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PDB: 146 件
4UTO
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BU of 4uto by Molmil
Crystal structure of pneumococcal surface antigen PsaA D280N in the Cd-bound, open state
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CADMIUM ION, MANGANESE ABC TRANSPORTER SUBSTRATE-BINDING LIPOPROTEIN
著者Luo, Z, Counago, R.M, Maher, M, Kobe, B.
登録日2014-07-22
公開日2015-03-11
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Dysregulation of transition metal ion homeostasis is the molecular basis for cadmium toxicity in Streptococcus pneumoniae.
Nat Commun, 6, 2015
4UTP
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BU of 4utp by Molmil
Crystal structure of pneumococcal surface antigen PsaA in the Cd- bound, closed state
分子名称: CADMIUM ION, MANGANESE ABC TRANSPORTER SUBSTRATE-BINDING LIPOPROTEIN
著者Luo, Z, Counago, R.M, Maher, M, Kobe, B.
登録日2014-07-22
公開日2014-08-13
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Dysregulation of transition metal ion homeostasis is the molecular basis for cadmium toxicity in Streptococcus pneumoniae.
Nat Commun, 6, 2015
6LI2
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BU of 6li2 by Molmil
Crystal structure of GPR52 ligand free form with rubredoxin fusion
分子名称: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, Chimera of G-protein coupled receptor 52 and Rubredoxin, DI(HYDROXYETHYL)ETHER, ...
著者Luo, Z.P, Lin, X, Xu, F, Han, G.W.
登録日2019-12-10
公開日2020-02-26
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structural basis of ligand recognition and self-activation of orphan GPR52.
Nature, 579, 2020
6LI0
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BU of 6li0 by Molmil
Crystal structure of GPR52 in complex with agonist c17
分子名称: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, CITRATE ANION, Chimera of G-protein coupled receptor 52 and Flavodoxin, ...
著者Luo, Z.P, Lin, X, Xu, F, Han, G.W.
登録日2019-12-10
公開日2020-02-26
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural basis of ligand recognition and self-activation of orphan GPR52.
Nature, 579, 2020
8STB
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BU of 8stb by Molmil
The structure of abxF, an enzyme catalyzing the formation of the chiral spiroketal of an anthrabenzoxocinone antibiotic, (-)-ABX
分子名称: CHLORIDE ION, GLYCEROL, Glyoxalase, ...
著者Luo, Z, Jia, X, Yan, X, Qu, X, Kobe, B.
登録日2023-05-09
公開日2024-05-22
実験手法X-RAY DIFFRACTION (2.22 Å)
主引用文献The crystal structure of abxF, an enzyme catalyzing the formation of the chiral spiroketal of an anthrabenzoxocinone antibiotic, (-)-ABX.
To Be Published
6W0S
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BU of 6w0s by Molmil
Crystal structure of substrate free cytochrome P450 NasF5053 from Streptomyces sp. NRRL F-5053
分子名称: BROMIDE ION, CHLORIDE ION, GLYCEROL, ...
著者Luo, Z, Jia, X, Sun, C, Qu, X, Kobe, B.
登録日2020-03-02
公開日2020-11-11
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Molecular basis of regio- and stereo-specificity in biosynthesis of bacterial heterodimeric diketopiperazines.
Nat Commun, 11, 2020
7SHJ
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BU of 7shj by Molmil
Crystal structure of Acinetobacter baumannii ZnuA in the metal-free state
分子名称: SODIUM ION, Zinc ABC transporter solute-binding protein
著者Luo, Z, McDevitt, C.A, Kobe, B.
登録日2021-10-09
公開日2022-10-12
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (2.13 Å)
主引用文献Structural and biochemical characterization of Acinetobacter baumannii ZnuA.
J.Inorg.Biochem., 231, 2022
6VZB
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BU of 6vzb by Molmil
Crystal structure of cytochrome P450 NasF5053 S284A-V288A mutant variant from Streptomyces sp. NRRL F-5053 in the cyclo-L-Trp-L-Pro-bound state
分子名称: (3S,8aS)-3-(1H-indol-3-ylmethyl)hexahydropyrrolo[1,2-a]pyrazine-1,4-dione, PROTOPORPHYRIN IX CONTAINING FE, SODIUM ION, ...
著者Luo, Z, Jia, X, Sun, C, Qu, X, Kobe, B.
登録日2020-02-28
公開日2020-11-11
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.68 Å)
主引用文献Molecular basis of regio- and stereo-specificity in biosynthesis of bacterial heterodimeric diketopiperazines.
Nat Commun, 11, 2020
5HN2
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Base Pairing and Structure Insights into the 5-Formylcytosine in RNA Duplex
分子名称: RNA (5'-R(*GP*UP*AP*(OFC)P*GP*UP*AP*C)-3'), SODIUM ION
著者Luo, Z.P, Sheng, J.
