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PDB: 52230 件

8GYI
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Crystal structure of Fic25 (holo form) from Streptomyces ficellus
分子名称: DegT/DnrJ/EryC1/StrS family aminotransferase, GLYCEROL, IMIDAZOLE, ...
著者Kurosawa, S, Yoshida, A, Tomita, T, Nishiyama, M.
登録日2022-09-22
公開日2023-02-22
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.93 Å)
主引用文献Mechanisms of Sugar Aminotransferase-like Enzymes to Synthesize Stereoisomers of Non-proteinogenic Amino Acids in Natural Product Biosynthesis.
Acs Chem.Biol., 18, 2023
3AOX
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X-ray crystal structure of human anaplastic lymphoma kinase in complex with CH5424802
分子名称: 1,2-ETHANEDIOL, 9-ethyl-6,6-dimethyl-8-[4-(morpholin-4-yl)piperidin-1-yl]-11-oxo-6,11-dihydro-5H-benzo[b]carbazole-3-carbonitrile, ALK tyrosine kinase receptor
著者Nagel, S, Moertl, M, Jestel, A, Fukami, T.A.
登録日2010-10-08
公開日2011-05-25
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献CH5424802, a selective ALK inhibitor capable of blocking the resistant gatekeeper mutant
Cancer Cell, 19, 2011
8GYJ
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Crystal structure of Fic25 complexed with PLP-(5S,6S)-N2-acetyl-DADH adduct from Streptomyces ficellus
分子名称: (2~{S},5~{S},6~{S})-2-acetamido-6-[[2-methyl-3-oxidanyl-5-(phosphonooxymethyl)pyridin-4-yl]methylamino]-5,7-bis(oxidanyl)heptanoic acid, DegT/DnrJ/EryC1/StrS family aminotransferase, GLYCEROL, ...
著者Kurosawa, S, Yoshida, A, Tomita, T, Nishiyama, M.
登録日2022-09-22
公開日2023-02-22
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.82 Å)
主引用文献Mechanisms of Sugar Aminotransferase-like Enzymes to Synthesize Stereoisomers of Non-proteinogenic Amino Acids in Natural Product Biosynthesis.
Acs Chem.Biol., 18, 2023
5YP1
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Crystal structure of dipeptidyl peptidase IV (DPP IV) from Pseudoxanthomonas mexicana WO24
分子名称: Dipeptidyl aminopeptidase 4, GLYCEROL
著者Roppongi, S, Suzuki, Y, Tateoka, C, Fuimoto, M, Morisawa, S, Iizuka, I, Nakamura, A, Honma, N, Shida, Y, Ogasawara, W, Tanaka, N, Sakamoto, Y, Nonaka, T.
登録日2017-11-01
公開日2018-02-21
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.47 Å)
主引用文献Crystal structures of a bacterial dipeptidyl peptidase IV reveal a novel substrate recognition mechanism distinct from that of mammalian orthologues.
Sci Rep, 8, 2018
6QXH
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Crystal structure of His-tag human thymidylate synthase (HT-hTS) in complex with dUMP
分子名称: 2'-DEOXYURIDINE 5'-MONOPHOSPHATE, CHLORIDE ION, DI(HYDROXYETHYL)ETHER, ...
著者Pozzi, C, Mangani, M.
登録日2019-03-07
公開日2019-04-10
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.04 Å)
主引用文献Structural Comparison ofEnterococcus faecalisand Human Thymidylate Synthase Complexes with the Substrate dUMP and Its Analogue FdUMP Provides Hints about Enzyme Conformational Variabilities.
Molecules, 24, 2019
6QYA
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Crystal structure of Enteroccocus faecalis thymidylate synthase (EfTS) in complex with dUMP
分子名称: 1,2-ETHANEDIOL, 2'-DEOXYURIDINE 5'-MONOPHOSPHATE, CHLORIDE ION, ...
