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PDB: 51630 results

8Q3J
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BU of 8q3j by Molmil
Crystal structure of mIL-38 in complex with a neutralizing Fab e04 fragment
Descriptor: Fab e04 Heavy Chain (e04 HC), Fab e04 Light Chain (e04 LC), Interleukin-1 family member 10, ...
Authors:Garcia-Pardo, J, Da Silva, P, Mora, J, Wiechmann, S, Putyrski, M, You, X, Kannt, A, Ernst, A, Brune, B, Weigert, A.
Deposit date:2023-08-04
Release date:2024-08-14
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Neutralizing IL-38 activates gammaDelta T cell-dependent anti-tumor immunity and sensitizes for chemotherapy
To be published
6QTQ
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BU of 6qtq by Molmil
Crystal structure of an Arabidopsis WD40 domain in complex with photoreceptor
Descriptor: E3 ubiquitin-protein ligase COP1, GLYCEROL, SULFATE ION, ...
Authors:Hothorn, M, Lau, K.
Deposit date:2019-02-25
Release date:2019-07-10
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Plant photoreceptors and their signaling components compete for COP1 binding via VP peptide motifs.
Embo J., 38, 2019
8PHZ
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BU of 8phz by Molmil
Helical reconstruction of CHIKV nsP3 helical scaffolds
Descriptor: Non-structural protein 3, ZINC ION
Authors:Reguera, J, Hons, M, Zimberger, C, Ptchelkine, D, Jones, R, Desfosses, A.
Deposit date:2023-06-20
Release date:2024-08-14
Method:ELECTRON MICROSCOPY (2.35 Å)
Cite:The alphavirus nsP3 protein forms helical tubular scaffolds important for viral replication and particle assembly
To be published
6QTX
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BU of 6qtx by Molmil
Crystal structure of an Arabidopsis WD40 domain in complex with a flowering transcription factor homolog
Descriptor: E3 ubiquitin-protein ligase COP1, GLYCEROL, SULFATE ION, ...
Authors:Hothorn, M, Lau, K.
Deposit date:2019-02-25
Release date:2019-07-10
Last modified:2019-10-02
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Plant photoreceptors and their signaling components compete for COP1 binding via VP peptide motifs.
Embo J., 38, 2019
6QU1
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BU of 6qu1 by Molmil
Crystal structure of the KAP1 RBCC domain in complex with the SMARCAD1 CUE1 domain at 3.7 angstrom resolution.
Descriptor: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1, Transcription intermediary factor 1-beta,Transcription intermediary factor 1-beta, ZINC ION
Authors:Newman, J.A, Aitkenhead, H, Gavard, A, Lim, M, Williams, H.L, Svejstrup, J.Q, von Delft, F, Arrowsmith, C.H, Edwards, A, Bountra, C, Gileadi, O.
Deposit date:2019-02-26
Release date:2019-07-17
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (3.7 Å)
Cite:A Ubiquitin-Binding Domain that Binds a Structural Fold Distinct from that of Ubiquitin.
Structure, 2019
5ZDP
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BU of 5zdp by Molmil
Crystal structure of cyanide-insensitive alternative oxidase from Trypanosoma brucei with ferulenol
Descriptor: 4-oxidanyl-3-[(2~{E},6~{E})-3,7,11-trimethyldodeca-2,6,10-trienyl]chromen-2-one, Alternative oxidase, mitochondrial, ...
Authors:Shiba, T, Inaoka, D.K, Takahashi, G, Tsuge, C, Kido, Y, Young, L, Ueda, S, Balogun, E.O, Nara, T, Honma, T, Tanaka, A, Inoue, M, Saimoto, H, Harada, S, Moore, A.L, Kita, K.
Deposit date:2018-02-23
Release date:2019-02-27
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.71 Å)
Cite:Insights into the ubiquinol/dioxygen binding and proton relay pathways of the alternative oxidase.
Biochim Biophys Acta Bioenerg, 1860, 2019
8Q22
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BU of 8q22 by Molmil
Crystal structure of Vanadium-dependent haloperoxidase R425S mutant in complex with 1,3,5-trimethoxybenzene (A. marina)
Descriptor: 1,3,5-trimethoxybenzene, PHOSPHATE ION, SODIUM ION, ...
Authors:Zeides, P, Bellmannn-Sickert, K, Zhang, R, Seel, C.J, Most, V, Schroeder, C.T, Groll, M, Gulder, T.