登録日2016-01-18
公開日2016-04-27
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Base pairing and structural insights into the 5-formylcytosine in RNA duplex.
Nucleic Acids Res., 44, 2016
6VXV
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BU of 6vxv by Molmil
Crystal structure of cyclo-L-Trp-L-Pro-bound cytochrome P450 NasF5053 from Streptomyces sp. NRRL F-5053
分子名称: (3S,8aS)-3-(1H-indol-3-ylmethyl)hexahydropyrrolo[1,2-a]pyrazine-1,4-dione, CALCIUM ION, PROTOPORPHYRIN IX CONTAINING FE, ...
著者Luo, Z, Jia, X, Sun, C, Qu, X, Kobe, B.
登録日2020-02-24
公開日2020-11-11
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Molecular basis of regio- and stereo-specificity in biosynthesis of bacterial heterodimeric diketopiperazines.
Nat Commun, 11, 2020
5HNJ
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BU of 5hnj by Molmil
Base Pairing and Structure Insights into the 5-Formylcytosine in RNA Duplex
分子名称: RNA (5'-R(*GP*UP*AP*(OFC)P*GP*UP*AP*C)-3'), SODIUM ION
著者Luo, Z.P, Sheng, J.
登録日2016-01-18
公開日2016-04-27
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.24 Å)
主引用文献Base pairing and structural insights into the 5-formylcytosine in RNA duplex.
Nucleic Acids Res., 44, 2016
6VZA
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BU of 6vza by Molmil
Crystal structure of cytochrome P450 NasF5053 Q65I-A86G mutant variant from Streptomyces sp. NRRL F-5053 in the cyclo-L-Trp-L-Pro-bound state
分子名称: (3S,8aS)-3-(1H-indol-3-ylmethyl)hexahydropyrrolo[1,2-a]pyrazine-1,4-dione, CALCIUM ION, CHLORIDE ION, ...
著者Luo, Z, Jia, X, Sun, C, Qu, X, Kobe, B.
登録日2020-02-28
公開日2020-11-11
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.47 Å)
主引用文献Molecular basis of regio- and stereo-specificity in biosynthesis of bacterial heterodimeric diketopiperazines.
Nat Commun, 11, 2020
7C7M
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BU of 7c7m by Molmil
The structure of SAM-bound CntL, an aminobutyrate transferase in staphylopine biosysnthesis
分子名称: 1,2-ETHANEDIOL, S-ADENOSYLMETHIONINE, Staphylopine biosynthesis enzyme CntL
著者Luo, Z, Luo, S, Zhou, H.
登録日2020-05-26
公開日2021-04-28
実験手法X-RAY DIFFRACTION (1.81 Å)
主引用文献Structural insights into the ligand recognition and catalysis of the key aminobutanoyltransferase CntL in staphylopine biosynthesis.
Faseb J., 35, 2021
8W9I
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BU of 8w9i by Molmil
Crystal structure of bacterial prolyl-tRNA synthetase in complex with inhibitor PAA-5
分子名称: (2~{S})-~{N}-[3-(4-azanylquinazolin-7-yl)phenyl]sulfonylpyrrolidine-2-carboxamide, 1,2-ETHANEDIOL, MAGNESIUM ION, ...
著者Luo, Z, Zhou, H.
登録日2023-09-05
公開日2024-09-11
実験手法X-RAY DIFFRACTION (2.45 Å)
主引用文献Structure-Guided Fluorine Scanning Accelerates the Discovery of Potent and Selective Inhibitors Against Bacterial Prolyl-tRNA Synthetase
To Be Published
8W8J
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BU of 8w8j by Molmil
Crystal structure of bacterial prolyl-tRNA synthetase in complex with inhibitor PAA-19
分子名称: (2~{S})-~{N}-[3-(4-azanyl-5-fluoranyl-quinazolin-7-yl)phenyl]sulfonylpyrrolidine-2-carboxamide, 1,2-ETHANEDIOL, Proline--tRNA ligase
著者Luo, Z, Zhou, H.
登録日2023-09-03
公開日2024-09-04
実験手法X-RAY DIFFRACTION (1.807 Å)
主引用文献Structure-Guided Fluorine Scanning Accelerates the Discovery of Potent and Selective Inhibitors Against Bacterial Prolyl-tRNA Synthetase
To Be Published
6CSL
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BU of 6csl by Molmil
Pneumococcal PhtD protein 269-339 fragment with bound Zn(II)
分子名称: Histidine triad protein D, ZINC ION
著者Luo, Z, Pederick, V.G, Paton, J.C, McDevitt, C.A, Kobe, B.
登録日2018-03-20
公開日2018-06-13
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.921 Å)
主引用文献Structural characterisation of the HT3 motif of the polyhistidine triad protein D from Streptococcus pneumoniae.
