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PDB: 51630 results

4TT2
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BU of 4tt2 by Molmil
Crystal structure of ATAD2A bromodomain complexed with H4(1-20)K5Ac peptide
Descriptor: ATPase family AAA domain-containing protein 2, Histone H4K5Ac
Authors:Poncet-Montange, G, Zhan, Y, Bardenhagen, J, Petrocchi, A, Leo, E, Shi, X, Lee, G, Leonard, P, Geck Do, M, Cardozo, M, Palmer, W, Andersen, J, Jones, P, Ladbury, J.
Deposit date:2014-06-19
Release date:2014-12-24
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Observed bromodomain flexibility reveals histone peptide- and small molecule ligand-compatible forms of ATAD2.
Biochem.J., 466, 2015
3D7A
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BU of 3d7a by Molmil
Crystal structure of DUF54 family protein PH1010 from hyperthermophilic archaea Pyrococcus horikoshii OT3
Descriptor: UPF0201 protein PH1010
Authors:Shirokane, M, Miyazono, K.I, Sawano, Y, Tanokura, M.
Deposit date:2008-05-20
Release date:2008-12-09
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of the DUF54 family protein PH1010 from hyperthermophilic archaea Pyrococcus horikoshii OT3.
Proteins, 74, 2008
4RKN
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BU of 4rkn by Molmil
Wolinella succinogenes octaheme sulfite reductase MccA, form II
Descriptor: COPPER (II) ION, DITHIONITE, MccA, ...
Authors:Hermann, B, Kern, M, La Pietra, L, Simon, J, Einsle, O.
Deposit date:2014-10-13
Release date:2015-02-04
Last modified:2017-11-22
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:The octahaem MccA is a haem c-copper sulfite reductase.
Nature, 520, 2015
4TOF
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BU of 4tof by Molmil
1.65A resolution structure of BfrB (C89S, K96C) crystal form 1 from Pseudomonas aeruginosa
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, Bacterioferritin, POTASSIUM ION, ...
Authors:Lovell, S, Battaile, K.P, Yao, H, Kumar, R, Eshelman, K, Rivera, M.
Deposit date:2014-06-05
Release date:2015-02-11
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Concerted motions networking pores and distant ferroxidase centers enable bacterioferritin function and iron traffic.
Biochemistry, 54, 2015
4TQE
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BU of 4tqe by Molmil
Structure of tau peptide in complex with Tau5 antibody Fab fragment
Descriptor: Fab heavy chain, If kappa light chain, Microtubule-associated protein tau, ...
Authors:Cehlar, O, Skrabana, R, Novak, M.
Deposit date:2014-06-11
Release date:2015-07-29
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structure of tau peptide in complex with Tau5 antibody Fab fragment
To Be Published
7EY3
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BU of 7ey3 by Molmil
Double cysteine mutations in T1 lipase
Descriptor: CALCIUM ION, CHLORIDE ION, SODIUM ION, ...
Authors:Hamdan, S.H, Leow, T.C, Yahaya, N.M, Ali, M.S.M, Jonet, M.A, Mohamad Aris, S.N.A, Maiangwa, J.
Deposit date:2021-05-29
Release date:2022-12-14
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.04 Å)
Cite:Knotting terminal ends of mutant T1 lipase with disulfide bond improved structure rigidity and stability.
Appl.Microbiol.Biotechnol., 107, 2023
4RRP
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BU of 4rrp by Molmil
Crystal Structure of the Fab complexed with antigen Asf1p, Northeast Structural Genomics Consortium (NESG) Target PdR16
Descriptor: Antigen Asf1p, DI(HYDROXYETHYL)ETHER, Fab antibody, ...
