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PDB: 52259 件

2V26
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Myosin VI (MD) pre-powerstroke state (Mg.ADP.VO4)
分子名称: 1,2-ETHANEDIOL, ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ...
著者Menetrey, J, Llinas, P, Mukherjea, M, Sweeney, H.L, Houdusse, A.
登録日2007-06-03
公開日2007-11-20
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献The Structural Basis for the Large Powerstroke of Myosin Vi.
Cell(Cambridge,Mass.), 131, 2007
4I7L
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T4 Lysozyme L99A/M102H with phenol bound
分子名称: 2-HYDROXYETHYL DISULFIDE, ACETATE ION, BETA-MERCAPTOETHANOL, ...
著者Merski, M, Shoichet, B.K.
登録日2012-11-30
公開日2013-04-03
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.52 Å)
主引用文献The impact of introducing a histidine into an apolar cavity site on docking and ligand recognition.
J.Med.Chem., 56, 2013
8AZ0
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BU of 8az0 by Molmil
IAPP S20G growth-phase fibril polymorph 2PF-L
分子名称: Islet amyloid polypeptide
著者Wilkinson, M, Xu, Y, Gallardo, R, Radford, S.E, Ranson, N.A.
登録日2022-09-05
公開日2024-01-10
最終更新日2024-11-06
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Structural evolution of fibril polymorphs during amyloid assembly.
Cell, 186, 2023
8AZ1
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IAPP S20G growth-phase fibril polymorph 2PF-C
分子名称: Islet amyloid polypeptide
著者Wilkinson, M, Xu, Y, Gallardo, R, Radford, S.E, Ranson, N.A.
登録日2022-09-05
公開日2024-01-10
最終更新日2024-11-13
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Structural evolution of fibril polymorphs during amyloid assembly.
Cell, 186, 2023
2VFE
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BU of 2vfe by Molmil
Crystal structure of F96S mutant of Plasmodium falciparum triosephosphate isomerase with 3- phosphoglycerate bound at the dimer interface
分子名称: 3-PHOSPHOGLYCERIC ACID, GLYCEROL, TRIOSEPHOSPHATE ISOMERASE
著者Gayathri, P, Banerjee, M, Vijayalakshmi, A, Balaram, H, Balaram, P, Murthy, M.R.N.
登録日2007-11-03
公開日2008-12-09
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Biochemical and Structural Characterization of Residue 96 Mutants of Plasmodium Falciparum Triosephosphate Isomerase: Active-Site Loop Conformation, Hydration and Identification of a Dimer-Interface Ligand-Binding Site.
Acta Crystallogr.,Sect.D, 65, 2009
4I9L
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BU of 4i9l by Molmil
Crystal structure of the D714A mutant of RB69 DNA polymerase
分子名称: CHLORIDE ION, DNA polymerase, GUANOSINE, ...
著者Jacewicz, A, Trzemecka, A, Guja, K.E, Plochocka, D, Yakubovskaya, E, Bebenek, A, Garcia-Diaz, M.
登録日2012-12-05
公開日2013-10-09
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献A Remote Palm Domain Residue of RB69 DNA Polymerase Is Critical for Enzyme Activity and Influences the Conformation of the Active Site.
Plos One, 8, 2013
2VG9
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BU of 2vg9 by Molmil
Crystal structure of Loop Swap mutant of Necallimastix patriciarum Xyn11A
分子名称: ACETATE ION, BIFUNCTIONAL ENDO-1,4-BETA-XYLANASE A, CADMIUM ION
著者Vardakou, M, Dumon, C, Flint, J.E, Murray, J.W, Christakopoulos, P, Weiner, D.P, Juge, N, Lewis, R.J, Gilbert, H.J.
登録日2007-11-09
公開日2007-12-25
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Understanding the Structural Basis for Substrate and Inhibitor Recognition in Eukaryotic Gh11 Xylanases.
J.Mol.Biol., 375, 2008
8AZ2
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IAPP S20G growth-phase fibril polymorph 3PF-CU
分子名称: Islet amyloid polypeptide
著者Wilkinson, M, Xu, Y, Gallardo, R, Radford, S.E, Ranson, N.A.
登録日2022-09-05
公開日2024-01-10
最終更新日2024-10-16
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Structural evolution of fibril polymorphs during amyloid assembly.
Cell, 186, 2023
4IAO
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BU of 4iao by Molmil
Crystal structure of Sir2 C543S mutant in complex with SID domain of Sir4
分子名称: ADENOSINE-5-DIPHOSPHORIBOSE, NAD-dependent histone deacetylase SIR2, Regulatory protein SIR4, ...
著者Hsu, H.C, Wang, C.L, Wang, M, Yang, N, Chen, Z, Sternglanz, R, Xu, R.M.
