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PDB: 52259 results

2W23
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BU of 2w23 by Molmil
Structure of mutant W169Y of Pleurotus eryngii versatile peroxidase (VP)
Descriptor: CALCIUM ION, GLYCEROL, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Ruiz-Duenas, F.J, Pogni, R, Morales, M, Giansanti, S, Mate, M.J, Romero, A, Martinez, M.J, Basosi, R, Martinez, A.T.
Deposit date:2008-10-23
Release date:2009-01-20
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:Protein Radicals in Fungal Versatile Peroxidase: Catalytic Tryptophan Radical in Both Compound I and Compound II and Studies on W164Y, W164H, and W164S Variants.
J.Biol.Chem., 284, 2009
5AX7
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BU of 5ax7 by Molmil
yeast pyruvyltransferase Pvg1p
Descriptor: Pyruvyl transferase 1, ZINC ION
Authors:Kanekiyo, M, Yoritsune, K, Yoshinaga, S, Higuchi, Y, Takegawa, K, Kakuta, Y.
Deposit date:2015-07-16
Release date:2016-06-08
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.46 Å)
Cite:A rationally engineered yeast pyruvyltransferase Pvg1p introduces sialylation-like properties in neo-human-type complex oligosaccharide
Sci Rep, 6, 2016
2W2P
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BU of 2w2p by Molmil
PCSK9-deltaC D374A mutant bound to WT EGF-A of LDLR
Descriptor: CALCIUM ION, LOW-DENSITY LIPOPROTEIN RECEPTOR, PROPROTEIN CONVERTASE SUBTILISIN/KEXIN TYPE 9
Authors:Bottomley, M.J, Cirillo, A, Orsatti, L, Ruggeri, L, Fisher, T.S, Santoro, J.C, Cummings, R.T, Cubbon, R.M, Lo Surdo, P, Calzetta, A, Noto, A, Baysarowich, J, Mattu, M, Talamo, F, De Francesco, R, Sparrow, C.P, Sitlani, A, Carfi, A.
Deposit date:2008-11-03
Release date:2008-11-18
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.62 Å)
Cite:Structural and Biochemical Characterization of the Wild Type Pcsk9/Egf-Ab Complex and Natural Fh Mutants.
J.Biol.Chem., 284, 2009
5CSP
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BU of 5csp by Molmil
Crystal Structure of CK2alpha with Compound 5 bound
Descriptor: 2-hydroxy-5-methylbenzoic acid, ACETATE ION, Casein kinase II subunit alpha
Authors:Brear, P, De Fusco, C, Georgiou, K.H, Spring, D, Hyvonen, M.
Deposit date:2015-07-23
Release date:2016-07-27
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Specific inhibition of CK2 alpha from an anchor outside the active site.
Chem Sci, 7, 2016
2AS8
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BU of 2as8 by Molmil
Crystal structure of mature and fully active Der p 1 allergen
Descriptor: MAGNESIUM ION, Major mite fecal allergen Der p 1
Authors:de Halleux, S, Stura, E, VanderElst, L, Carlier, V, Jacquemin, M, Saint-Remy, J.-M.
Deposit date:2005-08-23
Release date:2005-12-06
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Three-dimensional structure and IgE-binding properties of mature fully active Der p 1, a clinically relevant major allergen
J.Allergy Clin.Immunol., 117, 2006
5CYI
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BU of 5cyi by Molmil
CDK2/Cyclin A covalent complex with 6-(cyclohexylmethoxy)-N-(4-(vinylsulfonyl)phenyl)-9H-purin-2-amine (NU6300)
Descriptor: 6-(cyclohexylmethoxy)-N-[4-(ethylsulfonyl)phenyl]-9H-purin-2-amine, Cyclin-A2, Cyclin-dependent kinase 2
Authors:Anscombe, E, Meschini, E, Vidal, R.M, Martin, M.P, Staunton, D, Geitmann, M, Danielson, U.H, Stanley, W.A, Wang, L.Z, Reuillon, T, Golding, B.T, Cano, C, Newell, D.R, Noble, M.E.M, Wedge, S.R, Endicott, J.A, Griffin, R.J.
Deposit date:2015-07-30
Release date:2015-09-16
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Identification and Characterization of an Irreversible Inhibitor of CDK2.
Chem.Biol., 22, 2015
4IKO
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BU of 4iko by Molmil
Structure of Peptidyl- tRNA Hydrolase from Acinetobacter baumannii at 1.90 A resolution
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, DI(HYDROXYETHYL)ETHER, ...
