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PDB: 51964 results

2OES
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BU of 2oes by Molmil
MSrecA-native-SSB
Descriptor: PHOSPHATE ION, Protein recA
Authors:Krishna, R, Rajan Prabu, J, Manjunath, G.P, Datta, S, Chandra, N.R, Muniyappa, K, Vijayan, M.
Deposit date:2007-01-01
Release date:2007-06-19
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Snapshots of RecA protein involving movement of the C-domain and different conformations of the DNA-binding loops: crystallographic and comparative analysis of 11 structures of Mycobacterium smegmatis RecA
J.Mol.Biol., 367, 2007
6QO7
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BU of 6qo7 by Molmil
Crystal structure of ribonucleotide reductase NrdF from Bacillus anthracis aerobically soaked with ferrous ions (photo-reduced)
Descriptor: CHLORIDE ION, FE (II) ION, Ribonucleoside-diphosphate reductase subunit beta
Authors:Grave, K, Hogbom, M.
Deposit date:2019-02-12
Release date:2019-08-21
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (1.628 Å)
Cite:Redox-induced structural changes in the di-iron and di-manganese forms of Bacillus anthracis ribonucleotide reductase subunit NrdF suggest a mechanism for gating of radical access.
J.Biol.Inorg.Chem., 24, 2019
1KJ1
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BU of 1kj1 by Molmil
MANNOSE-SPECIFIC AGGLUTININ (LECTIN) FROM GARLIC (ALLIUM SATIVUM) BULBS COMPLEXED WITH ALPHA-D-MANNOSE
Descriptor: alpha-D-mannopyranose, lectin I, lectin II
Authors:Ramachandraiah, G, Chandra, N.R, Surolia, A, Vijayan, M.
Deposit date:2001-12-04
Release date:2002-02-22
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Re-refinement using reprocessed data to improve the quality of the structure: a case study involving garlic lectin.
Acta Crystallogr.,Sect.D, 58, 2002
7O0S
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BU of 7o0s by Molmil
Crystal structure of the N-terminal domain of CEP164(1-109) bound to camelid nanobody 36Z
Descriptor: Centrosomal protein of 164 kDa, Nanobody 36Z
Authors:e Silva, I.R, van Breugel, M.
Deposit date:2021-03-26
Release date:2021-09-15
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Molecular mechanisms underlying the role of the centriolar CEP164-TTBK2 complex in ciliopathies.
Structure, 30, 2022
1KRJ
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BU of 1krj by Molmil
Engineering Calcium-binding site into Cytochrome c Peroxidase (CcP)
Descriptor: Cytochrome c Peroxidase, POTASSIUM ION, PROTOPORPHYRIN IX CONTAINING FE
Authors:Bonagura, C.A, Bhaskar, B, Sundaramoorthy, M, Poulos, T.L.
Deposit date:2002-01-09
Release date:2002-01-23
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2 Å)
Cite:Conversion of an engineered potassium-binding site into a calcium-selective site in cytochrome c peroxidase.
J.Biol.Chem., 274, 1999
6C0Z
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BU of 6c0z by Molmil
Crystal structure of Efga from Methylobacterium extorquens in complex with formaldehyde
Descriptor: Efga, FORMIC ACID, oxydimethanol
Authors:Shamoo, Y, Davlieva, M.
Deposit date:2018-01-03
Release date:2019-01-16
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.83 Å)
Cite:Crystal structure of Efga form Methylobacterium extorquens in complex with formaldehyde
To Be Published
5V6P
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BU of 5v6p by Molmil
CryoEM structure of the ERAD-associated E3 ubiquitin-protein ligase HRD1
Descriptor: ERAD-associated E3 ubiquitin-protein ligase HRD1
Authors:Schoebel, S, Mi, W, Stein, A, Rapoport, T.A, Liao, M.
Deposit date:2017-03-17
Release date:2017-08-16
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (4.1 Å)
Cite:Cryo-EM structure of the protein-conducting ERAD channel Hrd1 in complex with Hrd3.
