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PDB: 51964 results

4HOD
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BU of 4hod by Molmil
Crystal structure of LeuT-E290S with bound Cl
Descriptor: CHLORIDE ION, LEUCINE, SODIUM ION, ...
Authors:Kantcheva, A.K, Quick, M, Shi, L, Winther, A.M.L, Stolzenberg, S, Weinstein, H, Javitch, J.A, Nissen, P.
Deposit date:2012-10-22
Release date:2013-05-08
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:The chloride binding site of Neurotransmitter Sodium Symporters
Proc.Natl.Acad.Sci.USA, 2013
1J48
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BU of 1j48 by Molmil
Crystal Structure of Apo-C1027
Descriptor: Apoprotein of C1027
Authors:Chen, Y, Li, J, Liu, Y, Bartlam, M, Gao, Y, Jin, L, Tang, H, Shao, Y, Zhen, Y, Rao, Z.
Deposit date:2001-07-30
Release date:2003-06-03
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal Structure of Apo-C1027 and Computer Modeling Analysis of C1027 Chromophore- Protein Complex
To be published
6RX2
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BU of 6rx2 by Molmil
Fragment AZ-005 binding at the p53pT387/14-3-3 sigma interface
Descriptor: 14-3-3 protein sigma, 7-[[(2~{S})-1-azanylpropan-2-yl]amino]-1-benzothiophene-2-carboximidamide, CALCIUM ION, ...
Authors:Leysen, S, Guillory, X, Wolter, M, Genet, S, Somsen, B, Patel, J, Castaldi, P, Ottmann, C.
Deposit date:2019-06-07
Release date:2020-06-17
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.82 Å)
Cite:Fragment-based Differential Targeting of PPI Stabilizer Interfaces.
J.Med.Chem., 63, 2020
3E4N
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BU of 3e4n by Molmil
Carbonmonoxy Sperm Whale Myoglobin at 40 K: Laser off
Descriptor: CARBON MONOXIDE, Myoglobin, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Tomita, A, Sato, T, Ichiyanagi, K, Nozawa, S, Ichikawa, H, Chollet, M, Kawai, F, Park, S.-Y, Koshihara, S, Adachi, S.
Deposit date:2008-08-12
Release date:2009-02-24
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.21 Å)
Cite:Visualizing breathing motion of internal cavities in concert with ligand migration in myoglobin
Proc.Natl.Acad.Sci.USA, 106, 2009
3OPQ
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BU of 3opq by Molmil
Phosphoribosylaminoimidazole carboxylase with fructose-6-phosphate bound to the central channel of the octameric protein structure.
Descriptor: CHLORIDE ION, FORMIC ACID, FRUCTOSE -6-PHOSPHATE, ...
Authors:Filippova, E.V, Wawrzak, Z, Kudritska, M, Edwards, A, Savchenko, A, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2010-09-01
Release date:2010-11-17
Last modified:2017-11-08
Method:X-RAY DIFFRACTION (2 Å)
Cite:Phosphoribosylaminoimidazole carboxylase with fructose-6-phosphate bound to the central channel of the octameric protein structure.
To be Published
4O0J
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BU of 4o0j by Molmil
HIV-1 Integrase Catalytic Core Domain Complexed with Allosteric Inhibitor (2S)-tert-butoxy[4-(4-chlorophenyl)-6-(3,4-dimethylphenyl)-2,5-dimethylpyridin-3-yl]ethanoic acid
Descriptor: (2S)-tert-butoxy[4-(4-chlorophenyl)-6-(3,4-dimethylphenyl)-2,5-dimethylpyridin-3-yl]ethanoic acid, Integrase, SULFATE ION
Authors:Feng, L, Kvaratskhelia, M.
Deposit date:2013-12-13
Release date:2014-07-02
Last modified:2017-11-22
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:A New Class of Multimerization Selective Inhibitors of HIV-1 Integrase.
Plos Pathog., 10, 2014
6RX7
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BU of 6rx7 by Molmil
Structure of the KIV type 2 (KIV-2) domain of lipoprotein (a)
Descriptor: Apolipoprotein(a), GLYCEROL, SULFATE ION
Authors:Santonastaso, A, Maggi, M, Scotti, C.
Deposit date:2019-06-07
Release date:2020-07-08
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.63 Å)
Cite:High resolution structure of human apolipoprotein (a) kringle IV type 2: beyond the lysine binding site.
J.Lipid Res., 61, 2020
3P7S
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BU of 3p7s by Molmil
Radiation damage study of thermolysin - 100K structure D (7.2 MGy)
Descriptor: CALCIUM ION, Thermolysin, ZINC ION
Authors:Juers, D.H, Weik, M.
Deposit date:2010-10-12
Release date:2010-12-08
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Radiation damage study of thermolysin - 100K structure D (7.2 MGy)
To be Published
6I6W
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BU of 6i6w by Molmil
Circular permutant of ribosomal protein S6, adding 6aa to C terminal of P68-69
Descriptor: 30S ribosomal protein S6,30S ribosomal protein S6
Authors:Wang, H, Logan, D.T, Oliveberg, M.
