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PDB: 51630 件

8V05
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Crystal structure of mouse PLD3
分子名称: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 5'-3' exonuclease PLD3, ...
著者Yuan, M, Zhu, X, Wilson, I.A.
登録日2023-11-17
公開日2024-03-13
最終更新日2024-06-19
実験手法X-RAY DIFFRACTION (2.08 Å)
主引用文献Structural and mechanistic insights into disease-associated endolysosomal exonucleases PLD3 and PLD4.
Structure, 32, 2024
6ZAK
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Room temperature XFEL Isopenicillin N synthase structure in complex with the Fe(IV)=O mimic VO and ACV.
分子名称: Isopenicillin N synthase, L-D-(A-AMINOADIPOYL)-L-CYSTEINYL-D-VALINE, SULFATE ION, ...
著者Rabe, P, Kamps, J.J.A.G, Sutherlin, K, Pharm, C, McDonough, M.A, Leissing, T.M, Aller, P, Butryn, A, Linyard, J, Lang, P, Brem, J, Fuller, F.D, Batyuk, A, Hunter, M.S, Pettinati, I, Clifton, I.J, Alonso-Mori, R, Gul, S, Young, I, Kim, I, Bhowmick, A, ORiordan, L, Brewster, A.S, Claridge, T.D.W, Sauter, N.K, Yachandra, V, Yano, J, Kern, J.F, Orville, A.M, Schofield, C.J.
登録日2020-06-05
公開日2022-01-12
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.54 Å)
主引用文献Room temperature XFEL Isopenicillin N synthase structure in complex with the Fe(IV)=O mimic VO and ACV.
To Be Published
8UJV
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Crystal structure of human polymerase eta with incoming dCMPnPP nucleotide opposite urea lesion
分子名称: 2'-deoxy-5'-O-[(R)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]cytidine, DNA (5'-D(*AP*GP*CP*GP*TP*CP*AP*T)-3'), DNA (5'-D(*CP*AP*TP*(UD8)P*AP*TP*GP*AP*CP*GP*CP*T)-3'), ...
著者Tomar, R, Egli, M, Stone, M.P.
登録日2023-10-11
公開日2024-03-20
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (2.23 Å)
主引用文献Replication Bypass of the N -(2-Deoxy-d-erythro-pentofuranosyl)-urea DNA Lesion by Human DNA Polymerase eta.
Biochemistry, 63, 2024
8V07
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Crystal structure of mouse PLD3 co-crystallized with 5'Pi-ssDNA for 30 days
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 5'-3' exonuclease PLD3, ...
著者Yuan, M, Wilson, I.A.
登録日2023-11-17
公開日2024-03-13
最終更新日2024-06-19
実験手法X-RAY DIFFRACTION (1.99 Å)
主引用文献Structural and mechanistic insights into disease-associated endolysosomal exonucleases PLD3 and PLD4.
Structure, 32, 2024
8YUT
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Cryo-EM structure of the amthamine-bound H2R-Gs complex
分子名称: 5-(2-azanylethyl)-4-methyl-1,3-thiazol-2-amine, CHOLESTEROL, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, ...
著者Shen, Q, Tang, X, Wen, X, Cheng, S, Xiao, P, Zang, S, Shen, D, Jiang, L, Zheng, Y, Zhang, H, Xu, H, Mao, C, Zhang, M, Hu, W, Sun, J, Chen, Z, Zhang, Y.
登録日2024-03-27
公開日2024-06-05
最終更新日2024-07-03
実験手法ELECTRON MICROSCOPY (2.7 Å)
主引用文献Molecular Determinant Underlying Selective Coupling of Primary G-Protein by Class A GPCRs.
Adv Sci, 11, 2024
7XLJ
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The crystal structure of ORE1(ANAC092) NAC domain
分子名称: NAC domain-containing protein 92
著者Chun, I.S, Kim, M.S.
登録日2022-04-21
公開日2023-03-29
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.45 Å)
主引用文献Structural basis of DNA binding by the NAC transcription factor ORE1, a master regulator of plant senescence.