登録日2012-12-07
公開日2012-12-26
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.901 Å)
主引用文献Structural basis for allosteric stimulation of Sir2 activity by Sir4 binding
Genes Dev., 27, 2013
5CSQ
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BU of 5csq by Molmil
The structure of the NK1 fragment of HGF/SF complexed with MOPS
分子名称: 3[N-MORPHOLINO]PROPANE SULFONIC ACID, Hepatocyte growth factor
著者Sigurdardottir, A.G, Winter, A, Sobkowicz, A, Fragai, M, Chirgadze, D.Y, Ascher, D.B, Blundell, T.L, Gherardi, E.
登録日2015-07-23
公開日2015-08-12
最終更新日2024-11-13
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Exploring the chemical space of the lysine-binding pocket of the first kringle domain of hepatocyte growth factor/scatter factor (HGF/SF) yields a new class of inhibitors of HGF/SF-MET binding.
Chem Sci, 6, 2015
8BPP
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BU of 8bpp by Molmil
crystal structure of N-ethylmaleimide reductase (nemA) from Escherichia coli
分子名称: FLAVIN MONONUCLEOTIDE, N-ethylmaleimide reductase
著者Pfister, P, Tinzl, M, Erb, T.
登録日2022-11-17
公開日2024-02-28
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Development of the Biocatalytic Reductive Aldol Reaction
To Be Published
3NHB
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BU of 3nhb by Molmil
Nucleotide Binding Domain of Human ABCB6 (ADP bound structure)
分子名称: ADENOSINE-5'-DIPHOSPHATE, ATP-binding cassette sub-family B member 6, mitochondrial, ...
著者Haffke, M, Menzel, A, Carius, Y, Jahn, D, Heinz, D.W.
登録日2010-06-14
公開日2010-08-25
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Structures of the nucleotide-binding domain of the human ABCB6 transporter and its complexes with nucleotides.
Acta Crystallogr.,Sect.D, 66, 2010
5CPS
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Disproportionating enzyme 1 from Arabidopsis - maltotriose soak
分子名称: 1,2-ETHANEDIOL, 4-alpha-glucanotransferase DPE1, chloroplastic/amyloplastic, ...
著者O'Neill, E.C, Stevenson, C.E.M, Tantanarat, K, Latousakis, D, Donaldson, M.I, Rejzek, M, Limpaseni, T, Smith, A.M, Field, R.A, Lawson, D.M.
登録日2015-07-21
公開日2015-11-04
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural Dissection of the Maltodextrin Disproportionation Cycle of the Arabidopsis Plastidial Disproportionating Enzyme 1 (DPE1).
J.Biol.Chem., 290, 2015
8AZL
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BU of 8azl by Molmil
Structure of SARS-CoV-2 NSP3 macrodomain in complex with 2'-deoxy-2'-fluoro-ADPR
分子名称: 2'-deoxyadenosine 5'-fluoro-diphosphoribose, Papain-like protease nsp3
著者Sander, S, Tidow, H, Fliegert, R, Sandmann, M.
登録日2022-09-06
公開日2024-03-20
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structure of SARS-CoV-2 NSP3 macrodomain in complex with 2'-deoxy-2'-fluoro-ADPR
To Be Published
5CQ8
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BU of 5cq8 by Molmil
Crystal structure of the bromodomain of bromodomain adjacent to zinc finger domain protein 2B (BAZ2B) in complex with 4'-Hydroxyacetophenone (SGC - Diamond I04-1 fragment screening)
分子名称: 1,2-ETHANEDIOL, Bromodomain adjacent to zinc finger domain protein 2B, P-HYDROXYACETOPHENONE
著者Bradley, A, Pearce, N, Krojer, T, Ng, J, Talon, R, Vollmar, M, Jose, B, von Delft, F, Bountra, C, Arrowsmith, C.H, Edwards, A, Knapp, S, Structural Genomics Consortium (SGC)
登録日2015-07-21
公開日2015-09-09
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.651 Å)
主引用文献Crystal structure of the second bromodomain of bromodomain adjancent to zinc finger domain protein 2B (BAZ2B) in complex with 4'-Hydroxyacetophenone (SGC - Diamond I04-1 fragment screening)
To be published
1YW2
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BU of 1yw2 by Molmil
Mutated Mus Musculus P38 Kinase (mP38)
分子名称: 2-(ETHOXYMETHYL)-4-(4-FLUOROPHENYL)-3-[2-(2-HYDROXYPHENOXY)PYRIMIDIN-4-YL]ISOXAZOL-5(2H)-ONE, Mitogen-activated protein kinase 14
著者Laughlin, S.K, Clark, M.P, Djung, J.F, Golebiowski, A, Brugel, T.A, Sabat, M, Bookland, R.G, Laufersweiler, M.J, Vanrens, J.C, Townes, J.A, De, B, Hsieh, L.C, Xu, S.C, Walter, R.L, Mekel, M.J, Janusz, M.J.
登録日2005-02-16
公開日2005-05-10
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.01 Å)
主引用文献The development of new isoxazolone based inhibitors of tumor necrosis factor-alpha (TNF-alpha) production.
Bioorg.Med.Chem.Lett., 15, 2005
4I0C
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BU of 4i0c by Molmil
The structure of the camelid antibody cAbHuL5 in complex with human lysozyme
分子名称: CHLORIDE ION, GLYCEROL, Lysozyme C, ...
