Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 51689 件

3C6M
DownloadVisualize
BU of 3c6m by Molmil
Crystal structure of human spermine synthase in complex with spermine and 5-methylthioadenosine
分子名称: 5'-DEOXY-5'-METHYLTHIOADENOSINE, SPERMINE, Spermine synthase
著者Min, J, Wu, H, Zeng, H, Loppnau, P, Weigelt, J, Sundstrom, M, Arrowsmith, C.H, Edwards, A.M, Bochkarev, A, Pegg, A.E, Plotnikov, A.N, Structural Genomics Consortium (SGC)
登録日2008-02-04
公開日2008-02-19
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.45 Å)
主引用文献Crystal structure of human spermine synthase: implications of substrate binding and catalytic mechanism.
J.Biol.Chem., 283, 2008
3C6K
DownloadVisualize
BU of 3c6k by Molmil
Crystal structure of human spermine synthase in complex with spermidine and 5-methylthioadenosine
分子名称: 5'-DEOXY-5'-METHYLTHIOADENOSINE, SPERMIDINE, Spermine synthase
著者Min, J, Wu, H, Zeng, H, Loppnau, P, Weigelt, J, Sundstrom, M, Arrowsmith, C.H, Edwards, A.M, Bochkarev, A, Pegg, A.E, Plotnikov, A.N, Structural Genomics Consortium (SGC)
登録日2008-02-04
公開日2008-02-19
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Crystal structure of human spermine synthase: implications of substrate binding and catalytic mechanism.
J.Biol.Chem., 283, 2008
2MUN
DownloadVisualize
BU of 2mun by Molmil
Solution structure of mu-SLPTX3-Ssm6a
分子名称: Mu-scoloptoxin-Ssm6a
著者Undheim, E.A.B, King, G.F, Mobli, M.
登録日2014-09-13
公開日2015-06-24
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献Weaponization of a Hormone: Convergent Recruitment of Hyperglycemic Hormone into the Venom of Arthropod Predators.
Structure, 23, 2015
4NG8
DownloadVisualize
BU of 4ng8 by Molmil
Dialyzed HEW lysozyme batch crystallized in 1.9 M CsCl and collected at 100 K.
分子名称: CESIUM ION, CHLORIDE ION, Lysozyme C
著者Benas, P, Legrand, L, Ries-Kautt, M.
登録日2013-11-01
公開日2014-05-28
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.09 Å)
主引用文献Weak protein-cationic co-ion interactions addressed by X-ray crystallography and mass spectrometry.
Acta Crystallogr.,Sect.D, 70, 2014
4NIX
DownloadVisualize
BU of 4nix by Molmil
Crystal structure of trypsiligase (K60E/N143H/Y151H/D189K trypsin) orthorhombic form, zinc-bound
分子名称: CALCIUM ION, Cationic trypsin, GLYCEROL, ...
著者Schoepfel, M, Parthier, C, Stubbs, M.T.
登録日2013-11-08
公開日2014-02-19
最終更新日2014-03-19
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献N-terminal protein modification by substrate-activated reverse proteolysis.
Angew.Chem.Int.Ed.Engl., 53, 2014
3CA9
DownloadVisualize
BU of 3ca9 by Molmil
Evolution of chlorella virus dUTPase
分子名称: DEOXYURIDINE-5'-DIPHOSPHATE, Deoxyuridine triphosphatase, MAGNESIUM ION
著者Yamanishi, M, Homma, K, Zhang, Y, Etten, L.V.J, Moriyama, H.
登録日2008-02-19
公開日2009-03-03
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Crystallization and crystal-packing studies of Chlorella virus deoxyuridine triphosphatase.
Acta Crystallogr.,Sect.F, 65, 2009
1MF4
DownloadVisualize
BU of 1mf4 by Molmil
Structure-based design of potent and selective inhibitors of phospholipase A2: Crystal structure of the complex formed between phosholipase A2 from Naja Naja sagittifera and a designed peptide inhibitor at 1.9 A resolution
分子名称: CALCIUM ION, Phospholipase A2, VAL-ALA-PHE-ARG-SER
著者Singh, R.K, Vikram, P, Paramsivam, M, Jabeen, T, Sharma, S, Makker, J, Dey, S, Kaur, P, Srinivasan, A, Singh, T.P.
