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PDB: 51964 件

2PHN
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Crystal structure of an amide bond forming F420-gamma glutamyl ligase from Archaeoglobus fulgidus
分子名称: 1,2-ETHANEDIOL, ACETATE ION, F420-0:gamma-glutamyl ligase, ...
著者Nocek, B, Evdokimova, E, Kudritska, M, Edwards, A, Savchenko, A, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
登録日2007-04-11
公開日2007-05-15
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献Structure of an Amide Bond Forming F(420):gammagamma-glutamyl Ligase from Archaeoglobus Fulgidus - A Member of a New Family of Non-ribosomal Peptide Synthases.
J.Mol.Biol., 372, 2007
2POD
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Crystal structure of a member of enolase superfamily from Burkholderia pseudomallei K96243
分子名称: Mandelate racemase / muconate lactonizing enzyme, SODIUM ION
著者Patskovsky, Y, Bonanno, J, Sauder, J.M, Gilmore, J.M, Iizuka, M, Ozyurt, S, Wasserman, S.R, Smith, D, Gerlt, J, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
登録日2007-04-26
公開日2007-06-05
最終更新日2021-02-03
実験手法X-RAY DIFFRACTION (2.34 Å)
主引用文献Crystal Structure of a Member of Enolase Superfamily from Burkholderia Pseudomallei.
To be Published
4K7B
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Crystal structure of Extrinsic protein in photosystem II
分子名称: Extrinsic protein in photosystem II, GLYCEROL, SULFATE ION
著者Nagao, R, Suga, M, Niikura, A, Okumura, A, Koua, F.H.M, Suzuki, T, Tomo, T, Enami, I, Shen, J.R.
登録日2013-04-16
公開日2013-09-18
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Crystal Structure of Psb31, a Novel Extrinsic Protein of Photosystem II from a Marine Centric Diatom and Implications for Its Binding and Function
Biochemistry, 52, 2013
3VGE
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Crystal structure of glycosyltrehalose trehalohydrolase (D252S)
分子名称: CITRATE ANION, GLYCEROL, Malto-oligosyltrehalose trehalohydrolase
著者Okazaki, N, Tamada, T, Feese, M.D, Kato, M, Miura, Y, Komeda, T, Kobayashi, K, Kondo, K, Kuroki, R.
登録日2011-08-09
公開日2012-06-20
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Substrate recognition mechanism of a glycosyltrehalose trehalohydrolase from Sulfolobus solfataricus KM1.
Protein Sci., 21, 2012
3AEC
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Crystal structure of porcine heart mitochondrial complex II bound with 2-Iodo-N-(1-methylethyl)-benzamid
分子名称: 2-iodo-N-(1-methylethyl)benzamide, FE2/S2 (INORGANIC) CLUSTER, FE3-S4 CLUSTER, ...
著者Harada, S, Sasaki, T, Shindo, M, Kido, Y, Inaoka, D.K, Omori, J, Osanai, A, Sakamoto, K, Mao, J, Matsuoka, S, Inoue, M, Honma, T, Tanaka, A, Kita, K.
登録日2010-02-04
公開日2011-02-09
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (3.61 Å)
主引用文献Crystal structure of porcine heart mitochondrial complex II bound with 2-Iodo-N-(1-methylethyl)-benzamid
To be Published
3WD9
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Crystal structure of phosphodiesterase 4B in complex with compound 10f
分子名称: 4-[(4-{2-[(2,2-dimethylpropyl)amino]-2-oxoethyl}phenyl)amino]-2-phenylpyrimidine-5-carboxamide, CALCIUM ION, ZINC ION, ...
著者Takahashi, M, Hanzawa, H.
登録日2013-06-11
公開日2013-10-23
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Synthesis and biological evaluation of 5-carbamoyl-2-phenylpyrimidine derivatives as novel and potent PDE4 inhibitors
Bioorg.Med.Chem., 21, 2013
3WDS
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Crystal structure of 3-quinuclidinone reductase from Agrobacterium tumefaciens
分子名称: 1,2-ETHANEDIOL, ACETIC ACID, NADH-dependent quinuclidinone reductase, ...
著者Hou, F, Miyakawa, T, Tanokura, M.
登録日2013-06-22
公開日2014-06-25
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.72 Å)
主引用文献Structural basis for high substrate-binding affinity of 3-quinuclidinone reductase AtQR
To be Published
3AGB
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F218V mutant of the substrate-free form of red chlorophyll catabolite reductase from Arabidopsis thaliana
分子名称: Red chlorophyll catabolite reductase, chloroplastic, SODIUM ION
著者Sugishima, M, Fukuyama, K.
