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PDB: 51630 results

1A5S
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BU of 1a5s by Molmil
CRYSTAL STRUCTURE OF WILD-TYPE TRYPTOPHAN SYNTHASE COMPLEXED WITH 5-FLUOROINDOLE PROPANOL PHOSPHATE AND L-SER BOUND AS AMINO ACRYLATE TO THE BETA SITE
Descriptor: 5-FLUOROINDOLE PROPANOL PHOSPHATE, PYRIDOXAL-5'-PHOSPHATE, SERINE, ...
Authors:Schneider, T.R, Gerhardt, E, Lee, M, Liang, P.-H, Anderson, K.S, Schlichting, I.
Deposit date:1998-02-17
Release date:1999-03-30
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Loop closure and intersubunit communication in tryptophan synthase.
Biochemistry, 37, 1998
8Q7Z
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BU of 8q7z by Molmil
Structure of the G. gallus 80S non-rotated ribosome
Descriptor: 18S rRNA, 28S rRNA, 40S ribosomal protein S11, ...
Authors:Nurullina, L, Jenner, L, Yusupov, M.
Deposit date:2023-08-17
Release date:2024-08-28
Method:ELECTRON MICROSCOPY (2.5 Å)
Cite:Structural insights into inactive ribosome complexes derived from cold-treated chick embryo cells
To Be Published
8TVK
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BU of 8tvk by Molmil
KRAS 1-169 G12C Mutant at 100k
Descriptor: GUANOSINE-5'-DIPHOSPHATE, Isoform 2B of GTPase KRas, MAGNESIUM ION
Authors:Deck, S.L, Xu, M, Milano, S.K, Aplin, C.
Deposit date:2023-08-18
Release date:2024-08-28
Method:X-RAY DIFFRACTION (1.04 Å)
Cite:Temperature Gradient Structures of Oncogenic KRAS G12C Mutants
To Be Published
8TXK
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BU of 8txk by Molmil
KRAS 1-169 G12C Mutant at 240k
Descriptor: GUANOSINE-5'-DIPHOSPHATE, Isoform 2B of GTPase KRas, MAGNESIUM ION
Authors:Deck, S.L, Xu, M, Milano, S.K, Aplin, C.
Deposit date:2023-08-23
Release date:2024-08-28
Method:X-RAY DIFFRACTION (1.38 Å)
Cite:Temperature Gradient Structures of Oncogenic KRAS G12C Mutants
To Be Published
6AAZ
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BU of 6aaz by Molmil
Crystal structure of Methanosarcina mazei PylRS(Y306A/Y384F) complexed with pNO2ZLys
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, CITRIC ACID, MAGNESIUM ION, ...
Authors:Yanagisawa, T, Kuratani, M, Yokoyama, S.
Deposit date:2018-07-19
Release date:2019-04-17
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.842 Å)
Cite:Structural Basis for Genetic-Code Expansion with Bulky Lysine Derivatives by an Engineered Pyrrolysyl-tRNA Synthetase.
Cell Chem Biol, 26, 2019
9EQJ
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BU of 9eqj by Molmil
Crystal structure of pVHL:EloB:EloC in complex with MP-1-39
Descriptor: (2S,4R)-1-[(2R)-2-[(1-fluoranylcyclopropyl)carbonylamino]-3-methyl-3-[[cis-4-(morpholin-4-ylmethyl)cyclohexyl]methylsulfanyl]butanoyl]-N-[[4-(4-methyl-1,3-thiazol-5-yl)phenyl]methyl]-4-oxidanyl-pyrrolidine-2-carboxamide, Elongin-B, Elongin-C, ...
Authors:Kroupova, A, Pierri, M, Liu, X, Ciulli, A.
Deposit date:2024-03-21
Release date:2024-08-28
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Stereochemical inversion at a 1,4-cyclohexyl PROTAC linker fine-tunes conformation and binding affinity.
Bioorg.Med.Chem.Lett., 110, 2024
8ZMF
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BU of 8zmf by Molmil
Crystal structure of an inverse agonist antipsychotic drug derivative-bound 5-HT2C
Descriptor: 1-[(4-fluorophenyl)methyl]-1-[(8~{S})-5-methyl-5-azaspiro[2.5]octan-8-yl]-3-[[4-(2-methylpropoxy)phenyl]methyl]urea, 5-hydroxytryptamine receptor 2C,Soluble cytochrome b562
Authors:Oguma, T, Asada, H, Sekiguchi, Y, Imono, M, Iwata, S, Kusakabe, K.
Deposit date:2024-05-23
Release date:2024-08-28
Method:X-RAY DIFFRACTION (3.6 Å)
Cite:Dual 5-HT 2A and 5-HT 2C Receptor Inverse Agonist That Affords In Vivo Antipsychotic Efficacy with Minimal hERG Inhibition for the Treatment of Dementia-Related Psychosis.