登録日2002-08-09
公開日2003-09-30
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Design of specific peptide inhibitors for group I phospholipase A2: structure of a complex formed between phospholipase A2 from Naja naja sagittifera (group I) and a designed peptide inhibitor Val-Ala-Phe-Arg-Ser (VAFRS) at 1.9 A resolution reveals unique features
Biochemistry, 42, 2003
1MFC
DownloadVisualize
BU of 1mfc by Molmil
HIGH RESOLUTION STRUCTURES OF ANTIBODY FAB FRAGMENT COMPLEXED WITH CELL-SURFACE OLIGOSACCHARIDE OF PATHOGENIC SALMONELLA
分子名称: IGG1-LAMBDA SE155-4 FAB (HEAVY CHAIN), IGG1-LAMBDA SE155-4 FAB (LIGHT CHAIN), alpha-D-galactopyranose-(1-2)-[alpha-D-Abequopyranose-(1-3)]alpha-D-mannopyranose-(1-4)-alpha-L-rhamnopyranose
著者Zdanov, A, Cygler, M.
登録日1993-10-25
公開日1994-01-31
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Recognition of a carbohydrate antigenic determinant of Salmonella by an antibody.
Biochem.Soc.Trans., 21, 1993
3CDD
DownloadVisualize
BU of 3cdd by Molmil
Crystal structure of prophage MuSo2, 43 kDa tail protein from Shewanella oneidensis
分子名称: Prophage MuSo2, 43 kDa tail protein
著者Chang, C, Evdokimova, E, Kudritska, M, Savchenko, A, Edwards, A.M, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
登録日2008-02-26
公開日2008-03-11
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal structure of prophage MuSo2, 43 kDa tail protein from Shewanella oneidensis.
To be Published
1MHN
DownloadVisualize
BU of 1mhn by Molmil
High resolution crystal structure of the SMN Tudor domain
分子名称: Survival motor neuron protein
著者Sprangers, R, Groves, M.R, Sinning, I, Sattler, M.
登録日2002-08-20
公開日2003-03-25
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献High Resolution X-ray and NMR Structures of the SMN Tudor Domain: conformational variation in the binding site for symmetrically dimethylated arginine residues
J.Mol.Biol., 327, 2003
1MKY
DownloadVisualize
BU of 1mky by Molmil
Structural Analysis of the Domain Interactions in Der, a Switch Protein Containing Two GTPase Domains
分子名称: GUANOSINE-5'-DIPHOSPHATE, PHOSPHATE ION, Probable GTP-binding protein engA
著者Robinson, V.L, Hwang, J, Fox, E, Inouye, M, Stock, A.M.
登録日2002-08-29
公開日2003-01-14
最終更新日2015-02-04
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Domain Arrangement of Der, a Switch Protein Containing Two GTPase Domains
Structure, 10, 2002
1MEK
DownloadVisualize
BU of 1mek by Molmil
HUMAN PROTEIN DISULFIDE ISOMERASE, NMR, 40 STRUCTURES
分子名称: PROTEIN DISULFIDE ISOMERASE
著者Kemmink, J, Darby, N.J, Dijkstra, K, Nilges, M, Creighton, T.E.
登録日1996-04-16
公開日1997-04-21
最終更新日2022-02-23
実験手法SOLUTION NMR
主引用文献Structure determination of the N-terminal thioredoxin-like domain of protein disulfide isomerase using multidimensional heteronuclear 13C/15N NMR spectroscopy.
Biochemistry, 35, 1996
4NWD
DownloadVisualize
BU of 4nwd by Molmil
Crystal structure of the kainate receptor GluK3 ligand-binding domain in complex with the agonist (2S,4R)-4-(3-Methylamino-3-oxopropyl)glutamic acid at 2.6 A resolution
分子名称: (4R)-4-[3-(methylamino)-3-oxopropyl]-L-glutamic acid, CHLORIDE ION, Glutamate receptor ionotropic, ...