Nature, 548, 2017
3V5E
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BU of 3v5e by Molmil
Crystal structure of ClpP from Staphylococcus aureus in the active, extended conformation
Descriptor: ATP-dependent Clp protease proteolytic subunit
Authors:Gersch, M, List, A, Groll, M, Sieber, S.
Deposit date:2011-12-16
Release date:2012-02-08
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Insights into structural network responsible for oligomerization and activity of bacterial virulence regulator caseinolytic protease P (ClpP) protein.
J.Biol.Chem., 287, 2012
6BP0
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BU of 6bp0 by Molmil
Crystal Structure of the Human vaccinia-related kinase 1 bound to (R)-2-phenylaminopteridinone inhibitor
Descriptor: (7R)-2-[(3,5-difluoro-4-hydroxyphenyl)amino]-5,7,8-trimethyl-7,8-dihydropteridin-6(5H)-one, 1,2-ETHANEDIOL, CHLORIDE ION, ...
Authors:Counago, R.M, dos Reis, C.V, de Souza, G.P, Azevedo, A, Guimaraes, C, Mascarello, A, Gama, F, Ferreira, M, Massirer, K.B, Arruda, P, Edwards, A.M, Elkins, J, Structural Genomics Consortium (SGC)
Deposit date:2017-11-21
Release date:2017-12-06
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal Structure of the Human vaccinia-related kinase 1 bound to (R)-2-phenylaminopteridinone inhibitor
To Be Published
5O4Z
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BU of 5o4z by Molmil
Structure of the inactive T.maritima PDE (TM1595) D80N D154N mutant with substrate 5'-pApA
Descriptor: ADENOSINE-5'-MONOPHOSPHATE, CHLORIDE ION, DHH/DHHA1-type phosphodiesterase TM1595, ...
Authors:Witte, G, Drexler, D, Mueller, M.
Deposit date:2017-05-31
Release date:2017-10-25
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural and Biophysical Analysis of the Soluble DHH/DHHA1-Type Phosphodiesterase TM1595 from Thermotoga maritima.
Structure, 25, 2017
7O86
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BU of 7o86 by Molmil
1.73A X-ray crystal structure of the conserved C-terminal (CCT) of human SPAK
Descriptor: CALCIUM ION, MAGNESIUM ION, SODIUM ION, ...
Authors:Elvers, K.T, Bax, B.D, Lipka-Lloyd, M, Mehellou, Y.
Deposit date:2021-04-14
Release date:2021-09-22
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.73 Å)
Cite:Structures of the Human SPAK and OSR1 Conserved C-Terminal (CCT) Domains.
Chembiochem, 23, 2022
6CM2
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BU of 6cm2 by Molmil
SAMHD1 HD domain bound to decitabine triphosphate
Descriptor: 6-amino-3-{2-deoxy-5-O-[(R)-hydroxy{[(S)-hydroxy(phosphonooxy)phosphoryl]oxy}phosphoryl]-beta-D-erythro-pentofuranosyl}-3,4-dihydro-1,3,5-triazin-2(1H)-one, Deoxynucleoside triphosphate triphosphohydrolase SAMHD1, GUANOSINE-5'-TRIPHOSPHATE, ...
Authors:Oellerich, T, Schneider, C, Thomas, D, Knecht, K.M, Buzovetsky, O, Kaderali, L, Schliemann, C, Bohnenberger, H, Angenendt, L, Hartmann, W, Wardelmann, E, Rothenburger, T, Mohr, S, Scheich, S, Comoglio, F, Wilke, A, Strobel, P, Serve, H, Michaelis, M, Ferreiros, N, Geisslinger, G, Xiong, Y, Keppler, O.T, Cinatl, J.
Deposit date:2018-03-02
Release date:2019-06-19
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.14 Å)
Cite:Selective inactivation of hypomethylating agents by SAMHD1 provides a rationale for therapeutic stratification in AML.