Deposit date:2018-11-15
Release date:2019-11-27
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.49 Å)
Cite:Exposing the distinctive modular behavior of beta-strands and alpha-helices in folded proteins.
Proc.Natl.Acad.Sci.USA, 117, 2020
6RJN
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BU of 6rjn by Molmil
Crystal structure of a Fungal Catalase at 2.3 Angstroms
Descriptor: CHLORIDE ION, Catalase, DI(HYDROXYETHYL)ETHER, ...
Authors:Gomez, S, Navas-Yuste, S, Payne, A.M, Rivera, W, Lopez-Estepa, M, Brangbour, C, Fulla, D, Juanhuix, J, Fernandez, F.J, Vega, M.C.
Deposit date:2019-04-28
Release date:2020-03-04
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.295 Å)
Cite:Peroxisomal catalases from the yeasts Pichia pastoris and Kluyveromyces lactis as models for oxidative damage in higher eukaryotes.
Free Radic. Biol. Med., 141, 2019
6EJ5
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BU of 6ej5 by Molmil
A conserved structural element in the RNA helicase UPF1 regulates its catalytic activity in an isoform-specific manner
Descriptor: Regulator of nonsense transcripts 1
Authors:Gowravaram, M, Bonneau, F, Maciej, V.D, Chakrabarti, S.
Deposit date:2017-09-20
Release date:2018-01-24
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (3.34 Å)
Cite:A conserved structural element in the RNA helicase UPF1 regulates its catalytic activity in an isoform-specific manner.
Nucleic Acids Res., 46, 2018
1J33
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BU of 1j33 by Molmil
Crystal structure of CobT from Thermus thermophilus HB8
Descriptor: CobT
Authors:Kunishima, N, Asada, Y, Miyano, M, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2003-01-17
Release date:2003-02-04
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal Structure of CobT from Thermus thermophilus HB8
To be Published
6I6U
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BU of 6i6u by Molmil
Circular permutant of ribosomal protein S6, adding 9aa to N terminal of P81-82, L75A mutant
Descriptor: 30S ribosomal protein S6,30S ribosomal protein S6
Authors:Wang, H, Logan, D.T, Oliveberg, M.
Deposit date:2018-11-15
Release date:2019-11-27
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.57 Å)
Cite:Exposing the distinctive modular behavior of beta-strands and alpha-helices in folded proteins.
Proc.Natl.Acad.Sci.USA, 117, 2020
1J3T
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BU of 1j3t by Molmil
Solution structure of the second SH3 domain of human intersectin 2 (KIAA1256)
Descriptor: Intersectin 2
Authors:Nameki, N, Koshiba, S, Tochio, N, Kobayashi, N, Inoue, M, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2003-02-13
Release date:2004-06-15
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Solution structure of the second SH3 domain of human intersectin 2 (KIAA1256)
To be Published
4I54
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BU of 4i54 by Molmil
Crystal structure of clade A/E 93TH057 HIV-1 gp120 H375S core in complex with DMJ-II-121
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, HIV-1 glycoprotein, ...
Authors:Le-Khac, M, Hendrickson, W.A.
Deposit date:2012-11-28
Release date:2013-05-29
Last modified:2021-05-26
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structure-Based Design and Synthesis of an HIV-1 Entry Inhibitor Exploiting X-Ray and Thermodynamic Characterization.
ACS Med Chem Lett, 4, 2013
4NEO
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BU of 4neo by Molmil
Structure of BlmI, a type-II acyl-carrier-protein from Streptomyces verticillus involved in bleomycin biosynthesis
Descriptor: 1,2-ETHANEDIOL, 2-(2-METHOXYETHOXY)ETHANOL, Peptide synthetase NRPS type II-PCP
Authors:Cuff, M.E, Bigelow, L, Bearden, J, Babnigg, G, Bruno, C.J.P, Bingman, C.A, Yennamalli, R, Lohman, J, Ma, M, Shen, B, Phillips Jr, G.N, Joachimiak, A, Enzyme Discovery for Natural Product Biosynthesis (NatPro), Midwest Center for Structural Genomics (MCSG)
Deposit date:2013-10-29
Release date:2014-01-29
Last modified:2023-03-22
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:The crystal structure of BlmI as a model for nonribosomal peptide synthetase peptidyl carrier proteins.
Proteins, 82, 2014
6ROJ
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BU of 6roj by Molmil
Cryo-EM structure of the activated Drs2p-Cdc50p
Descriptor: (2R)-1-{[(R)-hydroxy{[(1R,2R,3R,4R,5S,6R)-2,3,5,6-tetrahydroxy-4-(phosphonooxy)cyclohexyl]oxy}phosphoryl]oxy}-3-(octadecanoyloxy)propan-2-yl (5Z,8Z,11Z,14Z)-icosa-5,8,11,14-tetraenoate, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Cell division control protein 50, ...
Authors:Timcenko, M, Lyons, J.A, Januliene, D, Ulstrup, J.J, Dieudonne, T, Montigny, C, Ash, M.R, Karlsen, J.L, Boesen, T, Kuhlbrandt, W, Lenoir, G, Moeller, A, Nissen, P.