Authors:Kuzin, A, Lew, S, Seetharaman, J, Mao, L, Xiao, R, Oconnell, P.T, Maglaqui, M, Bailey, L, Everett, J.K, Acton, T.B, Montelione, G.T, Hunt, J.F, Tong, L, Chaperone-Enabled Studies of Epigenetic Regulation Enzymes (CEBS), Northeast Structural Genomics Consortium (NESG)
Deposit date:2014-11-06
Release date:2014-12-31
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.79 Å)
Cite:Crystal Structure of the Fab complexed with antigen Asf1p, Northeast Structural Genomics Consortium (NESG) Target PdR16
To be Published
3D3Q
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BU of 3d3q by Molmil
Crystal structure of tRNA delta(2)-isopentenylpyrophosphate transferase (SE0981) from Staphylococcus epidermidis. Northeast Structural Genomics Consortium target SeR100
Descriptor: tRNA delta(2)-isopentenylpyrophosphate transferase
Authors:Forouhar, F, Abashidze, M, Seetharaman, J, Mao, L, Xiao, R, Maglaqui, M, Lee, D, Everett, J.K, Acton, T.B, Montelione, G.T, Tong, L, Hunt, J.F, Northeast Structural Genomics Consortium (NESG)
Deposit date:2008-05-12
Release date:2008-07-15
Last modified:2017-10-25
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal structure of tRNA delta(2)-isopentenylpyrophosphate transferase (SE0981) from Staphylococcus epidermidis.
To be Published
7KKF
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BU of 7kkf by Molmil
Crystal Structure of S. cerevisiae Ess1
Descriptor: Peptidyl-prolyl cis-trans isomerase ESS1
Authors:Namitz, K.E.W, Alicea-Velazquez, N.L, Cosgrove, M.S, Hanes, S.D.
Deposit date:2020-10-27
Release date:2021-03-31
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structure analysis suggests Ess1 isomerizes the carboxy-terminal domain of RNA polymerase II via a bivalent anchoring mechanism.
Commun Biol, 4, 2021
6YBS
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BU of 6ybs by Molmil
Structure of a human 48S translational initiation complex - head
Descriptor: 18S rRNA, 40S ribosomal protein S10, 40S ribosomal protein S12, ...
Authors:Brito Querido, J, Sokabe, M, Kraatz, S, Gordiyenko, Y, Skehel, M, Fraser, C, Ramakrishnan, V.
Deposit date:2020-03-17
Release date:2020-09-16
Last modified:2024-04-24
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Structure of a human 48Stranslational initiation complex.
Science, 369, 2020
4RZ0
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BU of 4rz0 by Molmil
Crystal Structure of Plasmodium falciparum putative histone methyltransferase PFL0690c
Descriptor: PFL0690c, UNKNOWN ATOM OR ION
Authors:Jiang, D.Q, Tempel, W, Loppnau, P, Graslund, S, He, H, Ravichandran, M, Seitova, A, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Hui, R, Hutchinson, A, Lin, Y.H, Structural Genomics Consortium (SGC)
Deposit date:2014-12-17
Release date:2015-01-21
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.487 Å)
Cite:Crystal Structure of Plasmodium falciparum putative histone methyltransferase PFL0690c
To be Published
4S1K
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BU of 4s1k by Molmil
Structure of Uranotaenia sapphirina cypovirus (CPV17) polyhedrin at 100 K
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, Polyhedrin
Authors:Ginn, H.M, Messerschmidt, M, Ji, X, Zhang, H, Axford, D, Gildea, R.J, Winter, G, Brewster, A.S, Hattne, J, Wagner, A, Grimes, J.M, Evans, G, Sauter, N.K, Sutton, G, Stuart, D.I.
Deposit date:2015-01-14
Release date:2015-03-25
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structure of CPV17 polyhedrin determined by the improved analysis of serial femtosecond crystallographic data.
Nat Commun, 6, 2015
4P6S
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BU of 4p6s by Molmil
Crystal Structure of tyrosinase from Bacillus megaterium with L-DOPA in the active site
Descriptor: 3,4-DIHYDROXYPHENYLALANINE, Tyrosinase, ZINC ION
Authors:Goldfeder, M, Kanteev, M, Adir, N, Fishman, A.