登録日2010-03-30
公開日2010-09-01
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal structures of the substrate-bound forms of red chlorophyll catabolite reductase: implications for site-specific and stereospecific reaction
J.Mol.Biol., 402, 2010
2ND9
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Solution structure of MapZ extracellular domain first subdomain
分子名称: Mid-cell-anchored protein Z
著者Jean, N.L, Manuse, S, Guinot, M, Bougault, C.M, Grangeasse, C, Simorre, J.-P.
登録日2016-05-11
公開日2016-06-29
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Structure-function analysis of the extracellular domain of the pneumococcal cell division site positioning protein MapZ.
Nat Commun, 7, 2016
3ANR
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human DYRK1A/harmine complex
分子名称: 7-METHOXY-1-METHYL-9H-BETA-CARBOLINE, Dual specificity tyrosine-phosphorylation-regulated kinase 1A
著者Nonaka, Y, Hosoya, T, Hagiwara, M, Ito, N.
登録日2010-09-06
公開日2010-11-10
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Development of a novel selective inhibitor of the Down syndrome-related kinase Dyrk1A
Nat Commun, 1, 2010
3AI3
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The crystal structure of L-Sorbose reductase from Gluconobacter frateurii complexed with NADPH and L-sorbose
分子名称: L-sorbose, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, NADPH-sorbose reductase, ...
著者Kubota, K, Nagata, K, Okai, M, Miyazono, K, Tanokura, M.
登録日2010-05-07
公開日2011-02-09
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献The Crystal Structure of l-Sorbose Reductase from Gluconobacter frateurii Complexed with NADPH and l-Sorbose
J.Mol.Biol., 407, 2011
3AOU
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Structure of the Na+ unbound rotor ring modified with N,N f-Dicyclohexylcarbodiimide of the Na+-transporting V-ATPase
分子名称: DICYCLOHEXYLUREA, UNDECYL-MALTOSIDE, V-type sodium ATPase subunit K
著者Mizutani, K, Yamamoto, M, Yamato, I, Kakinuma, Y, Shirouzu, M, Yokoyama, S, Iwata, S, Murata, T.
登録日2010-10-06
公開日2011-08-17
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (3.14 Å)
主引用文献Structure of the rotor ring modified with N,N'-dicyclohexylcarbodiimide of the Na+-transporting vacuolar ATPase.
Proc.Natl.Acad.Sci.USA, 108, 2011
3AI1
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The crystal structure of L-sorbose reductase from Gluconobacter frateurii complexed with NADPH and L-sorbose reveals the structure bases of its catalytic mechanism and high substrate selectivity
分子名称: NADPH-sorbose reductase
著者Kubota, K, Nagata, K, Okai, M, Miyazono, K, Tanokura, M.
登録日2010-05-06
公開日2011-02-09
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.38 Å)
主引用文献The Crystal Structure of l-Sorbose Reductase from Gluconobacter frateurii Complexed with NADPH and l-Sorbose
J.Mol.Biol., 407, 2011
4Q0Q
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Crystal structure of Acinetobacter sp. DL28 L-ribose isomerase in complex with L-ribulose
分子名称: COBALT (II) ION, COBALT HEXAMMINE(III), L-Ribose isomerase, ...
著者Yoshida, H, Yoshihara, A, Teraoka, M, Izumori, K, Kamitori, S.
登録日2014-04-02
公開日2014-05-28
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.93 Å)
主引用文献X-ray structure of a novel L-ribose isomerase acting on a non-natural sugar L-ribose as its ideal substrate.
Febs J., 281, 2014
4Q0U
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Crystal structure of Acinetobacter sp. DL28 L-ribose isomerase mutant E204Q in complex with L-ribose
分子名称: COBALT (II) ION, COBALT HEXAMMINE(III), L-Ribose isomerase, ...
著者Yoshida, H, Yoshihara, A, Teraoka, M, Izumori, K, Kamitori, S.
登録日2014-04-02
公開日2014-05-28
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.98 Å)
主引用文献X-ray structure of a novel L-ribose isomerase acting on a non-natural sugar L-ribose as its ideal substrate.
Febs J., 281, 2014
3WOJ
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Crystal structure of the DAP BII
分子名称: GLYCEROL, ZINC ION, dipeptidyl aminopeptidase BII
著者Sakamoto, Y, Suzuki, Y, Iizuka, I, Tateoka, C, Roppongi, S, Fujimoto, M, Nonaka, T, Ogasawara, W, Tanaka, N.
登録日2013-12-29
公開日2014-09-03
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献S46 peptidases are the first exopeptidases to be members of clan PA
SCI REP, 4, 2014
3B5M
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Crystal structure of conserved uncharacterized protein from Rhodopirellula baltica
分子名称: SULFATE ION, Uncharacterized protein
著者Patskovsky, Y, Bonanno, J.B, Sridhar, V, Rutter, M, Powell, A, Maletic, M, Rodgers, R, Wasserman, S, Smith, D, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
登録日2007-10-26
公開日2007-11-13
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.21 Å)
主引用文献Crystal Structure of Conserved Uncharacterized Protein from Rhodopirellula baltica.