Nat Commun, 10, 2019
2O5H
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BU of 2o5h by Molmil
Uncharacterized Protein Conserved in Bacteria, COG3792 from Neisseria meningitidis
Descriptor: Hypothetical protein
Authors:Kim, Y, Li, H, Gu, M, Bargassa, M, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2006-12-06
Release date:2007-01-09
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Uncharacterized Protein Conserved in Bacteria, COG3792 from Neisseria meningitidis
To be Published
5VBL
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BU of 5vbl by Molmil
Structure of apelin receptor in complex with agonist peptide
Descriptor: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, Apelin receptor,Rubredoxin,Apelin receptor Chimera, ZINC ION, ...
Authors:Ma, Y, Yue, Y, Ma, Y, Zhang, Q, Zhou, Q, Song, Y, Shen, Y, Li, X, Ma, X, Li, C, Hanson, M.A, Han, G.W, Sickmier, E.A, Swaminath, G, Zhao, S, Stevems, R.C, Hu, L.A, Zhong, W, Zhang, M, Xu, F.
Deposit date:2017-03-29
Release date:2017-05-31
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural Basis for Apelin Control of the Human Apelin Receptor
Structure, 25, 2017
6ORM
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BU of 6orm by Molmil
Crystal Structure of Peruvianin-I (Cysteine peptidase from Thevetia peruviana latex)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Peruvianin-I, beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Cruz, W.T, Bezerra, E.H.S, da Silva, F.M.S, Freire, V.N, Ramos, M.V, Rocha, B.A.M, Freitas, C.D.T.
Deposit date:2019-04-30
Release date:2020-05-06
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Crystal structure and specific location of a germin-like protein with proteolytic activity from Thevetia peruviana.
Plant Sci., 298, 2020
6CJC
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BU of 6cjc by Molmil
CRYSTAL STRUCTURE OF A FC FRAGMENT LALA MUTANT (L234A, L235A) OF HUMAN IGG1 (CRYSTAL FORM 3)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, Uncharacterized protein DKFZp686C11235
Authors:Tolbert, W.D, Van, V, Pazgier, M.
Deposit date:2018-02-26
Release date:2019-03-06
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.575 Å)
Cite:Antigen-Induced Allosteric Changes in a Human IgG1 Fc Increase Low-Affinity Fc gamma Receptor Binding.
Structure, 28, 2020
4KOY
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BU of 4koy by Molmil
Crystal structure of a GNAT superfamily acetyltransferase PA4794 in complex with Cephalosporin C
Descriptor: 1,2-ETHANEDIOL, 4-(3-ACETOXYMETHYL-2-CARBOXY-8-OXO-5-THIA-1-AZA-BICYCLO[4.2.0]OCT-2-EN-7-YLCARBAMOYL)-1-CARBOXY-BUTYL-AMMONIUM, SULFATE ION, ...
Authors:Majorek, K.A, Porebski, P.J, Chruszcz, M, Cymborowski, M, Joachimiak, A, Minor, W, Midwest Center for Structural Genomics (MCSG)
Deposit date:2013-05-12
Release date:2013-06-05
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Structural, Functional, and Inhibition Studies of a Gcn5-related N-Acetyltransferase (GNAT) Superfamily Protein PA4794: A NEW C-TERMINAL LYSINE PROTEIN ACETYLTRANSFERASE FROM PSEUDOMONAS AERUGINOSA.
J.Biol.Chem., 288, 2013
3V5I
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BU of 3v5i by Molmil
The crystal structure of the mutant ClpP S98A (Staphylococcus aureus)
Descriptor: ATP-dependent Clp protease proteolytic subunit
Authors:List, A, Gersch, M, Groll, M, Sieber, S.
Deposit date:2011-12-16
Release date:2012-02-08
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Insights into structural network responsible for oligomerization and activity of bacterial virulence regulator caseinolytic protease P (ClpP) protein.
J.Biol.Chem., 287, 2012
6ZCC
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BU of 6zcc by Molmil
X-ray structure of the Haloalkane dehalogenase HOB (HaloTag7-based Oligonucleotide Binder) labeled with a chloroalkane-tetramethylrhodamine fluorophore substrate
Descriptor: ACETATE ION, CALCIUM ION, Haloalkane dehalogenase, ...