Deposit date:2014-03-25
Release date:2014-07-30
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Determination of tyrosinase substrate-binding modes reveals mechanistic differences between type-3 copper proteins.
Nat Commun, 5, 2014
4S3E
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BU of 4s3e by Molmil
IspG in complex with Inhibitor 7 (compound 1061)
Descriptor: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, GLYCEROL, IRON/SULFUR CLUSTER, ...
Authors:Quitterer, F, Frank, A, Wang, K, Rao, G, O'Dowd, B, Li, J, Guerra, F, Abdel-Azeim, S, Bacher, A, Eppinger, J, Oldfield, E, Groll, M.
Deposit date:2015-01-26
Release date:2015-04-29
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Atomic-Resolution Structures of Discrete Stages on the Reaction Coordinate of the [Fe4S4] Enzyme IspG (GcpE).
J.Mol.Biol., 427, 2015
4S1D
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BU of 4s1d by Molmil
Structure of IgG1 Fab fragment in complex with Biotincytidinamide
Descriptor: MAB M33 FAB FRAGMENT, heavy chain, light chain, ...
Authors:Dengl, S, Hoffmann, E, Grote, M, Wagner, C, Mundigl, O, Georges, G, Theorey, I, Stubenrauch, K.-G, Bujotzek, A, Josel, H.-P, Dziadek, S, Benz, J, Brinkmann, U.
Deposit date:2015-01-13
Release date:2015-03-04
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Hapten-directed spontaneous disulfide shuffling: a universal technology for site-directed covalent coupling of payloads to antibodies.
Faseb J., 29, 2015
3CZX
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BU of 3czx by Molmil
The crystal structure of the putative N-acetylmuramoyl-L-alanine amidase from Neisseria meningitidis
Descriptor: Putative N-acetylmuramoyl-L-alanine amidase, ZINC ION
Authors:Zhang, R, Zhou, M, Bargassa, M, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2008-04-30
Release date:2008-07-01
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:The crystal structure of the putative N-acetylmuramoyl-L-alanine amidase from Neisseria meningitidis.
To be Published
4TNF
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BU of 4tnf by Molmil
Crystal Structure of Human Transthyretin Lys15Trp Mutant
Descriptor: Transthyretin
Authors:Saelices, L, Cascio, D, Sawaya, M, Eisenberg, D.S.
Deposit date:2014-06-03
Release date:2015-12-30
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal Structure of Human Transthyretin Lys15Trp Mutant
to be published
4TOE
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BU of 4toe by Molmil
2.20A resolution structure of Iron Bound BfrB (D34F) from Pseudomonas aeruginosa
Descriptor: Bacterioferritin, FE (II) ION, POTASSIUM ION, ...
Authors:Lovell, S, Battaile, K.P, Yao, H, Kumar, R, Eshelman, K, Rivera, M.
Deposit date:2014-06-05
Release date:2015-02-11
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Concerted motions networking pores and distant ferroxidase centers enable bacterioferritin function and iron traffic.
Biochemistry, 54, 2015
7X1N
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BU of 7x1n by Molmil
Crystal structure of MEF2D-MRE complex
Descriptor: DNA (5'-D(P*AP*AP*CP*TP*AP*TP*TP*TP*AP*TP*AP*AP*G)-3'), DNA (5'-D(P*TP*CP*TP*TP*AP*TP*AP*AP*AP*TP*AP*GP*T)-3'), Myocyte enhancer factor 2D/deleted in azoospermia associated protein 1 fusion protein
Authors:Zhang, H, Zhang, M, Wang, Q.Q, Chen, Z, Chen, S.J, Meng, G.
Deposit date:2022-02-24
Release date:2022-05-25
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3.315 Å)
Cite:Functional, structural, and molecular characterizations of the leukemogenic driver MEF2D-HNRNPUL1 fusion.