To be Published
6KHI
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Supercomplex for cylic electron transport in cyanobacteria
分子名称: 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE, ...
著者Pan, X, Cao, D, Xie, F, Zhang, X, Li, M.
登録日2019-07-15
公開日2020-02-12
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Structural basis for electron transport mechanism of complex I-like photosynthetic NAD(P)H dehydrogenase.
Nat Commun, 11, 2020
3BA0
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Crystal structure of full-length human MMP-12
分子名称: ACETOHYDROXAMIC ACID, CALCIUM ION, Macrophage metalloelastase, ...
著者Bertini, I, Calderone, V, Fragai, M, Jaiswal, R, Luchinat, C, Melikian, M, Myonas, E, Svergun, D.I.
登録日2007-11-07
公開日2008-07-29
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Evidence of reciprocal reorientation of the catalytic and hemopexin-like domains of full-length MMP-12.
J.Am.Chem.Soc., 130, 2008
4LE6
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Crystal structure of the phosphotriesterase OPHC2 from Pseudomonas pseudoalcaligenes
分子名称: 1,2-ETHANEDIOL, GLYCEROL, Organophosphorus hydrolase, ...
著者Gotthard, G, Hiblot, J, Chabriere, E, Elias, M.
登録日2013-06-25
公開日2013-11-13
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structural and Enzymatic Characterization of the Phosphotriesterase OPHC2 from Pseudomonas pseudoalcaligenes.
Plos One, 8, 2013
3BHK
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Crystal structure of R49K mutant of monomeric sarcosine oxidase crystallized in phosphate as precipitant
分子名称: CHLORIDE ION, FLAVIN-ADENINE DINUCLEOTIDE, GLYCEROL, ...
著者Hassan-Abdallah, A, Zhao, G, Chen, Z, Mathews, F.S, Jorns, M.S.
登録日2007-11-28
公開日2008-02-26
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.71 Å)
主引用文献Arginine 49 is a bifunctional residue important in catalysis and biosynthesis of monomeric sarcosine oxidase: a context-sensitive model for the electrostatic impact of arginine to lysine mutations.
Biochemistry, 47, 2008
3BH9
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Crystal Structure of RTY Phosphopeptide Bound to Human Class I MHC HLA-A2
分子名称: 1,2-ETHANEDIOL, Beta-2-microglobulin, HLA class I histocompatibility antigen, ...
著者Mohammed, F, Cobbold, M, Zarling, A.L, Salim, M, Barrett-Wilt, G.A, Shabanowitz, J, Hunt, D.F, Engelhard, V.H, Willcox, B.E.
登録日2007-11-28
公開日2008-10-21
最終更新日2017-10-11
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Phosphorylation-dependent interaction between antigenic peptides and MHC class I: a molecular basis for the presentation of transformed self
Nat.Immunol., 9, 2008
3BHP
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Crystal structure of UPF0291 protein ynzC from Bacillus subtilis at resolution 2.0 A. Northeast Structural Genomics Consortium target SR384
分子名称: UPF0291 protein ynzC
著者Kuzin, A.P, Su, M, Seetharaman, J, Janjua, H, Cunningham, K, Maglaqui, M, Owens, L.A, Zhao, L, Xiao, R, Baran, M.C, Acton, T.B, Rost, B, Montelione, G.T, Hunt, J.F, Tong, L, Northeast Structural Genomics Consortium (NESG)
登録日2007-11-28
公開日2007-12-11
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.01 Å)
主引用文献Crystal structure of the UPF0291 protein ynzC from Bacillus subtilis at the resolution 2.0 A.
To be Published
3B42
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Periplasmic sensor domain of chemotaxis protein GSU0935
分子名称: Methyl-accepting chemotaxis protein, putative, PROTOPORPHYRIN IX CONTAINING FE
著者Pokkuluri, P.R, Schiffer, M.
登録日2007-10-23
公開日2008-04-08
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structures and solution properties of two novel periplasmic sensor domains with c-type heme from chemotaxis proteins of Geobacter sulfurreducens: implications for signal transduction.
J.Mol.Biol., 377, 2008
3W1D
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Structure of a pressure sensitive YFP variant YFP-G3
分子名称: Green Fluorescent protein
著者Imada, K, Yoshizawa, K, Kinoshita, M, Watanabe, T.M.
登録日2012-11-14
公開日2013-10-02
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Glycine insertion makes yellow fluorescent protein sensitive to hydrostatic pressure.
Plos One, 8, 2013

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