Authors:Tarnawski, M, Johnsson, K, Hiblot, J.
Deposit date:2020-06-10
Release date:2021-04-21
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.52 Å)
Cite:Kinetic and Structural Characterization of the Self-Labeling Protein Tags HaloTag7, SNAP-tag, and CLIP-tag.
Biochemistry, 60, 2021
5UL0
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BU of 5ul0 by Molmil
S. CEREVISIAE CYP51 COMPLEXED WITH VT-1161
Descriptor: (R)-2-(2,4-Difluorophenyl)-1,1-difluoro-3-(1H-tetrazol-1-yl)-1-(5-(4-(2,2,2-trifluoroethoxy)phenyl)pyridin-2-yl)propan-2-ol, Lanosterol 14-alpha demethylase, PENTAETHYLENE GLYCOL, ...
Authors:Tyndall, J.D, Keniya, M.V, Sabherwal, M, Monk, B.C.
Deposit date:2017-01-23
Release date:2017-02-15
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Azole Resistance Reduces Susceptibility to the Tetrazole Antifungal VT-1161.
Antimicrob.Agents Chemother., 63, 2019
5ULY
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BU of 5uly by Molmil
Crystal Structure of Human Protocadherin-15 EC2-3
Descriptor: CALCIUM ION, Protocadherin-15
Authors:Wimalasena, L.N, Sotomayor, M.
Deposit date:2017-01-25
Release date:2018-08-08
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.64 Å)
Cite:Structural determinants of protocadherin-15 mechanics and function in hearing and balance perception.
Proc.Natl.Acad.Sci.USA, 2020
6OV9
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BU of 6ov9 by Molmil
Coiled-coil Trimer with Glu:p-nitrophenylalanine:Lys Triad
Descriptor: Coiled-coil Trimer with Glu:p-nitrophenylalanine:Lys Triad
Authors:Smith, M.S, Stern, K.L, Billings, W.M, Price, J.L.
Deposit date:2019-05-07
Release date:2020-04-29
Last modified:2020-05-20
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Context-Dependent Stabilizing Interactions among Solvent-Exposed Residues along the Surface of a Trimeric Helix Bundle.
Biochemistry, 59, 2020
3DSR
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BU of 3dsr by Molmil
ADP in transition binding site in the subunit B of the energy converter A1Ao ATP synthase
Descriptor: ADENOSINE-5'-DIPHOSPHATE, V-type ATP synthase beta chain
Authors:Kumar, A, Manimekalai, S.M.S, Balakrishna, A.M, Gruber, G.
Deposit date:2008-07-14
Release date:2009-06-16
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structure of the nucleotide-binding subunit B of the energy producer A1A0 ATP synthase in complex with adenosine diphosphate
Acta Crystallogr.,Sect.D, 64, 2008
6OVS
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BU of 6ovs by Molmil
Coiled-coil Trimer with Glu:Tyr:Lys Triad
Descriptor: Coiled-coil Trimer with Glu:Tyr:Lys Triad, PENTAETHYLENE GLYCOL
Authors:Smith, M.S, Stern, K.L, Billings, W.M, Price, J.L.
Deposit date:2019-05-08
Release date:2020-04-29
Last modified:2020-05-20
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Context-Dependent Stabilizing Interactions among Solvent-Exposed Residues along the Surface of a Trimeric Helix Bundle.
Biochemistry, 59, 2020
7LSZ
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BU of 7lsz by Molmil
Hsp90a N-terminal inhibitor
Descriptor: Heat shock protein HSP 90-alpha, {3-[(2,3-dihydro-1,4-benzodioxin-6-yl)sulfanyl]-4-hydroxyphenyl}(1,3-dihydro-2H-isoindol-2-yl)methanone
Authors:Balch, M, Peng, S, Deng, J, Matts, R.
Deposit date:2021-02-18
Release date:2021-03-03
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Selective Inhibition of the Hsp90 alpha Isoform.
Angew.Chem.Int.Ed.Engl., 60, 2021

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