Blood, 140, 2022
3D3N
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BU of 3d3n by Molmil
Crystal structure of lipase/esterase (lp_2923) from Lactobacillus plantarum. Northeast Structural Genomics Consortium target LpR108
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, CALCIUM ION, Putative lipase/esterase
Authors:Forouhar, F, Su, M, Seetharaman, J, Mao, L, Janjua, H, Xiao, R, Ciccosanti, C, Maglaqui, M, Foote, E.L, Zhao, L, Everett, J.K, Acton, T.B, Montelione, G.T, Tong, L, Hunt, J.F, Northeast Structural Genomics Consortium (NESG)
Deposit date:2008-05-12
Release date:2008-06-10
Last modified:2017-10-25
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of lipase/esterase (lp_2923) from Lactobacillus plantarum. Northeast Structural Genomics Consortium target LpR108
To be Published
4TU6
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BU of 4tu6 by Molmil
Crystal structure of apo ATAD2A bromodomain with N1064 alternate conformation
Descriptor: ATPase family AAA domain-containing protein 2, SULFATE ION
Authors:Poncet-Montange, G, Zhan, Y, Bardenhagen, J, Petrocchi, A, Leo, E, Shi, X, Lee, G, Leonard, P, Geck Do, M, Cardozo, M, Palmer, W, Andersen, J, Jones, P, Ladbury, J.
Deposit date:2014-06-23
Release date:2014-12-24
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.27 Å)
Cite:Observed bromodomain flexibility reveals histone peptide- and small molecule ligand-compatible forms of ATAD2.
Biochem.J., 466, 2015
4RLD
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BU of 4rld by Molmil
Crystal structure of kkf mutant of bla G 2 protein
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Aspartic protease Bla g 2, ZINC ION
Authors:Li, M, Gustchina, A, Pomes, A, Wlodawer, A.
Deposit date:2014-10-16
Release date:2015-10-21
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:to be determined
To be Published
4PI9
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BU of 4pi9 by Molmil
Crystal structure of S. Aureus Autolysin E in complex with muropeptide NAM-L-ALA-D-iGLU
Descriptor: (4R)-4-[[(2S)-2-[[(2R)-2-[(2R,3S,4R,5R,6R)-5-acetamido-2-(hydroxymethyl)-3,6-bis(oxidanyl)oxan-4-yl]oxypropanoyl]amino]propanoyl]amino]-5-azanyl-5-oxidanylidene-pentanoic acid, Autolysin E, CHLORIDE ION, ...
Authors:Mihelic, M, Renko, M, Turk, D.
Deposit date:2014-05-08
Release date:2015-10-14
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.48 Å)
Cite:The mechanism behind the selection of two different cleavage sites in NAG-NAM polymers.
IUCrJ, 4, 2017
4RQW
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BU of 4rqw by Molmil
Crystal structure of Myc3 N-terminal JAZ-binding domain [44-238] from Arabidopsis
Descriptor: CALCIUM ION, Transcription factor MYC3
Authors:Ke, J, Zhang, F, Zhou, X.E, Brunzelle, J, Zhou, M, Xu, H.E, Melcher, K, He, S.Y.
Deposit date:2014-11-05
Release date:2015-08-12
Last modified:2015-09-16
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural basis of JAZ repression of MYC transcription factors in jasmonate signalling.
Nature, 525, 2015
4RTI
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BU of 4rti by Molmil
The crystal structure of PsbP from Spinacia oleracea
Descriptor: CHLORIDE ION, MANGANESE (II) ION, Oxygen-evolving enhancer protein 2, ...
Authors:Cao, P, Xie, Y, Li, M, Pan, X.W, Zhang, H.M, Zhao, X.L, Su, X.D, Cheng, T, Chang, W.
Deposit date:2014-11-15
Release date:2015-03-11
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure analysis of extrinsic PsbP protein of photosystem II reveals a manganese-induced conformational change.
Mol Plant, 8, 2015

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