J.Med.Chem., 2024
6AB6
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BU of 6ab6 by Molmil
Cryo-EM structure of T=3 Penaeus vannamei nodavirus
Descriptor: CALCIUM ION, Capsid protein
Authors:Chen, N.C, Miyazaki, N, Yoshimura, M, Guan, H.H, Lin, C.C, Iwasaki, K, Chen, C.J.
Deposit date:2018-07-20
Release date:2019-03-20
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:The atomic structures of shrimp nodaviruses reveal new dimeric spike structures and particle polymorphism.
Commun Biol, 2, 2019
6AKP
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BU of 6akp by Molmil
Crystal Structural of FOXC2 DNA binding domain bound to PC promoter
Descriptor: DNA (5'-D(AP*CP*AP*CP*AP*AP*AP*TP*AP*TP*TP*TP*GP*TP*GP*T)-3'), Forkhead box protein C2, MAGNESIUM ION
Authors:Chen, X, Wei, H, Li, J, Liang, X, Dai, S, Jiang, L, Guo, M, Chen, Y.
Deposit date:2018-09-03
Release date:2019-02-06
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.323 Å)
Cite:Structural basis for DNA recognition by FOXC2.
Nucleic Acids Res., 47, 2019
6AMC
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BU of 6amc by Molmil
Engineered tryptophan synthase b-subunit from Pyrococcus furiosus, PfTrpB4D11
Descriptor: SODIUM ION, Tryptophan synthase beta chain 1
Authors:Buller, A.R, Herger, M.
Deposit date:2017-08-09
Release date:2018-05-16
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:Directed Evolution Mimics Allosteric Activation by Stepwise Tuning of the Conformational Ensemble.
J. Am. Chem. Soc., 140, 2018
6A5O
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BU of 6a5o by Molmil
RNA polymerase II elongation complex stalled at SHL(-6) of the nucleosome
Descriptor: DNA (198-MER), DNA-directed RNA polymerase subunit, DNA-directed RNA polymerase subunit beta, ...
Authors:Kujirai, T, Ehara, H, Fujino, Y, Shirouzu, M, Sekine, S, Kurumizaka, H.
Deposit date:2018-06-25
Release date:2018-10-03
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (9.9 Å)
Cite:Structural basis of the nucleosome transition during RNA polymerase II passage.
Science, 362, 2018
8RFZ
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BU of 8rfz by Molmil
Structure of E166A BlaC from Mycobacterium tuberculosis at pH 4.5
Descriptor: Beta-lactamase, SULFATE ION
Authors:Sun, J, Bruenle, S, Ubbink, M.
Deposit date:2023-12-13
Release date:2024-08-28
Method:X-RAY DIFFRACTION (1.42 Å)
Cite:A low-barrier proton shared between two aspartates acts as a conformational switch that changes the substrate specificity of the beta-lactamase BlaC.
Int.J.Biol.Macromol., 278, 2024
8RG2
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BU of 8rg2 by Molmil
Structure of BlaC from Mycobacterium tuberculosis at pH 8
Descriptor: Beta-lactamase, GLYCEROL
Authors:Sun, J, Bruenle, S, Ubbink, M.
Deposit date:2023-12-13
Release date:2024-08-28
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:A low-barrier proton shared between two aspartates acts as a conformational switch that changes the substrate specificity of the beta-lactamase BlaC.
Int.J.Biol.Macromol., 278, 2024
8RII
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BU of 8rii by Molmil
Structure of E166A BlaC from Mycobacterium tuberculosis at pH 6.5
Descriptor: Beta-lactamase
Authors:Sun, J, Bruenle, S, Ubbink, M.
Deposit date:2023-12-18
Release date:2024-08-28
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:A low-barrier proton shared between two aspartates acts as a conformational switch that changes the substrate specificity of the beta-lactamase BlaC.
Int.J.Biol.Macromol., 278, 2024
6AB8
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BU of 6ab8 by Molmil
Crystal structure of Methanosarcina mazei PylRS(Y306A/Y384F) complexed with ZLys
Descriptor: (2S)-2-azanyl-6-(phenylmethoxycarbonylamino)hexanoic acid, ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
Authors:Yanagisawa, T, Kuratani, M, Yokoyama, S.
Deposit date:2018-07-20
Release date:2019-04-17
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.753 Å)
Cite:Structural Basis for Genetic-Code Expansion with Bulky Lysine Derivatives by an Engineered Pyrrolysyl-tRNA Synthetase.
Cell Chem Biol, 26, 2019
6AJV
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BU of 6ajv by Molmil
Crystal structure of BRD4 in complex with isoliquiritigenin and DMSO (Cocktail No. 3)
Descriptor: 2',4,4'-TRIHYDROXYCHALCONE, Bromodomain-containing protein 4, DIMETHYL SULFOXIDE, ...
Authors:Yokoyama, T, Matsumoto, K, Nabeshima, Y, Mizuguchi, M.
Deposit date:2018-08-28
Release date:2019-06-12
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Structural and thermodynamic characterization of the binding of isoliquiritigenin to the first bromodomain of BRD4.