Deposit date:2023-08-01
Release date:2024-08-14
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Unraveling the Molecular Basis of Substrate Specificity and Halogen Activation in Vanadium-Dependent Haloperoxidases
to be published
5ZE3
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BU of 5ze3 by Molmil
Crystal structure of human lysyl oxidase-like 2 (hLOXL2) in a precursor state
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, Lysyl oxidase homolog 2, ...
Authors:Zhang, X, Liu, M.
Deposit date:2018-02-25
Release date:2018-04-11
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of human lysyl oxidase-like 2 (hLOXL2) in a precursor state.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
8QJ4
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BU of 8qj4 by Molmil
Receptor Sd-Amt1 (ON-state)
Descriptor: AMMONIUM ION, Ammonium transporter, CHLORIDE ION
Authors:Andrade, S.L, Pflueger, T, Gschell, M.
Deposit date:2023-09-12
Release date:2024-06-12
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:How sensor Amt-like proteins integrate ammonium signals.
Sci Adv, 10, 2024
8QPF
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BU of 8qpf by Molmil
Ammonium Transporter Amt1 from Shewanella denitrificans
Descriptor: Ammonium transporter
Authors:Gschell, M, Zhang, L, Einsle, O, Andrade, S.
Deposit date:2023-10-01
Release date:2024-06-12
Method:ELECTRON MICROSCOPY (2.53 Å)
Cite:How sensor Amt-like proteins integrate ammonium signals.
Sci Adv, 10, 2024
1A7Y
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BU of 1a7y by Molmil
CRYSTAL STRUCTURE OF ACTINOMYCIN D
Descriptor: ACTINOMYCIN D, ETHYL ACETATE, METHANOL
Authors:Schafer, M, Sheldrick, G.M, Bahner, I, Lackner, H.
Deposit date:1998-03-19
Release date:1999-03-23
Last modified:2024-07-10
Method:X-RAY DIFFRACTION (0.94 Å)
Cite:Crystal Structures of Actinomycin D and Actinomycin Z3.
Angew.Chem.Int.Ed.Engl., 37, 1998
1A6A
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BU of 1a6a by Molmil
THE STRUCTURE OF AN INTERMEDIATE IN CLASS II MHC MATURATION: CLIP BOUND TO HLA-DR3
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, HLA class II histocompatibility antigen, DR alpha chain, ...
Authors:Ghosh, P, Amaya, M, Mellins, E, Wiley, D.C.
Deposit date:1998-02-22
Release date:1998-05-27
Last modified:2023-08-02
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:The structure of an intermediate in class II MHC maturation: CLIP bound to HLA-DR3.
Nature, 378, 1995
6QXT
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BU of 6qxt by Molmil
Cas1-Cas2-Csn2-DNA dimer complex from the Type II-A CRISPR-Cas system
Descriptor: CALCIUM ION, CRISPR-associated endonuclease Cas1, CRISPR-associated endoribonuclease Cas2, ...
Authors:Wilkinson, M, Drabavicius, G, Silanskas, A, Gasiunas, G, Siksnys, V, Wigley, D.B.
Deposit date:2019-03-08
Release date:2019-05-08
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (8.9 Å)
Cite:Structure of the DNA-Bound Spacer Capture Complex of a Type II CRISPR-Cas System.
Mol.Cell, 75, 2019
8QJ3
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BU of 8qj3 by Molmil
Receptor Sd-Amt1 (OFF-state)
Descriptor: Ammonium transporter, CHLORIDE ION, DODECYL-BETA-D-MALTOSIDE
Authors:Andrade, S.L, Pflueger, T, Gschell, M.
Deposit date:2023-09-12
Release date:2024-06-12
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:How sensor Amt-like proteins integrate ammonium signals.
Sci Adv, 10, 2024
8R0E
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BU of 8r0e by Molmil
p97 (VCP) mutant - F266A
Descriptor: Transitional endoplasmic reticulum ATPase
Authors:Arie, M, Matzov, D, Karmona, R, Szenkier, N, Stanhill, A, Navon, A.
Deposit date:2023-10-31
Release date:2024-05-29
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:p97 (VCP) mutant - F266A
To Be Published
1AA7
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BU of 1aa7 by Molmil
INFLUENZA VIRUS MATRIX PROTEIN CRYSTAL STRUCTURE AT PH 4.0
Descriptor: INFLUENZA VIRUS MATRIX PROTEIN
Authors:Sha, B, Luo, M.
Deposit date:1997-01-24
Release date:1998-01-28
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.08 Å)
Cite:Structure of a bifunctional membrane-RNA binding protein, influenza virus matrix protein M1.
