date:2021-06-18
Release date:2022-06-22
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Conformational changes in the catalytic region are responsible for heat-induced activation of hyperthermophilic homoserine dehydrogenase.
Commun Biol, 5, 2022
7F47
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BU of 7f47 by Molmil
Cryo-EM structure of Rhizobium etli MprF
Descriptor: (1R)-2-{[(S)-{[(2S)-2,3-dihydroxypropyl]oxy}(hydroxy)phosphoryl]oxy}-1-[(hexadecanoyloxy)methyl]ethyl (9Z)-octadec-9-enoate, Hypothetical conserved protein, [(2R)-1-[[(2R)-3-[(2S)-2,6-bis(azanyl)hexanoyl]oxy-2-oxidanyl-propoxy]-oxidanyl-phosphoryl]oxy-3-hexadecanoyloxy-propan-2-yl] (E)-octadec-9-enoate
Authors:Nishimura, M, Hirano, H, Kobayashi, K, Gill, C.P, Phan, C.N.K, Kise, Y, Kusakizako, T, Yamashita, K, Ito, Y, Roy, H, Nishizawa, T, Nureki, O.
Deposit date:2021-06-17
Release date:2022-06-22
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (2.99 Å)
Cite:Cryo-EM structure of Rhizobium etli MprF
To Be Published
7F4Z
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BU of 7f4z by Molmil
X-ray crystal structure of Y149A mutated Hsp72-NBD in complex with ADP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, CHLORIDE ION, Heat shock 70 kDa protein 1B, ...
Authors:Yokoyama, T, Fujii, S, Nabeshima, Y, Mizuguchi, M.
Deposit date:2021-06-21
Release date:2022-06-29
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Neutron crystallographic analysis of the nucleotide-binding domain of Hsp72 in complex with ADP.
Iucrj, 9, 2022
7FFU
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BU of 7ffu by Molmil
Osmium-bound human serum transferrin
Descriptor: FE (III) ION, MALONATE ION, OSMIUM ION, ...
Authors:Wang, M, Sun, H.
Deposit date:2021-07-23
Release date:2022-06-22
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.601 Å)
Cite:Binding of ruthenium and osmium at non‐iron sites of transferrin accounts for their iron-independent cellular uptake.
J.Inorg.Biochem., 234, 2022

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