著者Venskutonyte, R, Larsen, A.P, Frydenvang, K, Gajhede, M, Kastrup, J.S.
登録日2013-12-06
公開日2014-08-06
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Molecular Recognition of Two 2,4-syn-Functionalized (S)-Glutamate Analogues by the Kainate Receptor GluK3 Ligand Binding Domain.
Chemmedchem, 9, 2014
2QKU
DownloadVisualize
BU of 2qku by Molmil
The 5th PDZ Domain of InaD in 10mM DTT
分子名称: GLYCEROL, Inactivation-no-after-potential D protein
著者Ranganathan, R, Socolich, M, Wall, M.
登録日2007-07-11
公開日2007-11-06
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Dynamic Scaffolding in a G Protein-Coupled Signaling System.
Cell(Cambridge,Mass.), 131, 2007
2MSE
DownloadVisualize
BU of 2mse by Molmil
NMR data-driven model of GTPase KRas-GNP:ARafRBD complex tethered to a lipid-bilayer nanodisc
分子名称: 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, Apolipoprotein A-I, GTPase KRas, ...
著者Mazhab-Jafari, M, Stathopoulos, P, Marshall, C, Ikura, M.
登録日2014-07-29
公開日2015-06-03
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Oncogenic and RASopathy-associated K-RAS mutations relieve membrane-dependent occlusion of the effector-binding site.
Proc.Natl.Acad.Sci.USA, 112, 2015
2MSP
DownloadVisualize
BU of 2msp by Molmil
MAJOR SPERM PROTEIN, BETA ISOFORM, ENGINEERED C59S/T90C MUTANT, PUTATIVE SUBFILAMENT STRUCTURE, PH 8.5
分子名称: MAJOR SPERM PROTEIN
著者Bullock, T.L, Mccoy, A.J, Stewart, M.
登録日1997-12-19
公開日1998-04-15
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献Structural basis for amoeboid motility in nematode sperm.
Nat.Struct.Biol., 5, 1998
2MSC
DownloadVisualize
BU of 2msc by Molmil
NMR data-driven model of GTPase KRas-GDP tethered to a lipid-bilayer nanodisc
分子名称: 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, Apolipoprotein A-I, GTPase KRas, ...
著者Mazhab-Jafari, M, Stathopoulos, P, Marshall, C, Ikura, M.
登録日2014-07-29
公開日2015-06-03
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Oncogenic and RASopathy-associated K-RAS mutations relieve membrane-dependent occlusion of the effector-binding site.
Proc.Natl.Acad.Sci.USA, 112, 2015
2MUB
DownloadVisualize
BU of 2mub by Molmil
Solution structure of the analgesic sea anemone peptide APETx2
分子名称: Toxin APETx2
著者Mobli, M, King, G.F, Rosengren, K.J, Jensen, J.E.
登録日2014-09-07
公開日2014-12-24
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献Understanding the Molecular Basis of Toxin Promiscuity: The Analgesic Sea Anemone Peptide APETx2 Interacts with Acid-Sensing Ion Channel 3 and hERG Channels via Overlapping Pharmacophores.
J.Med.Chem., 57, 2014
2N4J
DownloadVisualize
BU of 2n4j by Molmil
Solution structure of a self complementary Xylonucleic Acid duplex
分子名称: XNA (5'-R(*(8XG)P*(8XU)P*(8XG)P*(8XU)P*(8XA)P*(8XC)P*(8XA)P*(8XC))-3')
著者Maiti, M, Lescrinier, E, Herdewijn, P.
登録日2015-06-19
公開日2015-07-29
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Xylonucleic acid: synthesis, structure, and orthogonal pairing properties.
Nucleic Acids Res., 43, 2015
7GQQ
DownloadVisualize
BU of 7gqq by Molmil
PanDDA analysis group deposition -- Crystal Structure of Enterovirus D68 3C Protease in complex with Z1198183601
分子名称: 5-chloro-1H-imidazole, DIMETHYL SULFOXIDE, Protease 3C
著者Lithgo, R.M, Fairhead, M, Koekemoer, L, Aschenbrenner, J.C, Balcomb, B.H, Godoy, A.S, Marples, P.G, Ni, X, Tomlinson, C.W.E, Thompson, W, Wild, C, Fearon, D, Walsh, M.A, von Delft, F.