Authors:Yamini, S, Kaushik, S, Sinha, M, Kaur, P, Sharma, S, Singh, T.P.
Deposit date:2012-12-27
Release date:2013-01-30
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:The Mode of Inhibitor Binding to Peptidyl-tRNA Hydrolase: Binding Studies and Structure Determination of Unbound and Bound Peptidyl-tRNA Hydrolase from Acinetobacter baumannii
Plos One, 8, 2013
2VZ5
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BU of 2vz5 by Molmil
Structure of the PDZ domain of Tax1 (human T-cell leukemia virus type I) binding protein 3
Descriptor: CHLORIDE ION, IMIDAZOLE, TAX1-BINDING PROTEIN 3, ...
Authors:Murray, J.W, Shafqat, N, Yue, W, Pilka, E, Johannsson, C, Salah, E, Cooper, C, Elkins, J.M, Pike, A.C, Roos, A, Filippakopoulos, P, von Delft, F, Wickstroem, M, Bountra, C, Edwards, A.M, Arrowsmith, C.H, Oppermann, U.
Deposit date:2008-07-30
Release date:2008-08-12
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.738 Å)
Cite:The Structure of the Pdz Domain of Tax1BP
To be Published
2AW5
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BU of 2aw5 by Molmil
Crystal structure of a human malic enzyme
Descriptor: NADP-dependent malic enzyme
Authors:Papagrigoriou, E, Berridge, G, Smee, C, Bray, J, Arrowsmith, C, Edwards, A, Weigelt, J, Sundstrom, M, Oppermann, U, Gileadi, O, von Delft, F, Structural Genomics Consortium (SGC)
Deposit date:2005-08-31
Release date:2005-09-20
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of a human malic enzyme
To be published
2W0V
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BU of 2w0v by Molmil
Crystal structure of Glmu from Haemophilus influenzae in complex with quinazoline inhibitor 1
Descriptor: 6-(CYCLOPROP-2-EN-1-YLMETHOXY)-2-[6-(CYCLOPROPYLMETHYL)-5-OXO-3,4,5,6-TETRAHYDRO-2,6-NAPHTHYRIDIN-2(1H)-YL]-7-METHOXYQUINAZOLIN-4(3H)-ONE, GLUCOSAMINE-1-PHOSPHATE N-ACETYLTRANSFERASE, SULFATE ION, ...
Authors:Mochalkin, I, Melnick, M.
Deposit date:2008-10-10
Release date:2009-11-17
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:Discovery and Initial Sar of Quinazoline Inhibitors of Glmu from Haemophilus Influenzae
To be Published
5CXB
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BU of 5cxb by Molmil
Structure of Ytm1 bound to the C-terminal domain of Erb1 in P21 21 2 space group
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, GLYCEROL, ...
Authors:Wegrecki, M, Bravo, J.
Deposit date:2015-07-28
Release date:2015-11-04
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:The structure of Erb1-Ytm1 complex reveals the functional importance of a high-affinity binding between two beta-propellers during the assembly of large ribosomal subunits in eukaryotes.
Nucleic Acids Res., 43, 2015
3N28
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BU of 3n28 by Molmil
Crystal structure of probable phosphoserine phosphatase from vibrio cholerae, unliganded form
Descriptor: Phosphoserine phosphatase, SULFATE ION
Authors:Patskovsky, Y, Ramagopal, U, Toro, R, Rutter, M, Miller, S, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2010-05-17
Release date:2010-07-14
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal Structure of Phosphoserine Phosphatase from Vibrio Cholerae
To be Published
2AXO
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BU of 2axo by Molmil
X-Ray Crystal Structure of Protein AGR_C_4864 from Agrobacterium tumefaciens. Northeast Structural Genomics Consortium Target AtR35.
Descriptor: hypothetical protein Atu2684
Authors:Forouhar, F, Abashidze, M, Benach, J, Xiao, R, Janjua, H, Conover, K, Acton, T.B, Montelione, G.T, Tong, L, Hunt, J.F, Northeast Structural Genomics Consortium (NESG)
Deposit date:2005-09-05
Release date:2005-09-13
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal Structure of the Hypothetical Protein AGR_C_4864 from Agrobacterium tumefaciens, NESG target AtR35
To be Published
2W16
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BU of 2w16 by Molmil
Structures of FpvA bound to heterologous pyoverdines
Descriptor: (1S)-1-CARBOXY-5-[(3-CARBOXYPROPANOYL)AMINO]-8,9-DIHYDROXY-1,2,3,4-TETRAHYDROPYRIMIDO[1,2-A]QUINOLIN-11-IUM, 3,6,9,12,15-PENTAOXATRICOSAN-1-OL, DSN-ARG-DSN-FHO-LYS-FHO-THR-THR, ...