著者Pozzi, C, Mangani, M.
登録日2019-03-08
公開日2019-04-10
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.76 Å)
主引用文献Structural Comparison ofEnterococcus faecalisand Human Thymidylate Synthase Complexes with the Substrate dUMP and Its Analogue FdUMP Provides Hints about Enzyme Conformational Variabilities.
Molecules, 24, 2019
1M15
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Transition state structure of arginine kinase
分子名称: ADENOSINE-5'-DIPHOSPHATE, ARGININE, MAGNESIUM ION, ...
著者Yousef, M.S, Fabiola, F, Gattis, J.L, Somasundaram, T, Chapman, M.S.
登録日2002-06-17
公開日2002-12-04
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献Refinement of the arginine kinase transition-state analogue complex at 1.2 A resolution: mechanistic insights.
Acta Crystallogr.,Sect.D, 58, 2002
8VTT
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Meis1 homeobox domain bound to neomycin fragment
分子名称: Homeobox protein Meis1, RIBOSTAMYCIN, SULFATE ION
著者Tomchick, D.R, Ahmed, M.S, Nguyen, N.U.N, Sadek, H.A.
登録日2024-01-27
公開日2024-02-14
最終更新日2024-09-11
実験手法X-RAY DIFFRACTION (2.45 Å)
主引用文献Identification of FDA-approved drugs that induce heart regeneration in mammals.
Nat Cardiovasc Res, 3, 2024
8VTS
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Meis1 homeobox domain bound to paromomycin fragment
分子名称: 1,2-ETHANEDIOL, Homeobox protein Meis1, ISOPROPYL ALCOHOL, ...
著者Tomchick, D.R, Ahmed, M.S, Nguyen, N.U.N.
登録日2024-01-27
公開日2024-02-14
最終更新日2024-09-11
実験手法X-RAY DIFFRACTION (1.91 Å)
主引用文献Identification of FDA-approved drugs that induce heart regeneration in mammals.
Nat Cardiovasc Res, 3, 2024
8RAO
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Structure of Sen1-ADP.BeF3-RNA complex
分子名称: ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, Helicase SEN1, ...
著者Rengachari, S, Lidscreiber, M, Cramer, P.
登録日2023-12-01
公開日2024-10-30
実験手法ELECTRON MICROSCOPY (4.4 Å)
主引用文献Mechanism of polyadenylation-independent RNA polymerase II termination.
Nat.Struct.Mol.Biol., 2024
8R53
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The complex of Glycogen Phosphorylase with (-)-Epigallocatechin-3-gallate (EGCG) and glucose.
分子名称: (2R,3R)-5,7-dihydroxy-2-(3,4,5-trihydroxyphenyl)-3,4-dihydro-2H-chromen-3-yl 3,4,5-trihydroxybenzoate, DIMETHYL SULFOXIDE, Glycogen phosphorylase, ...
著者Alexopoulos, S, Papakostopoulou, S, Koulas, M.S, Leonidas, D.D, Skamnaki, V.
登録日2023-11-15
公開日2024-10-30
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Evidence for the Quercetin Binding Site of Glycogen Phosphorylase as a Target for Liver-Isoform-Selective Inhibitors against Glioblastoma: Investigation of Flavanols Epigallocatechin Gallate and Epigallocatechin.
J.Agric.Food Chem., 2024
8R6V
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The complex of glycogen phosphorylase with EGCG (epigallocatechin gallate) and caffeine.
分子名称: (2R,3R)-5,7-dihydroxy-2-(3,4,5-trihydroxyphenyl)-3,4-dihydro-2H-chromen-3-yl 3,4,5-trihydroxybenzoate, CAFFEINE, DIMETHYL SULFOXIDE, ...
著者Alexopoulos, S, Papakostopoulou, S, Koulas, M.S, Leonidas, D.D, Skamnaki, V.