Febs J., 286, 2019
6ACC
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BU of 6acc by Molmil
Trypsin-cleaved and low pH-treated SARS-CoV spike glycoprotein and ACE2 complex, ACE2-free conformation with three RBD in down conformation
Descriptor: Spike glycoprotein
Authors:Gui, M, Song, W.
Deposit date:2018-07-26
Release date:2018-08-08
Last modified:2019-11-06
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Cryo-EM structure of the SARS coronavirus spike glycoprotein in complex with its host cell receptor ACE2.
PLoS Pathog., 14, 2018
6AEG
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BU of 6aeg by Molmil
Crystal structure of xCas9 in complex with sgRNA and target DNA (GAT PAM)
Descriptor: DNA (25-MER), DNA (5'-D(*AP*AP*AP*GP*AP*TP*TP*AP*TP*TP*G)-3'), DNA nuclease, ...
Authors:Guo, M, Ren, K, Zhu, Y, Huang, Z.
Deposit date:2018-08-04
Release date:2019-03-27
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.701 Å)
Cite:Structural insights into a high fidelity variant of SpCas9.
Cell Res., 29, 2019
8TWX
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BU of 8twx by Molmil
Synthesis and Evaluation of Diaryl Ether Modulators of the Leukotriene A4 Hydrolase Aminopeptidase Activity
Descriptor: 5-[4-(4-chlorophenoxy)phenyl]-1H-pyrazol-3-amine, Leukotriene A-4 hydrolase, ZINC ION
Authors:Lee, K.H, Lee, S.H, Paige, M, Noble, S.M.
Deposit date:2023-08-21
Release date:2024-08-28
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Synthesis and Evaluation of Diaryl Ether Modulators of the Leukotriene A4 Hydrolase Aminopeptidase Activity
To be published
8TY2
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BU of 8ty2 by Molmil
KRAS 1-169 G12C Mutant at 293k
Descriptor: GUANOSINE-5'-DIPHOSPHATE, Isoform 2B of GTPase KRas, MAGNESIUM ION
Authors:Deck, S.L, Xu, M, Milano, S.K, Aplin, C.
Deposit date:2023-08-24
Release date:2024-08-28
Method:X-RAY DIFFRACTION (1.41 Å)
Cite:Temperature Gradient Structures of Oncogenic KRAS G12C Mutants
To Be Published
8TY8
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BU of 8ty8 by Molmil
KRAS 1-169 G12C Mutant at 310k
Descriptor: GUANOSINE-5'-DIPHOSPHATE, Isoform 2B of GTPase KRas, MAGNESIUM ION
Authors:Deck, S.L, Xu, M, Milano, S.K, Aplin, C.
Deposit date:2023-08-24
Release date:2024-08-28
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Temperature Gradient Structures of Oncogenic KRAS G12C Mutants
To Be Published
6ACD
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BU of 6acd by Molmil
Trypsin-cleaved and low pH-treated SARS-CoV spike glycoprotein and ACE2 complex, ACE2-free conformation with one RBD in up conformation
Descriptor: Spike glycoprotein
Authors:Gui, M, Song, W.
Deposit date:2018-07-26
Release date:2018-08-08
Last modified:2019-11-06
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Cryo-EM structure of the SARS coronavirus spike glycoprotein in complex with its host cell receptor ACE2.
PLoS Pathog., 14, 2018
8TY9
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BU of 8ty9 by Molmil
KRAS 1-169 G12C Mutant at 313k
Descriptor: GUANOSINE-5'-DIPHOSPHATE, Isoform 2B of GTPase KRas, MAGNESIUM ION
Authors:Deck, S.L, Xu, M, Milano, S.K, Aplin, C.
Deposit date:2023-08-24
Release date:2024-08-28
Method:X-RAY DIFFRACTION (1.43 Å)
Cite:Temperature Gradient Structures of Oncogenic KRAS G12C Mutants
To Be Published
8W7A
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BU of 8w7a by Molmil
Cryo-EM structure of ClassIII Lanthipeptide modification enzyme PneKC in the presence of GTP.
Descriptor: GUANOSINE-5'-TRIPHOSPHATE, Protein kinase domain-containing protein
Authors:Li, Y, Luo, M, Shao, K, Li, J.
Deposit date:2023-08-30
Release date:2024-08-28
Method:ELECTRON MICROSCOPY (3.77 Å)
Cite:Mechanistic insights into lanthipeptide modification by a distinct subclass of LanKC enzyme that forms dimers.
Nat Commun, 15, 2024
8W7J
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BU of 8w7j by Molmil
Cryo-EM structure of ClassIII Lanthipeptide modification enzyme PneKC with chain A bounded to substrate PneA and GTP.
Descriptor: GUANOSINE-5'-TRIPHOSPHATE, PHOSPHATE ION, PneA LP, ...
Authors:Li, Y, Luo, M, Shao, K, Li, J, Li, Z.
Deposit date:2023-08-30
Release date:2024-08-28
Method:ELECTRON MICROSCOPY (3.98 Å)
Cite:Mechanistic insights into lanthipeptide modification by a distinct subclass of LanKC enzyme that forms dimers.
Nat Commun, 15, 2024

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