Plant Commun., 4, 2023
7XBC
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The 0.92 angstrom X-ray structure of the human heart fatty acid-binding protein complexed with lignoceric acid
分子名称: 2-amino-2-deoxy-6-O-phosphono-alpha-D-glucopyranose, Fatty acid-binding protein, heart, ...
著者Sugiyama, S, Matsuoka, S, Tsuchikawa, H, Sonoyama, M, Inoue, Y, Hayashi, F, Murata, M.
登録日2022-03-21
公開日2023-03-29
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (0.92 Å)
主引用文献The 0.92 angstrom X-ray structure of the human heart fatty acid-binding protein complexed with lignoceric acid
To Be Published
8YUV
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Cryo-EM structure of the immepip-bound H3R-Gi complex
分子名称: 4-(1H-imidazol-5-ylmethyl)piperidine, CHOLESTEROL, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, ...
著者Shen, Q, Tang, X, Wen, X, Cheng, S, Xiao, P, Zang, S, Shen, D, Jiang, L, Zheng, Y, Zhang, H, Xu, H, Mao, C, Zhang, M, Hu, W, Sun, J, Chen, Z, Zhang, Y.
登録日2024-03-27
公開日2024-06-05
最終更新日2024-07-03
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Molecular Determinant Underlying Selective Coupling of Primary G-Protein by Class A GPCRs.
Adv Sci, 11, 2024
7OWB
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Chimeric carminomycin-4-O-methyltransferase (DnrK) with a region from 10-hydroxylase CalMB
分子名称: Carminomycin 4-O-methyltransferase DnrK,Methyltransferase domain-containing protein, S-ADENOSYL-L-HOMOCYSTEINE, methyl (1R,2R,4S)-2-ethyl-2,5,7-trihydroxy-6,11-dioxo-4-{[2,3,6-trideoxy-3-(dimethylamino)-alpha-L-lyxo-hexopyranosyl]oxy}-1,2,3,4,6,11-hexahydrotetracene-1-carboxylate
著者Dinis, P, MetsaKetela, M.
登録日2021-06-17
公開日2022-07-13
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.45 Å)
主引用文献Evolution-inspired engineering of anthracycline methyltransferases.
Pnas Nexus, 2, 2023
8Y5V
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GII.4 Sydney PD and 2'-FL
分子名称: 1,2-ETHANEDIOL, GII.4 Sydney PD in complex with 2'-FL (powder), alpha-L-fucopyranose-(1-2)-beta-D-galactopyranose-(1-4)-alpha-D-glucopyranose
著者Hansman, G, Tame, J.R.H, Kher, G, Pancera, M.
登録日2024-02-01
公開日2024-06-19
実験手法X-RAY DIFFRACTION (1.54 Å)
主引用文献GII.4 Sydney PD and 2'-FL
To Be Published
7XP3
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DNA complex form of ORESARA1(ANAC092) NAC Domain
分子名称: DNA (5'-D(*AP*GP*TP*TP*AP*CP*GP*TP*AP*CP*GP*GP*CP*AP*CP*AP*CP*GP*TP*AP*AP*C)-3'), DNA (5'-D(*TP*GP*TP*TP*AP*CP*GP*TP*GP*TP*GP*CP*CP*GP*TP*AP*CP*GP*TP*AP*AP*C)-3'), DNA (5'-D(P*CP*AP*CP*AP*CP*GP*TP*AP*AP*C)-3'), ...
著者Chun, I.S, Kim, M.S.
登録日2022-05-03
公開日2023-03-29
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (3.25 Å)
主引用文献Structural basis of DNA binding by the NAC transcription factor ORE1, a master regulator of plant senescence.
Plant Commun., 4, 2023
8WT9
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Cryo-EM structure of the IS621 recombinase in complex with bridge RNA, donor DNA, and target DNA in the post-strand exchange state (Holliday junction resolution)
分子名称: IS621 transposase, MAGNESIUM ION, bridge RNA, ...
著者Hiraizumi, M, Yamashita, K, Nishimasu, H.
登録日2023-10-18
公開日2024-06-26
最終更新日2024-07-17
実験手法ELECTRON MICROSCOPY (2.7 Å)
主引用文献Structural mechanism of bridge RNA-guided recombination.
