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PDB: 51964 件
5MTZ
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Crystal structure of a long form RNase Z from yeast
分子名称: PHOSPHATE ION, Ribonuclease Z, ZINC ION
著者Li de la Sierra-Gallay, I, Miao, M, van Tilbeurgh, H.
登録日2017-01-11
公開日2017-06-21
最終更新日2018-01-31
実験手法X-RAY DIFFRACTION (2.99 Å)
主引用文献The crystal structure of Trz1, the long form RNase Z from yeast.
Nucleic Acids Res., 45, 2017
1JJ0
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CRYSTAL STRUCTURE OF TETRAGONAL LYSOZYME GROWN IN PRESENCE of 30% SUCROSE
分子名称: LYSOZYME, beta-D-fructofuranose-(2-1)-alpha-D-glucopyranose
著者Datta, S, Biswal, B.K, Vijayan, M.
登録日2001-07-03
公開日2001-11-02
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献The effect of stabilizing additives on the structure and hydration of proteins: a study involving tetragonal lysozyme.
Acta Crystallogr.,Sect.D, 57, 2001
2MKO
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BU of 2mko by Molmil
G-triplex structure and formation propensity
分子名称: DNA_(5'-D(*GP*GP*TP*TP*GP*GP*TP*GP*TP*GP*G)-3'), POTASSIUM ION
著者Cerofolini, L, Fragai, M, Giachetti, A, Limongelli, V, Luchinat, C, Novellino, E, Parrinello, M, Randazzo, A.
登録日2014-02-11
公開日2014-11-19
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献G-triplex structure and formation propensity.
Nucleic Acids Res., 42, 2014
5ULD
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BU of 5uld by Molmil
Structure and function of the divalent anion/Na+ symporter from Vibrio cholerae and a humanized variant
分子名称: CITRIC ACID, SODIUM ION, Transporter, ...
著者Lu, M.
登録日2017-01-24
公開日2017-05-17
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.78 Å)
主引用文献Structure and function of the divalent anion/Na(+) symporter from Vibrio cholerae and a humanized variant.
Nat Commun, 8, 2017
2MDZ
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BU of 2mdz by Molmil
NMR structure of the Paracoccus denitrificans Z-subunit determined in the presence of ADP
分子名称: Uncharacterized protein
著者Serrano, P, Geralt, M, Wuthrich, K, Morales-Rios, E, Zarco-Zavala, M, Garcia-Trejo, J.J, Dutta, S.K, Joint Center for Structural Genomics (JCSG)
登録日2013-09-20
公開日2013-10-09
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献NMR structure of the putative ATPase regulatory protein YP_916642.1 from Paracoccus denitrificans
To be Published
6HLK
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BU of 6hlk by Molmil
Hijacking the Hijackers: Escherichia coli Pathogenicity Islands Redirect Helper Phage Packaging for Their Own Benefit.
分子名称: Redirecting phage packaging protein C (RppC)
著者Penades, J.R, Bacarizo, J, Marina, A, Alqasmi, M, Fillol-Salom, A, Roszak, A.W, Ciges-Tomas, J.R.
登録日2018-09-11
公開日2019-07-31
最終更新日2019-09-18
実験手法X-RAY DIFFRACTION (2.42 Å)
主引用文献Hijacking the Hijackers: Escherichia coli Pathogenicity Islands Redirect Helper Phage Packaging for Their Own Benefit.
Mol.Cell, 75, 2019
7NK5
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BU of 7nk5 by Molmil
14-3-3 sigma with RelA/p65 binding site pS45 and covalently bound TCF521-124
分子名称: 1-(4-methylphenyl)sulfonyl-4-(2-methylpropyl)piperazine, 14-3-3 protein sigma, CALCIUM ION, ...
著者Wolter, M, Ottmann, C.
登録日2021-02-17
公開日2021-06-09
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献An Exploration of Chemical Properties Required for Cooperative Stabilization of the 14-3-3 Interaction with NF-kappa B-Utilizing a Reversible Covalent Tethering Approach.
J.Med.Chem., 64, 2021
7NM1
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14-3-3 sigma with RelA/p65 binding site pS45 and covalently bound TCF521-126
分子名称: 14-3-3 protein sigma, 4-(4-pyrrolidin-1-ylpiperidin-1-yl)sulfonylbenzaldehyde, CALCIUM ION, ...
著者Wolter, M, Ottmann, C.
登録日2021-02-23
公開日2021-06-09
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献An Exploration of Chemical Properties Required for Cooperative Stabilization of the 14-3-3 Interaction with NF-kappa B-Utilizing a Reversible Covalent Tethering Approach.
J.Med.Chem., 64, 2021
2M1I
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BU of 2m1i by Molmil
High resolution structure and dynamics of CsPinA parvulin at physiological temperature
分子名称: Parvulin-like peptidyl-prolyl isomerase
著者Jaremko, L, Jaremko, M, Zweckstetter, M, Bayer, P, Ejchart, A.