Authors:Greenwald, J, Nader, M, Celia, H, Gruffaz, C, Meyer, J.-M, Schalk, I.J, Pattus, F.
Deposit date:2008-10-14
Release date:2009-05-12
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.71 Å)
Cite:Fpva Bound to Non-Cognate Pyoverdines: Molecular Basis of Siderophore Recognition by an Iron Transporter.
Mol.Microbiol., 72, 2009
2AYI
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BU of 2ayi by Molmil
Wild-type AmpT from Thermus thermophilus
Descriptor: Aminopeptidase T, ZINC ION
Authors:Odintsov, S.G, Sabala, I, Bourenkov, G, Rybin, V, Bochtler, M.
Deposit date:2005-09-07
Release date:2005-11-08
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (3.7 Å)
Cite:Substrate Access to the Active Sites in Aminopeptidase T, a Representative of a New Metallopeptidase Clan.
J.Mol.Biol., 354, 2005
2Y4L
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BU of 2y4l by Molmil
MANNOSYLGLYCERATE SYNTHASE IN COMPLEX WITH Manganese and GDP
Descriptor: 1,2-ETHANEDIOL, GUANOSINE-5'-DIPHOSPHATE, MALONATE ION, ...
Authors:Nielsen, M.M, Suits, M.D.L, Yang, M, Barry, C.S, Martinez-Fleites, C, Tailford, L.E, Flint, J.E, Davis, B.G, Davies, G.J, Gilbert, H.J.
Deposit date:2011-01-07
Release date:2011-02-02
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Substrate and Metal Ion Promiscuity in Mannosylglycerate Synthase.
J.Biol.Chem., 286, 2011
2Y3E
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BU of 2y3e by Molmil
Traptavidin, apo-form
Descriptor: GLYCEROL, STREPTAVIDIN
Authors:Chivers, C.E, Koner, A.L, Lowe, E.D, Howarth, M.
Deposit date:2010-12-20
Release date:2011-02-16
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.449 Å)
Cite:How the Biotin-Streptavidin Interaction Was Made Even Stronger: Investigation Via Crystallography and a Chimeric Tetramer.
Biochem.J., 435, 2011
2AZM
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BU of 2azm by Molmil
Crystal structure of the MDC1 brct repeat in complex with the histone tail of gamma-H2AX
Descriptor: GAMMA-H2AX HISTONE, Mediator of DNA damage checkpoint protein 1
Authors:Clapperton, J.A, Stucki, M, Mohammad, D, Yaffe, M.B, Jackson, S.P, Smerdon, S.J.
Deposit date:2005-09-12
Release date:2006-01-31
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.41 Å)
Cite:MDC1 Directly Binds Phosphorylated Histone H2AX to Regulate Cellular Responses to DNA Double-Strand Breaks
Cell(Cambridge,Mass.), 123, 2005
2Y61
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BU of 2y61 by Molmil
Crystal structure of Leishmanial E65Q-TIM complexed with S-Glycidol phosphate
Descriptor: GLYCEROL, SN-GLYCEROL-1-PHOSPHATE, SN-GLYCEROL-3-PHOSPHATE, ...
Authors:Venkatesan, R, Alahuhta, M, Pihko, P.M, Wierenga, R.K.
Deposit date:2011-01-19
Release date:2011-12-14
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (0.99 Å)
Cite:High resolution crystal structures of triosephosphate isomerase complexed with its suicide inhibitors: the conformational flexibility of the catalytic glutamate in its closed, liganded active site.
Protein Sci., 20, 2011
3ZI8
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BU of 3zi8 by Molmil
Structure of the R17A mutant of the Ralstonia soleanacerum lectin at 1.5 Angstrom in complex with L-fucose
Descriptor: (4R)-2-METHYLPENTANE-2,4-DIOL, MAGNESIUM ION, PUTATIVE FUCOSE-BINDING LECTIN PROTEIN, ...