Nature, 630, 2024
8WT7
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Cryo-EM structure of the IS621 recombinase in complex with bridge RNA, donor DNA, and target DNA in the pre-strand exchange locked state
分子名称: IS621 transposase, MAGNESIUM ION, bridge RNA, ...
著者Hiraizumi, M, Yamashita, K, Nishimasu, H.
登録日2023-10-18
公開日2024-06-26
最終更新日2024-07-17
実験手法ELECTRON MICROSCOPY (2.7 Å)
主引用文献Structural mechanism of bridge RNA-guided recombination.
Nature, 630, 2024
8WT6
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Cryo-EM structure of the IS621 recombinase in complex with bridge RNA, donor DNA, and target DNA in the pre-strand exchange state
分子名称: IS621 transposase, MAGNESIUM ION, bridge RNA, ...
著者Hiraizumi, M, Yamashita, K, Nishimasu, H.
登録日2023-10-18
公開日2024-06-26
最終更新日2024-07-17
実験手法ELECTRON MICROSCOPY (2.5 Å)
主引用文献Structural mechanism of bridge RNA-guided recombination.
Nature, 630, 2024
8WT8
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Cryo-EM structure of the IS621 recombinase in complex with bridge RNA, donor DNA, and target DNA in the post-strand exchange state (Holliday junction intermediate)
分子名称: IS621 transposase, MAGNESIUM ION, bridge RNA, ...
著者Hiraizumi, M, Yamashita, K, Nishimasu, H.
登録日2023-10-18
公開日2024-06-26
最終更新日2024-07-17
実験手法ELECTRON MICROSCOPY (2.9 Å)
主引用文献Structural mechanism of bridge RNA-guided recombination.
Nature, 630, 2024
7OY1
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DnrK mutant RTCR
分子名称: Carminomycin 4-O-methyltransferase DnrK,Methyltransferase domain-containing protein,Aclacinomycin 10-hydroxylase RdmB, S-ADENOSYL-L-HOMOCYSTEINE, methyl (1R,2R,4S)-2-ethyl-2,5,7-trihydroxy-6,11-dioxo-4-{[2,3,6-trideoxy-3-(dimethylamino)-alpha-L-lyxo-hexopyranosyl]oxy}-1,2,3,4,6,11-hexahydrotetracene-1-carboxylate
著者Dinis, P, MetsaKetela, M.
登録日2021-06-23
公開日2022-07-13
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.39 Å)
主引用文献Evolution-inspired engineering of anthracycline methyltransferases.
Pnas Nexus, 2, 2023
7OVK
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Protein kinase MKK7 in complex with 5-bromo-2-hydroxyphenyl-substituted pyrazolopyrimidine
分子名称: 1-[(3~{R})-3-[4-azanyl-3-[1-(5-bromanyl-2-oxidanyl-phenyl)-1,2,3-triazol-4-yl]pyrazolo[3,4-d]pyrimidin-1-yl]piperidin-1-yl]propan-1-one, Dual specificity mitogen-activated protein kinase kinase 7, GLYCEROL
著者Kleinboelting, S, Buehrmann, M, Mueller, M.P, Rauh, D.
登録日2021-06-15
公開日2022-07-20
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Optimization of Covalent MKK7 Inhibitors via Crude Nanomole-Scale Libraries.
J.Med.Chem., 65, 2022
7OVM
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Protein kinase MKK7 in complex with cyclobutyl-substituted indazole
分子名称: Dual specificity mitogen-activated protein kinase kinase 7, ~{N}-[(1-cyclobutyl-1,2,3-triazol-4-yl)methyl]-3-(1~{H}-indazol-3-yl)-5-(propanoylamino)benzamide
著者Buehrmann, M, Wiese, J.N, Mueller, M.P, Rauh, D.
登録日2021-06-15
公開日2022-07-20
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Optimization of Covalent MKK7 Inhibitors via Crude Nanomole-Scale Libraries.
J.Med.Chem., 65, 2022
7OVN
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Protein kinase MKK7 in complex with tolyl-substituted indazole
分子名称: 3-(1~{H}-indazol-3-yl)-~{N}-[[1-(2-methylphenyl)-1,2,3-triazol-4-yl]methyl]-5-(propanoylamino)benzamide, Dual specificity mitogen-activated protein kinase kinase 7
著者Buehrmann, M, Wiese, J.N, Mueller, M.P, Rauh, D.