登録日2012-11-28
公開日2013-12-04
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献High resolution structure and dynamics of CsPinA parvulin at physiological temperature
To be Published
7NLE
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BU of 7nle by Molmil
14-3-3 sigma with RelA/p65 binding site pS45 and covalently bound TCF521-118
分子名称: 14-3-3 protein sigma, 4-(4-methylpiperazin-1-yl)sulfonylbenzaldehyde, CHLORIDE ION, ...
著者Wolter, M, Ottmann, C.
登録日2021-02-22
公開日2021-06-09
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献An Exploration of Chemical Properties Required for Cooperative Stabilization of the 14-3-3 Interaction with NF-kappa B-Utilizing a Reversible Covalent Tethering Approach.
J.Med.Chem., 64, 2021
6BD4
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BU of 6bd4 by Molmil
Crystal structure of human apo-Frizzled4 receptor
分子名称: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, Frizzled-4/Rubredoxin chimeric protein, OLEIC ACID, ...
著者Yang, S, Wu, Y, Pu, M, Chen, Y, Dong, S, Guo, Y, Han, G.Y, Stevens, R.C, Zhao, S, Xu, F.
登録日2017-10-21
公開日2018-08-22
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystal structure of the Frizzled 4 receptor in a ligand-free state.
Nature, 560, 2018
7NLA
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BU of 7nla by Molmil
14-3-3 sigma with RelA/p65 binding site pS45 and covalently bound TCF521-119
分子名称: 14-3-3 protein sigma, CALCIUM ION, CHLORIDE ION, ...
著者Wolter, M, Ottmann, C.
登録日2021-02-22
公開日2021-06-09
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献An Exploration of Chemical Properties Required for Cooperative Stabilization of the 14-3-3 Interaction with NF-kappa B-Utilizing a Reversible Covalent Tethering Approach.
J.Med.Chem., 64, 2021
6AQT
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BU of 6aqt by Molmil
Crystal Structure of Z-DNA with 6-fold Twinning_Z3A
分子名称: DNA (5'-D(*CP*GP*CP*GP*CP*G)-3')
著者Luo, Z, Dauter, Z, Gilski, M.
登録日2017-08-21
公開日2017-08-30
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.05 Å)
主引用文献Four highly pseudosymmetric and/or twinned structures of d(CGCGCG)2 extend the repertoire of crystal structures of Z-DNA.
Acta Crystallogr D Struct Biol, 73, 2017
1K1G
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BU of 1k1g by Molmil
STRUCTURAL BASIS FOR RECOGNITION OF THE INTRON BRANCH SITE RNA BY SPLICING FACTOR 1
分子名称: 5'-R(*UP*AP*UP*AP*CP*UP*AP*AP*CP*AP*A)-3', SF1-Bo isoform
著者Liu, Z, Luyten, I, Bottomley, M.J, Messias, A.C, Houngninou-Molango, S, Sprangers, R, Zanier, K, Kramer, A, Sattler, M.
登録日2001-09-25
公開日2001-11-07
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Structural basis for recognition of the intron branch site RNA by splicing factor 1.
Science, 294, 2001
6AQW
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Crystal Structure of Z-DNA with 6-fold Twinning_Z4A
分子名称: DNA (5'-D(*CP*GP*CP*GP*CP*G)-3')
著者Luo, Z, Dauter, Z, Gilski, M.
登録日2017-08-21
公開日2017-08-30
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Four highly pseudosymmetric and/or twinned structures of d(CGCGCG)2 extend the repertoire of crystal structures of Z-DNA.
Acta Crystallogr D Struct Biol, 73, 2017
7NM9
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BU of 7nm9 by Molmil
14-3-3 sigma with RelA/p65 binding site pS45 and covalently bound TCF521-110
分子名称: 14-3-3 protein sigma, 6-(2-bromanylimidazol-1-yl)pyridine-3-carbaldehyde, DI(HYDROXYETHYL)ETHER, ...
著者Wolter, M, Ottmann, C.
登録日2021-02-23
公開日2021-06-09
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献An Exploration of Chemical Properties Required for Cooperative Stabilization of the 14-3-3 Interaction with NF-kappa B-Utilizing a Reversible Covalent Tethering Approach.
J.Med.Chem., 64, 2021
7KER
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BU of 7ker by Molmil
avibactam-CDD-1 45 minute complex
分子名称: (2S,5R)-1-formyl-5-[(sulfooxy)amino]piperidine-2-carboxamide, (2S,5R)-7-oxo-6-(sulfooxy)-1,6-diazabicyclo[3.2.1]octane-2-carboxamide, (4S)-2-METHYL-2,4-PENTANEDIOL, ...
著者Smith, C.A, Vakulenko, S.B, Stewart, N.K, Toth, M.