登録日2023-08-24
公開日2023-11-29
実験手法X-RAY DIFFRACTION (1.44 Å)
主引用文献PanDDA analysis group deposition
To Be Published
7GQR
DownloadVisualize
BU of 7gqr by Molmil
PanDDA analysis group deposition -- Crystal Structure of Enterovirus D68 3C Protease in complex with Z235343929
分子名称: 2-chloro-1,3-benzoxazole, Protease 3C
著者Lithgo, R.M, Fairhead, M, Koekemoer, L, Aschenbrenner, J.C, Balcomb, B.H, Godoy, A.S, Marples, P.G, Ni, X, Tomlinson, C.W.E, Thompson, W, Wild, C, Fearon, D, Walsh, M.A, von Delft, F.
登録日2023-08-24
公開日2023-11-29
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献PanDDA analysis group deposition
To Be Published
7GO6
DownloadVisualize
BU of 7go6 by Molmil
PanDDA analysis group deposition -- Crystal Structure of Enterovirus D68 3C Protease in complex with Z1203586731
分子名称: 1-[(4S)-imidazo[1,2-a]pyridin-7-yl]methanamine, Protease 3C
著者Lithgo, R.M, Fairhead, M, Koekemoer, L, Aschenbrenner, J.C, Balcomb, B.H, Godoy, A.S, Marples, P.G, Ni, X, Tomlinson, C.W.E, Thompson, W, Wild, C, Fearon, D, Walsh, M.A, von Delft, F.
登録日2023-08-24
公開日2023-11-29
実験手法X-RAY DIFFRACTION (1.41 Å)
主引用文献PanDDA analysis group deposition
To Be Published
7GP8
DownloadVisualize
BU of 7gp8 by Molmil
PanDDA analysis group deposition -- Crystal Structure of Enterovirus D68 3C Protease in complex with Z53825177
分子名称: DIMETHYL SULFOXIDE, N-(2-fluorophenyl)ethanesulfonamide, Protease 3C
著者Lithgo, R.M, Fairhead, M, Koekemoer, L, Aschenbrenner, J.C, Balcomb, B.H, Godoy, A.S, Marples, P.G, Ni, X, Tomlinson, C.W.E, Thompson, W, Wild, C, Fearon, D, Walsh, M.A, von Delft, F.
登録日2023-08-24
公開日2023-11-29
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献PanDDA analysis group deposition
To Be Published
7GOA
DownloadVisualize
BU of 7goa by Molmil
PanDDA analysis group deposition -- Crystal Structure of Enterovirus D68 3C Protease in complex with Z1269184613
分子名称: 1,3-benzothiazole-6-sulfonamide, Protease 3C
著者Lithgo, R.M, Fairhead, M, Koekemoer, L, Aschenbrenner, J.C, Balcomb, B.H, Godoy, A.S, Marples, P.G, Ni, X, Tomlinson, C.W.E, Thompson, W, Wild, C, Fearon, D, Walsh, M.A, von Delft, F.
登録日2023-08-24
公開日2023-11-29
実験手法X-RAY DIFFRACTION (1.61 Å)
主引用文献PanDDA analysis group deposition
To Be Published
7GPD
DownloadVisualize
BU of 7gpd by Molmil
PanDDA analysis group deposition -- Crystal Structure of Enterovirus D68 3C Protease in complex with Z57472297
分子名称: 1-[2-methyl-1,3-bis(oxidanyl)propan-2-yl]-3-phenyl-urea, Protease 3C
著者Lithgo, R.M, Fairhead, M, Koekemoer, L, Aschenbrenner, J.C, Balcomb, B.H, Godoy, A.S, Marples, P.G, Ni, X, Tomlinson, C.W.E, Thompson, W, Wild, C, Fearon, D, Walsh, M.A, von Delft, F.
登録日2023-08-24
公開日2023-11-29
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献PanDDA analysis group deposition
To Be Published

224572

件を2024-09-04に公開中

PDB statisticsPDBj update infoContact PDBjnumon