Authors:Arnaud, J, Audfray, A, Claudinon, J, Trondle, K, Trosvalet, M, Thomas, A, Varrot, A, Romer, W, Imberty, A.
Deposit date:2013-01-07
Release date:2013-07-31
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Reduction of Lectin Valency Drastically Changes Glycolipid Dynamics in Membranes, But not Surface Avidity.
Acs Chem.Biol., 8, 2013
2XIV
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BU of 2xiv by Molmil
Structure of Rv1477, hypothetical invasion protein of Mycobacterium tuberculosis
Descriptor: GLYCEROL, HYPOTHETICAL INVASION PROTEIN
Authors:Pogenberg, V, Tizzano, B, Wilmanns, M.
Deposit date:2010-07-01
Release date:2010-07-14
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Structure of Rv1477, Hypothetical Invasion Protein of Mycobacterium Tuberculosis
To be Published
2XXI
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BU of 2xxi by Molmil
Crystal structure of 1-((4-(3-(trifluoromethyl)-6,7-dihydropyrano(4,3- c(pyrazol-1(4H)-yl)phenyl)methyl)-2-pyrrolidinone in complex with the ligand binding domain of the Rat GluA2 receptor and glutamate at 1.6A resolution.
Descriptor: 1-({4-[3-(TRIFLUOROMETHYL)-6,7-DIHYDROPYRANO[4,3-C]PYRAZOL-1(4H)-YL]PHENYL}METHYL)-2-PYRROLIDINONE, GLUTAMATE RECEPTOR 2, GLUTAMIC ACID, ...
Authors:Ward, S.E, Harries, M, Aldegheri, L, Austin, N.E, Ballantine, S, Ballini, E, Bradley, D.M, Bax, B.D, Clarke, B.P, Harris, A.J, Harrison, S.A, Melarange, R.A, Mookherjee, C, Mosley, J, DalNegro, G, Oliosi, B, Smith, K.J, Thewlis, K.M, Woollard, P.M, Yusaf, S.P.
Deposit date:2010-11-10
Release date:2011-04-06
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Integration of Lead Optimization with Crystallography for a Membrane-Bound Ion Channel Target: Discovery of a New Class of Ampa Receptor Positive Allosteric Modulators.
J.Med.Chem., 54, 2011
3MY6
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BU of 3my6 by Molmil
Crystal Structure of the complex of type 1 ribosome inactivating protein with 7-methylguanine at 2.65 A resolution
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-amino-7-methyl-1,7-dihydro-6H-purin-6-one, Ribosome-inactivating protein momordin I
Authors:Kushwaha, G.S, Singh, N, Sinha, M, Bhushan, A, Kaur, P, Sharma, S, Singh, T.P.
Deposit date:2010-05-10
Release date:2010-08-04
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Crystal Structure of the complex of type 1 ribosome inactivating protein with 7-methylguanine at 2.65 A resolution
To be Published
2XWD
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BU of 2xwd by Molmil
X-RAY STRUCTURE OF ACID-BETA-GLUCOSIDASE WITH 5N,6O-(N'-(N-OCTYL)IMINO)NOJIRIMYCIN IN THE ACTIVE SITE
Descriptor: (3Z,5S,6R,7S,8R,8aR)-3-(octylimino)hexahydro[1,3]oxazolo[3,4-a]pyridine-5,6,7,8-tetrol, GLUCOSYLCERAMIDASE, SULFATE ION, ...
Authors:Brumshtein, B, Aguilar-Moncayo, M, Benito, J.M, Ortiz Mellet, C, Garcia Fernandez, J.M, Silman, I, Shaaltiel, Y, Sussman, J.L, Futerman, A.H.
Deposit date:2010-11-01
Release date:2011-09-14
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.66 Å)
Cite:Cyclodextrin-Mediated Crystallization of Acid Beta-Glucosidase in Complex with Amphiphilic Bicyclic Nojirimycin Analogues.
Org.Biomol.Chem., 9, 2011
5D5Y
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BU of 5d5y by Molmil
Structure of Chaetomium thermophilum Skn7 coiled-coil domain, crystal form I
Descriptor: Putative transcription factor
Authors:Neudegger, T, Verghese, J, Hayer-Hartl, M, Hartl, F.U, Bracher, A.
Deposit date:2015-08-11
Release date:2015-12-30
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.03 Å)
Cite:Structure of human heat-shock transcription factor 1 in complex with DNA.
Nat.Struct.Mol.Biol., 23, 2016

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