登録日2023-11-23
公開日2024-10-30
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Evidence for the Quercetin Binding Site of Glycogen Phosphorylase as a Target for Liver-Isoform-Selective Inhibitors against Glioblastoma: Investigation of Flavanols Epigallocatechin Gallate and Epigallocatechin.
J.Agric.Food Chem., 2024
8RAP
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Structure of Sen1-ADP.BeF3 bound RNA Polymerase II pre-termination complex
分子名称: ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, DNA-directed RNA polymerase II subunit RPB1, ...
著者Rengachari, S, Lidscreiber, M, Cramer, P.
登録日2023-12-01
公開日2024-10-30
実験手法ELECTRON MICROSCOPY (4.3 Å)
主引用文献Mechanism of polyadenylation-independent RNA polymerase II termination.
Nat.Struct.Mol.Biol., 2024
6QXG
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Crystal structure of His-tag human thymidylate synthase (HT-hTS) in complex with FdUMP
分子名称: 5-FLUORO-2'-DEOXYURIDINE-5'-MONOPHOSPHATE, SULFATE ION, Thymidylate synthase
著者Pozzi, C, Mangani, M.
登録日2019-03-07
公開日2019-04-10
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.08 Å)
主引用文献Structural Comparison ofEnterococcus faecalisand Human Thymidylate Synthase Complexes with the Substrate dUMP and Its Analogue FdUMP Provides Hints about Enzyme Conformational Variabilities.
Molecules, 24, 2019
8RAM
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Structure of Sen1 bound RNA Polymerase II pre-termination complex
分子名称: DNA-directed RNA polymerase II subunit RPB1, DNA-directed RNA polymerase II subunit RPB11, DNA-directed RNA polymerase II subunit RPB2, ...
著者Rengachari, S, Lidscreiber, M, Cramer, P.
登録日2023-12-01
公開日2024-10-30
実験手法ELECTRON MICROSCOPY (2.8 Å)
主引用文献Mechanism of polyadenylation-independent RNA polymerase II termination.
Nat.Struct.Mol.Biol., 2024
6QXS
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Crystal structure of Enteroccocus faecalis thymidylate synthase (EfTS) in complex with FdUMP
分子名称: 5-FLUORO-2'-DEOXYURIDINE-5'-MONOPHOSPHATE, N-[4-({[(6S)-2-amino-5-formyl-4-oxo-3,4,5,6,7,8-hexahydropteridin-6-yl]methyl}amino)benzoyl]-L-glutamic acid, SULFATE ION, ...
著者Pozzi, C, Mangani, M.
登録日2019-03-07
公開日2019-04-10
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.88 Å)
主引用文献Structural Comparison ofEnterococcus faecalisand Human Thymidylate Synthase Complexes with the Substrate dUMP and Its Analogue FdUMP Provides Hints about Enzyme Conformational Variabilities.
Molecules, 24, 2019
8SK6
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human liver mitochondrial Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase
分子名称: Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial
著者Zhang, Z, Tringides, M.
登録日2023-04-18
公開日2024-02-21
実験手法ELECTRON MICROSCOPY (2.96 Å)
主引用文献High-Resolution Structural Proteomics of Mitochondria Using the 'Build and Retrieve' Methodology.
Mol.Cell Proteomics, 22, 2023
8HEF
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The Crystal structure of deuterated S-217622 (Ensitrelvir) bound to the main protease (3CLpro/Mpro) of SARS-CoV-2
分子名称: 3C-like proteinase, 6-[(6-chloranyl-2-methyl-indazol-5-yl)amino]-3-[(1-methyl-1,2,4-triazol-3-yl)methyl]-1-[[2,4,5-tris(fluoranyl)phenyl]methyl]-1,3,5-triazine-2,4-dione, GLYCEROL
著者Yan, M, Zhang, H.
登録日2022-11-08
公開日2023-04-19
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.51 Å)
主引用文献Synthesis of deuterated S-217622 (Ensitrelvir) with antiviral activity against coronaviruses including SARS-CoV-2.