登録日2021-06-15
公開日2022-07-20
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Optimization of Covalent MKK7 Inhibitors via Crude Nanomole-Scale Libraries.
J.Med.Chem., 65, 2022
7OVJ
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Protein kinase MKK7 in complex with difluoro-phenethyltriazole-substituted pyrazolopyrimidine
分子名称: 1-[(3~{R})-3-[4-azanyl-3-[1-[2,2-bis(fluoranyl)-2-phenyl-ethyl]-1,2,3-triazol-4-yl]pyrazolo[3,4-d]pyrimidin-1-yl]piperidin-1-yl]propan-1-one, Dual specificity mitogen-activated protein kinase kinase 7
著者Wiese, J.N, Buehrmann, M, Mueller, M.P, Rauh, D.
登録日2021-06-15
公開日2022-07-20
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Optimization of Covalent MKK7 Inhibitors via Crude Nanomole-Scale Libraries.
J.Med.Chem., 65, 2022
7OVI
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Protein kinase MKK7 in complex with phenethyltriazole-substituted pyrazolopyrimidine
分子名称: 1-[(3~{R})-3-[4-azanyl-3-[1-(2-phenylethyl)-1,2,3-triazol-4-yl]pyrazolo[3,4-d]pyrimidin-1-yl]piperidin-1-yl]propan-1-one, Dual specificity mitogen-activated protein kinase kinase 7
著者Kleinboelting, S, Buehrmann, M, Mueller, M.P, Rauh, D.
登録日2021-06-15
公開日2022-07-20
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Optimization of Covalent MKK7 Inhibitors via Crude Nanomole-Scale Libraries.
J.Med.Chem., 65, 2022
8XT1
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Cryo-EM structure of the human 39S mitoribosome with 5uM Tigecycline
分子名称: 16s rRNA, 39S ribosomal protein L22, mitochondrial, ...
著者Li, X, Wang, M, Cheng, J.
登録日2024-01-10
公開日2024-07-10
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Structural basis for differential inhibition of eukaryotic ribosomes by tigecycline.
Nat Commun, 15, 2024
7OVL
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Protein kinase MKK7 in complex with methoxycyclohexyl-substituted indazole
分子名称: 3-(2~{H}-indazol-3-yl)-~{N}-[[1-[(1~{R},2~{R})-2-methoxycyclohexyl]-1,2,3-triazol-4-yl]methyl]-5-(propanoylamino)benzamide, Dual specificity mitogen-activated protein kinase kinase 7
著者Buehrmann, M, Wiese, J.N, Mueller, M.P, Rauh, D.
登録日2021-06-15
公開日2022-07-20
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Optimization of Covalent MKK7 Inhibitors via Crude Nanomole-Scale Libraries.
J.Med.Chem., 65, 2022
8Y6D
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Norovirus GII.10 P domain and 2'-FL (tablet)
分子名称: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, GII.10 norovirus P domain in complex with 2'-FL (tablet), ...
著者Hansman, G, Tame, J.R.H, Kher, G, Pancera, M.
登録日2024-02-02
公開日2024-06-19
実験手法X-RAY DIFFRACTION (1.41 Å)
主引用文献Norovirus GII.10 P domain and 2'-FL (tablet)
To Be Published
8YIE
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Crystal structure of GH13_30 alpha-glucosidase CmmB in complex with acarbose
分子名称: 4,6-dideoxy-4-{[(1S,4R,5S,6S)-4,5,6-trihydroxy-3-(hydroxymethyl)cyclohex-2-en-1-yl]amino}-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose, Alpha-glucosidase
著者Saburi, W, Tagami, T, Yu, J, Ose, T, Yao, M, Mori, H.
登録日2024-02-29
公開日2024-07-03
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Molecular mechanism for the substrate specificity of Arthrobacter globiformis M6 alpha-glucosidase CmmB, belonging to glycoside hydrolase family 13 subfamily 30
Food Biosci, 61, 2024

224201

件を2024-08-28に公開中

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