著者De Genst, E, Chan, P.H, Pardon, E, Kumita, J.R, Christodoulou, J, Menzer, L, Chirgadze, D.Y, Robinson, C.V, Muyldermans, S, Matagne, A, Wyns, L, Dobson, C.M, Dumoulin, M.
登録日2012-11-16
公開日2013-10-09
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献A nanobody binding to non-amyloidogenic regions of the protein human lysozyme enhances partial unfolding but inhibits amyloid fibril formation.
J.Phys.Chem.B, 117, 2013
8AZN
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BU of 8azn by Molmil
Structure of SARS-CoV-2 NSP3 macrodomain in complex with alpha-1-O-Me-ADPR
分子名称: Adenosine 5'-diphosphoric acid beta-[(3beta,4beta-dihydroxy-5beta-methoxytetrahydrofuran-2alpha-yl)methyl] estere, Papain-like protease nsp3
著者Sander, S, Tidow, H, Fliegert, R, Sandmann, M.
登録日2022-09-06
公開日2024-03-20
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Structure of SARS-CoV-2 NSP3 macrodomain in complex with alpha-1-O-Me-ADPR
To Be Published
8AZI
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BU of 8azi by Molmil
Structure of SARS-CoV-2 NSP3 macrodomain in complex with 2'-deoxy-ADPR
分子名称: 2'-deoxyadenosine 5'-diphosphoribose, Papain-like protease nsp3
著者Sander, S, Tidow, H, Fliegert, R, Sandmann, M.
登録日2022-09-06
公開日2024-03-20
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structure of SARS-CoV-2 NSP3 macrodomain in the apo form
To Be Published
1YXO
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BU of 1yxo by Molmil
Crystal Structure of pyridoxal phosphate biosynthetic protein PdxA PA0593
分子名称: 4-hydroxythreonine-4-phosphate dehydrogenase 1, ETHANOL, MAGNESIUM ION
著者Liu, Y, Xu, X, Dong, A, Kudritskam, M, Savchenko, A, Pai, E.F, Joachimiak, A, Edwards, A, Midwest Center for Structural Genomics (MCSG)
登録日2005-02-22
公開日2005-04-05
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (2.01 Å)
主引用文献Crystal Structure of pyridoxal phosphate biosynthetic protein PdxA PA0593
To be Published
8AZM
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BU of 8azm by Molmil
Structure of SARS-CoV-2 NSP3 macrodomain in complex with 8Br-ADPR
分子名称: 8-bromoadenosine 5'-diphosphoribose, Papain-like protease nsp3
著者Sander, S, Tidow, H, Fliegert, R, Sandmann, M.
登録日2022-09-06
公開日2024-03-20
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structure of SARS-CoV-2 NSP3 macrodomain in complex with 8Br-ADPR
To Be Published
8AZP
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Structure of SARS-CoV-2 NSP3 macrodomain in complex with beta-methyl-ADP
分子名称: Papain-like protease nsp3, beta-methyl-adenosine diphosphate
著者Sander, S, Tidow, H, Fliegert, R, Sandmann, M.
登録日2022-09-06
公開日2024-03-20
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Structure of SARS-CoV-2 NSP3 macrodomain in complex with beta-methyl-ADP
To Be Published
4I28
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BU of 4i28 by Molmil
Binary complex of mouse TdT with ssDNA and Zn++
分子名称: 5'-D(*AP*AP*AP*AP*A)-3', DNA nucleotidylexotransferase, MAGNESIUM ION, ...
著者Gouge, J, Delarue, M.
登録日2012-11-21
公開日2013-07-24
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Structures of Intermediates along the Catalytic Cycle of Terminal Deoxynucleotidyltransferase: Dynamical Aspects of the Two-Metal Ion Mechanism.
J.Mol.Biol., 425, 2013
2VCE
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BU of 2vce by Molmil
Characterization and engineering of the bifunctional N- and O- glucosyltransferase involved in xenobiotic metabolism in plants
分子名称: 1,2-ETHANEDIOL, 2,4,5-trichlorophenol, HYDROQUINONE GLUCOSYLTRANSFERASE, ...
著者Brazier-Hicks, M, Offen, W.A, Gershater, M.C, Revett, T.J, Lim, E.K, Bowles, D.J, Davies, G.J, Edwards, R.
登録日2007-09-20
公開日2007-10-16
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Characterization and Engineering of the Bifunctional N- and O-Glucosyltransferase Involved in Xenobiotic Metabolism in Plants.
Proc.Natl.Acad.Sci.USA, 104, 2007
8AZO
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BU of 8azo by Molmil
Structure of SARS-CoV-2 NSP3 macrodomain in complex with beta-ethyl-ADP
分子名称: Papain-like protease nsp3, beta-ethyl-adenosine diphosphate
著者Sander, S, Tidow, H, Fliegert, R, Sandmann, M.
登録日2022-09-06
公開日2024-03-20
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structure of SARS-CoV-2 NSP3 macrodomain in complex with beta-ethyl-ADP
To Be Published

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