Antiviral Res., 213, 2023
5YP6
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RORgamma (263-509) complexed with SRC2 and Compound 6
分子名称: N-[3'-cyano-4'-(2-methylpropyl)-2-(trifluoromethyl)biphenyl-4-yl]-2-[4-(ethylsulfonyl)phenyl]acetamide, Nuclear receptor ROR-gamma, SRC2
著者Gao, M, Cai, W.
登録日2017-11-01
公開日2018-02-07
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献From ROR gamma t Agonist to Two Types of ROR gamma t Inverse Agonists
ACS Med Chem Lett, 9, 2018
3AV2
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The human nucleosome structure containing the histone variant H3.3
分子名称: 146-MER DNA, Histone H2A type 1-B/E, Histone H2B type 1-J, ...
著者Tachiwana, H, Osakabe, A, Shiga, T, Miya, M, Kimura, H, Kagawa, W, Kurumizaka, H.
登録日2011-02-18
公開日2011-06-01
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structures of human nucleosomes containing major histone H3 variants
Acta Crystallogr.,Sect.D, 67, 2011
6QTL
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Caffeine recognizing nanobody
分子名称: CAFFEINE, VHH
著者Lesne, J, Guichou, J.F, Labesse, G, Cohen-Gonsaud, M.
登録日2019-02-25
公開日2019-04-10
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Structural basis for chemically-induced homodimerization of a single domain antibody
To Be Published
3OT7
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Escherichia coli apo-manganese superoxide dismutase
分子名称: Superoxide dismutase [Mn]
著者Whittaker, M.M, Lerch, T.F, Kirillova, O, Chapman, M.S, Whittaker, J.W.
登録日2010-09-10
公開日2010-12-22
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.901 Å)
主引用文献Subunit dissociation and metal binding by Escherichia coli apo-manganese superoxide dismutase.
Arch.Biochem.Biophys., 505, 2011
7COJ
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Crystal structure of the b-carbonic anhydrase CafA of the fungal pathogen Aspergillus fumigatus
分子名称: 5-ACETAMIDO-1,3,4-THIADIAZOLE-2-SULFONAMIDE, Carbonic anhydrase, ZINC ION
著者Jin, M.S, Kim, S, Yeon, J, Sung, J.
登録日2020-08-04
公開日2020-10-14
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal Structure of beta-Carbonic Anhydrase CafA from the Fungal Pathogen Aspergillus fumigatus .
Mol.Cells, 43, 2020
5Y0B
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PIG GASTRIC H+,K+ - ATPASE IN COMPLEX with BYK99
分子名称: Potassium-transporting ATPase alpha chain 1, Potassium-transporting ATPase subunit beta
著者Abe, K, Shimokawa, J, Natio, M, Munson, K, Vagin, O, Sachs, G, Suzuki, H, Tani, K, Fujiyoshi, Y.
登録日2017-07-16
公開日2017-08-09
最終更新日2024-11-06
実験手法ELECTRON CRYSTALLOGRAPHY (6.5 Å)
主引用文献The cryo-EM structure of gastric H(+),K(+)-ATPase with bound BYK99, a high-affinity member of K(+)-competitive, imidazo[1,2-a]pyridine inhibitors
Sci Rep, 7, 2017
8VI4
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TehA from Haemophilus influenzae purified in LMNG
分子名称: Tellurite resistance protein TehA homolog
著者Catalano, C, Senko, S, Tran, N.L, Lucier, K.W, Farwell, A.C, Silva, M.S, Dip, P.V, Poweleit, N, Scapin, G.
登録日2024-01-03
公開日2024-05-08
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献High-Resolution Cryo-Electron Microscopy Structure Determination of Haemophilus influenzae Tellurite-Resistance Protein A via 200 kV Transmission Electron Microscopy.
Int J Mol Sci, 25, 2024

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