FEBS Lett., 592, 2018
7C9M
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BU of 7c9m by Molmil
The structure of product-bound CntL, an aminobutyrate transferase in staphylopine biosynthesis
分子名称: (2S)-2-azanyl-4-[[(2R)-3-(1H-imidazol-4-yl)-1-oxidanyl-1-oxidanylidene-propan-2-yl]amino]butanoic acid, 5'-DEOXY-5'-METHYLTHIOADENOSINE, D-histidine 2-aminobutanoyltransferase
著者Luo, Z, Zhou, H.
登録日2020-06-06
公開日2021-04-28
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structural insights into the ligand recognition and catalysis of the key aminobutanoyltransferase CntL in staphylopine biosynthesis.
Faseb J., 35, 2021
7C9K
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BU of 7c9k by Molmil
Crystal Structure of E84Q mutant of CntL in complex with SAM
分子名称: CALCIUM ION, D-histidine 2-aminobutanoyltransferase, S-ADENOSYLMETHIONINE
著者Luo, Z, Zhou, H.
登録日2020-06-06
公開日2021-04-28
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.75 Å)
主引用文献Structural insights into the ligand recognition and catalysis of the key aminobutanoyltransferase CntL in staphylopine biosynthesis.
Faseb J., 35, 2021
8H7J
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BU of 8h7j by Molmil
The crystal structure of CD163 SRCR5-9
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Scavenger receptor cysteine-rich type 1 protein M130, ...
著者Luo, Z.P, Li, R, Ma, H.F.
登録日2022-10-20
公開日2023-10-25
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献The crystal structure of CD163 SRCR5-9
To Be Published
5HNQ
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BU of 5hnq by Molmil
Base Pairing and Structure Insights into the 5-Formylcytosine in RNA Duplex
分子名称: 5fC modified RNA
著者Luo, Z, Sheng, J.
登録日2016-01-18
公開日2016-04-27
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Base pairing and structural insights into the 5-formylcytosine in RNA duplex.
Nucleic Acids Res., 44, 2016
8W8L
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BU of 8w8l by Molmil
Crystal structure of bacterial prolyl-tRNA synthetase in complex with inhibitor PAA-38
分子名称: (2~{S})-~{N}-[5-(4-azanyl-8-fluoranyl-quinazolin-7-yl)-2-fluoranyl-phenyl]sulfonylpyrrolidine-2-carboxamide, 1,2-ETHANEDIOL, MAGNESIUM ION, ...
著者Luo, Z, Zhou, H.
登録日2023-09-03
公開日2024-09-04
実験手法X-RAY DIFFRACTION (1.824 Å)
主引用文献Structure-Guided Fluorine Scanning Accelerates the Discovery of Potent and Selective Inhibitors Against Bacterial Prolyl-tRNA Synthetase
To Be Published
8WWQ
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BU of 8wwq by Molmil
geniposidic acid O-methyltransferase complexed with SAH and geniposidic acid
分子名称: 1,2-ETHANEDIOL, Geniposidic acid, MAGNESIUM ION, ...
著者Luo, Z, Li, L, Ma, D, Zhou, H.
登録日2023-10-26
公開日2024-10-30
実験手法X-RAY DIFFRACTION (1.958 Å)
主引用文献Structural insights into the substrate specificity of GAMT and divergence of seco-iridoid and closed-ring iridoid
To Be Published
7F5H
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BU of 7f5h by Molmil
The crystal structure of RBD-Nanobody complex, DL28 (SC4)
分子名称: GLYCEROL, Nanobody DL28, PHOSPHATE ION, ...
著者Luo, Z.P, Li, T, Lai, Y, Zhou, Y, Tan, J, Li, D.
登録日2021-06-22
公開日2022-06-29
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Structural Characterization of a Neutralizing Nanobody With Broad Activity Against SARS-CoV-2 Variants.
Front Microbiol, 13, 2022
7JJ8
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BU of 7jj8 by Molmil
Crystal structure of the Zn(II)-bound ZnuA-like domain of Streptococcus pneumoniae AdcA
分子名称: ZINC ION, Zinc-binding lipoprotein AdcA
著者Luo, Z, More, J.R, Kobe, B, McDevitt, C.A.
登録日2020-07-24
公開日2020-12-23
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.03 Å)
主引用文献A Trap-Door Mechanism for Zinc Acquisition by Streptococcus pneumoniae AdcA.
Mbio, 12, 2021
6N8A
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BU of 6n8a by Molmil
Crystal structure of selenomethionine-containing AcaB from uropathogenic E. coli
分子名称: CHLORIDE ION, transcription regulator AcaB
著者Luo, Z, Hancock, S.J, Schembri, M.A, Kobe, B.
登録日2018-11-28
公開日2020-07-15
最終更新日2021-01-27
実験手法X-RAY DIFFRACTION (3.4011 Å)
主引用文献Comprehensive analysis of IncC plasmid conjugation identifies a crucial role for the transcriptional regulator AcaB.
Nat Microbiol, 5, 2020

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件を2024-10-30に公開中

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