登録日2020-10-12
公開日2021-01-20
最終更新日2021-05-26
実験手法X-RAY DIFFRACTION (1.93 Å)
主引用文献Inhibition of the Clostridioides difficile Class D beta-Lactamase CDD-1 by Avibactam.
Acs Infect Dis., 7, 2021
2M35
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BU of 2m35 by Molmil
NMR study of k-Ssm1a
分子名称: k-Ssm1a
著者King, G.F, Undheim, E.A, Mobli, M, Yang, S, Rong, M, Lai, R.
登録日2013-01-09
公開日2014-01-15
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献NMR study of k-Ssm1a
To be Published
6AR6
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BU of 6ar6 by Molmil
Clostridioides difficile toxinB with DLD-4 darpin
分子名称: DLD-4 darpin, Toxin B
著者Zhang, J, Jiang, M.
登録日2017-08-21
公開日2018-08-22
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (9 Å)
主引用文献Clostridioides difficile toxinB with DLD-4 darpin
To Be Published
7NK3
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14-3-3 sigma with RelA/p65 binding site pS45 and covalently bound TCF521-128
分子名称: 14-3-3 protein sigma, 2-(4-methylphenyl)sulfonyl-3,4-dihydro-1~{H}-isoquinoline, CALCIUM ION, ...
著者Wolter, M, Ottmann, C.
登録日2021-02-17
公開日2021-06-09
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献An Exploration of Chemical Properties Required for Cooperative Stabilization of the 14-3-3 Interaction with NF-kappa B-Utilizing a Reversible Covalent Tethering Approach.
J.Med.Chem., 64, 2021
7NJ9
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14-3-3 sigma with RelA/p65 binding site pS45 and covalently bound TCF521-133
分子名称: 14-3-3 protein sigma, 4-(3,4-dihydro-2~{H}-quinolin-1-ylsulfonyl)benzaldehyde, DI(HYDROXYETHYL)ETHER, ...
著者Wolter, M, Ottmann, C.
登録日2021-02-16
公開日2021-06-09
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献An Exploration of Chemical Properties Required for Cooperative Stabilization of the 14-3-3 Interaction with NF-kappa B-Utilizing a Reversible Covalent Tethering Approach.
J.Med.Chem., 64, 2021
7NJB
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14-3-3 sigma with RelA/p65 binding site pS45 and covalently bound TCF521-132
分子名称: 14-3-3 protein sigma, 4-piperidin-1-ylsulfonylbenzaldehyde, CHLORIDE ION, ...
著者Wolter, M, Ottmann, C.
登録日2021-02-16
公開日2021-06-09
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献An Exploration of Chemical Properties Required for Cooperative Stabilization of the 14-3-3 Interaction with NF-kappa B-Utilizing a Reversible Covalent Tethering Approach.
J.Med.Chem., 64, 2021
7NIF
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14-3-3 sigma with Pin1 binding site pS72 and covalently bound TCF521-011
分子名称: 1-(4-methylphenyl)imidazole, 14-3-3 protein sigma, CALCIUM ION, ...
著者Wolter, M, Dijck, L.v, Cossar, P.J, Ottmann, C.
登録日2021-02-12
公開日2021-06-16
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.71 Å)
主引用文献Reversible Covalent Imine-Tethering for Selective Stabilization of 14-3-3 Hub Protein Interactions.
J.Am.Chem.Soc., 143, 2021
7KIS
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BU of 7kis by Molmil
Crystal structure of Pseudomonas aeruginosa PBP2 in complex with WCK 5153
分子名称: (2S,5R)-1-formyl-N'-[(3R)-pyrrolidine-3-carbonyl]-5-[(sulfooxy)amino]piperidine-2-carbohydrazide, CHLORIDE ION, Peptidoglycan D,D-transpeptidase MrdA
著者Rajavel, M, van den Akker, F.
登録日2020-10-24
公開日2021-01-13
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.869 Å)
主引用文献Structural Characterization of Diazabicyclooctane beta-Lactam "Enhancers" in Complex with Penicillin-Binding Proteins PBP2 and PBP3 of Pseudomonas aeruginosa.
Mbio, 12, 2021
7KNH
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Cryo-EM Structure of Double ACE2-Bound SARS-CoV-2 Trimer Spike at pH 5.5
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Angiotensin-converting enzyme 2, ...
著者Gorman, J, Rapp, M, Kwong, P.D, Shapiro, L.
登録日2020-11-04
公開日2020-12-16
最終更新日2021-12-15
実験手法ELECTRON MICROSCOPY (3.74 Å)
主引用文献Cryo-EM Structures of SARS-CoV-2 Spike without and with ACE2 Reveal a pH-Dependent Switch to Mediate Endosomal Positioning of Receptor-Binding Domains.
Cell Host Microbe, 28, 2020

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件を2024-10-09に公開中

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