Nat.Struct.Biol., 4, 1997
6QZ9
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BU of 6qz9 by Molmil
The cryo-EM structure of the collar complex and tail axis in bacteriophage phi29
Descriptor: Portal protein, Pre-neck appendage protein, Proximal tail tube connector protein
Authors:Xu, J, Wang, D, Gui, M, Xiang, Y.
Deposit date:2019-03-11
Release date:2019-06-12
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Structural assembly of the tailed bacteriophage φ29.
Nat Commun, 10, 2019
8TFV
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BU of 8tfv by Molmil
INSECT DEFENSE PEPTIDE
Descriptor: PROTEIN (THANATIN)
Authors:Mandard, N, Sodano, P, Labbe, H, Bonmatin, J.M, Bulet, P, Hetru, C, Ptak, M, Vovelle, F.
Deposit date:1998-11-24
Release date:1998-12-02
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Solution structure of thanatin, a potent bactericidal and fungicidal insect peptide, determined from proton two-dimensional nuclear magnetic resonance data.
Eur.J.Biochem., 256, 1998
6QUD
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BU of 6qud by Molmil
2-deoxy-galactose reaction intermediate of a Truncated beta-galactosidase III from Bifidobacterium bifidum
Descriptor: 2-deoxy-alpha-D-galactopyranose, Beta-galactosidase, CALCIUM ION
Authors:Thirup, S.S, Nielsen, J.A, Andersen, J.L, Alsarraf, H, Blaise, M.
Deposit date:2019-02-27
Release date:2020-03-18
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Truncated beta-galactosidase III from Bifidobacterium bifidum
To Be Published
6QN4
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BU of 6qn4 by Molmil
Death-associated Protein Kinase 1 (DAPK1) catalytic and auto-regulatory domains with S289E and S308E mutations
Descriptor: ACETATE ION, Death-associated protein kinase 1, GLYCEROL, ...
Authors:Huart, A.-S, Wilmanns, M.
Deposit date:2019-02-08
Release date:2019-08-28
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Molecular mechanisms behind DAPK regulation: how phosphorylation switches work
To Be Published
1ALU
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BU of 1alu by Molmil
HUMAN INTERLEUKIN-6
Descriptor: INTERLEUKIN-6, L(+)-TARTARIC ACID, SULFATE ION
Authors:Somers, W.S, Stahl, M, Seehra, J.S.
Deposit date:1997-06-03
Release date:1998-06-03
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:1.9 A crystal structure of interleukin 6: implications for a novel mode of receptor dimerization and signaling.
EMBO J., 16, 1997
5ZLG
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BU of 5zlg by Molmil
Human duodenal cytochrome b (Dcytb) in zinc ion and ascorbate bound form
Descriptor: ASCORBIC ACID, Cytochrome b reductase 1, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Ganasen, M, Togashi, H, Mauk, G.A, Shiro, Y, Sawai, H, Sugimoto, H.
Deposit date:2018-03-27
Release date:2018-10-31
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structural basis for promotion of duodenal iron absorption by enteric ferric reductase with ascorbate.
Commun Biol, 1, 2018
5ZLZ
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BU of 5zlz by Molmil
Structure of tPA and PAI-1
Descriptor: GLYCEROL, Plasminogen activator inhibitor 1, Tissue-type plasminogen activator
Authors:Min, L, Huang, M.
Deposit date:2018-03-31
Release date:2019-04-03
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.581 Å)
Cite:Development of a PAI-1 trapping agent (PAItrap2) based on inactivated tPA-SPD and the crystal structure of PAItrap2 in complex with PAI-1
To Be Published
1AB3
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BU of 1ab3 by Molmil
RIBOSOMAL PROTEIN S15 FROM THERMUS THERMOPHILUS, NMR, 26 STRUCTURES
Descriptor: RIBOSOMAL RNA BINDING PROTEIN S15
Authors:Berglund, H, Rak, A, Serganov, A, Garber, M, Hard, T.
Deposit date:1997-02-03
Release date:1997-04-01
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution structure of the ribosomal RNA binding protein S15 from Thermus thermophilus.
Nat.Struct.Biol., 4, 1997
14GS
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BU of 14gs by Molmil
GLUTATHIONE S-TRANSFERASE P1-1 APO FORM 1
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, GLUTATHIONE S-TRANSFERASE
Authors:Oakley, A.J, Lo Bello, M, Ricci, G, Federici, G, Parker, M.W.
Deposit date:1997-11-29
Release date:1999-01-13
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Evidence for an induced-fit mechanism operating in pi class glutathione transferases.
Biochemistry, 37, 1998

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