Deposit date:2019-05-13
Release date:2019-07-03
Last modified:2020-07-29
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Structure and autoregulation of a P4-ATPase lipid flippase.
Nature, 571, 2019
4NFG
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BU of 4nfg by Molmil
K13R mutant of horse cytochrome c and yeast cytochrome c peroxidase complex
Descriptor: Cytochrome c, Cytochrome c peroxidase, mitochondrial, ...
Authors:Meulenbroek, E.M, Bashir, Q, Ubbink, M, Pannu, N.S.
Deposit date:2013-10-31
Release date:2014-09-24
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.11 Å)
Cite:Engineering specificity in a dynamic protein complex with a single conserved mutation.
Febs J., 281, 2014
6S1R
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BU of 6s1r by Molmil
Structure of fission yeast Mis16 bound to histone H4
Descriptor: Histone H4, Histone acetyltransferase type B subunit 2
Authors:Lefevre, S, Korntner-Vetter, M, Singleton, M.R.
Deposit date:2019-06-19
Release date:2019-08-07
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Subunit interactions and arrangements in the fission yeast Mis16-Mis18-Mis19 complex.
Life Sci Alliance, 2, 2019
3OUZ
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BU of 3ouz by Molmil
Crystal Structure of Biotin Carboxylase-ADP complex from Campylobacter jejuni
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Biotin carboxylase, D-MALATE, ...
Authors:Maltseva, N, Kim, Y, Makowska-Grzyska, M, Mulligan, R, Papazisi, L, Anderson, W.F, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2010-09-15
Release date:2010-10-13
Last modified:2017-11-08
Method:X-RAY DIFFRACTION (1.902 Å)
Cite:Crystal Structure of Biotin Carboxylase-ADP complex from Campylobacter jejuni
TO BE PUBLISHED
1J71
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BU of 1j71 by Molmil
Structure of the extracellular aspartic proteinase from Candida tropicalis yeast.
Descriptor: Aspartic proteinase, ETHANOL, Tetrapeptide Thr-Ile-Thr-Ser
Authors:Symersky, J, Monod, M, Foundling, S.I.
Deposit date:2001-05-15
Release date:2001-05-23
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:High-resolution structure of the extracellular aspartic proteinase from Candida tropicalis yeast.
Biochemistry, 36, 1997
1J7C
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BU of 1j7c by Molmil
STRUCTURE OF THE ANABAENA FERREDOXIN MUTANT E95K
Descriptor: FE2/S2 (INORGANIC) CLUSTER, FERREDOXIN I
Authors:Hurley, J.K, Weber-Main, A.M, Stankovich, M.T, Benning, M.M, Thoden, J.B, Vanhooke, J.L, Holden, H.M, Chae, Y.K, Xia, B, Cheng, H, Markley, J.L, Martinez-Julvez, M, Gomez-Moreno, C, Schmeits, J.L, Tollin, G.
Deposit date:2001-05-16
Release date:2001-05-23
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structure-function relationships in Anabaena ferredoxin: correlations between X-ray crystal structures, reduction potentials, and rate constants of electron transfer to ferredoxin:NADP+ reductase for site-specific ferredoxin mutants.
Biochemistry, 36, 1997
4HTM
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BU of 4htm by Molmil
Mechanism of CREB Recognition and Coactivation by the CREB Regulated Transcriptional Coactivator CRTC2
Descriptor: CREB-regulated transcription coactivator 2, ZINC ION
Authors:Luo, Q, Viste, K, Urday-Zaa, J.C, Kumar, G.S, Tsai, W.-W, Talai, A, Mayo, K, Montminy, M, Radhakrishnan, I.
Deposit date:2012-11-01
Release date:2012-12-05
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2 Å)
Cite:Protein kinase N1, a cell inhibitor of Akt kinase, has a central role in quality control of germinal center formation
Proc.Natl.Acad.Sci.USA, 2012
3E5O
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BU of 3e5o by Molmil
Carbonmonoxy Sperm Whale Myoglobin at 140 K: Laser off
Descriptor: CARBON MONOXIDE, Myoglobin, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Tomita, A, Sato, T, Ichiyanagi, K, Nozawa, S, Ichikawa, H, Chollet, M, Kawai, F, Park, S.-Y, Koshihara, S, Adachi, S.
Deposit date:2008-08-14
Release date:2009-02-24
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.21 Å)
Cite:Visualizing breathing motion of internal cavities in concert with ligand migration in myoglobin.
Proc.Natl.Acad.Sci.USA, 106, 2009
4HU9
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BU of 4hu9 by Molmil
E. coli thioredoxin variant with (4S)-FluoroPro76 as single proline residue
Descriptor: COPPER (II) ION, Thioredoxin-1
Authors:Scharer, M.A, Rubini, M, Capitani, G, Glockshuber, R.
Deposit date:2012-11-02
Release date:2013-05-29
Last modified:2017-09-20
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:(4R)- and (4S)-Fluoroproline in the Conserved cis-Prolyl Peptide Bond of the Thioredoxin Fold: Tertiary Structure Context Dictates Ring Puckering.
Chembiochem, 14, 2013

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