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PDB: 108 results

1GLU
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BU of 1glu by Molmil
CRYSTALLOGRAPHIC ANALYSIS OF THE INTERACTION OF THE GLUCOCORTICOID RECEPTOR WITH DNA
Descriptor: DNA (5'-D(*CP*CP*AP*GP*AP*AP*CP*AP*TP*CP*GP*AP*TP*GP*TP*TP*C P*TP*G)-3'), PROTEIN (GLUCOCORTICOID RECEPTOR), ZINC ION
Authors:Luisi, B.F, Xu, W.X, Otwinowski, Z, Freedman, L.P, Yamamoto, K.R, Sigler, P.B.
Deposit date:1992-08-30
Release date:1994-01-31
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Crystallographic analysis of the interaction of the glucocorticoid receptor with DNA.
Nature, 352, 1991
1R4R
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BU of 1r4r by Molmil
Crystallographic analysis of the interaction of the glucocorticoid receptor with DNA
Descriptor: 5'-D(*CP*TP*GP*AP*GP*AP*AP*CP*AP*TP*CP*AP*TP*GP*TP*TP*CP*TP*G)-3', 5'-D(*TP*CP*AP*GP*AP*AP*CP*AP*TP*GP*AP*TP*GP*TP*TP*CP*TP*CP*A)-3', Glucocorticoid receptor, ...
Authors:Luisi, B.F, Xu, W.X, Otwinowski, Z, Freedman, L.P, Yamamoto, K.R, Sigler, P.B.
Deposit date:2003-10-07
Release date:2003-10-28
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (3 Å)
Cite:Crystallographic Analysis of the Interaction of the Glucocorticoid Receptor with DNA
Nature, 352, 1991
1R4O
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BU of 1r4o by Molmil
Crystallographic analysis of the interaction of the glucocorticoid receptor with DNA
Descriptor: 5'-D(*CP*CP*AP*GP*AP*AP*CP*AP*TP*CP*GP*AP*TP*GP*TP*TP*CP*TP*G)-3', Glucocorticoid receptor, ZINC ION
Authors:Luisi, B.F, Xu, W.X, Otwinowski, Z, Freedman, L.P, Yamamoto, K.R, Sigler, P.B.
Deposit date:2003-10-07
Release date:2003-10-21
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystallographic Analysis of the Interaction of The Glucocorticoid Receptor with DNA
Nature, 352, 1991
5NQB
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BU of 5nqb by Molmil
Rabbit Muscle L-lactate dehydrogenase in complex with malonate
Descriptor: L-lactate dehydrogenase A chain, MALONATE ION
Authors:Luisi, B.F, Olin-Sandoval, V.
Deposit date:2017-04-19
Release date:2017-05-03
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.58 Å)
Cite:The self-inhibitory nature of metabolic networks and its alleviation through compartmentalization.
Nat Commun, 8, 2017
5NQQ
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BU of 5nqq by Molmil
Rabbit Muscle L-lactate dehydrogenase in complex with NADH and oxaloacetate
Descriptor: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, L-lactate dehydrogenase A chain, OXALOACETATE ION, ...
Authors:Luisi, B.F, Olin-Sandoval, V.
Deposit date:2017-04-20
Release date:2017-06-07
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.872 Å)
Cite:The self-inhibitory nature of metabolic networks and its alleviation through compartmentalization.
Nat Commun, 8, 2017
7PCR
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BU of 7pcr by Molmil
Helicobacter pylori RNase J
Descriptor: Ribonuclease J
Authors:Luisi, B.F, Pei, X.Y.
Deposit date:2021-08-03
Release date:2022-05-25
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Acetylation regulates the oligomerization state and activity of RNase J, the Helicobacter pylori major ribonuclease.
Nat Commun, 14, 2023
6HCK
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BU of 6hck by Molmil
The Transcriptional Regulator PrfA from Listeria Monocytogenes in complex with dipeptide Leu-Leu
Descriptor: LEUCINE, Listeriolysin regulatory protein, SODIUM ION
Authors:Grundstrom, C, Oelker, M, Krypotou, E, Scortti, M, Luisi, B.F, Vazquez-Boland, J, Sauer-Eriksson, A.E.
Deposit date:2018-08-15
Release date:2019-02-13
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Control of Bacterial Virulence through the Peptide Signature of the Habitat.
Cell Rep, 26, 2019
4V2S
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BU of 4v2s by Molmil
Crystal structure of Hfq in complex with the sRNA RydC
Descriptor: RNA-BINDING PROTEIN HFQ, RYDC
Authors:Dimastrogiovanni, D, Frohlich, K.S, Bruce, H.A, Bandyra, K.J, Hohensee, S, Vogel, J, Luisi, B.F.
Deposit date:2014-10-14
Release date:2015-01-14
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (3.48 Å)
Cite:Recognition of the small regulatory RNA RydC by the bacterial Hfq protein.
Elife, 3, 2014
4UOT
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BU of 4uot by Molmil
Thermodynamic hyperstability in parametrically designed helical bundles
Descriptor: DESIGNED HELICAL BUNDLE 5H2L
Authors:Oberdorfer, G, Huang, P, Pei, X.Y, Xu, C, Gonen, T, Nannenga, B, DiMaio, D, Rogers, J, Luisi, B.F, Baker, D.
Deposit date:2014-06-09
Release date:2014-11-05
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.69 Å)
Cite:High Thermodynamic Stability of Parametrically Designed Helical Bundles
Science, 346, 2014
4UOS
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BU of 4uos by Molmil
Thermodynamic hyperstability in parametrically designed helical bundles
Descriptor: DESIGNED HELICAL BUNDLE
Authors:Oberdorfer, G, Huang, P, Pei, X.Y, Xu, C, Gonen, T, Nannenga, B, DiMaio, D, Rogers, J, Luisi, B.F, Baker, D.
Deposit date:2014-06-09
Release date:2014-11-05
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.63 Å)
Cite:High Thermodynamic Stability of Parametrically Designed Helical Bundles
Science, 346, 2014
8CGL
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BU of 8cgl by Molmil
Cryo-EM structure of RNase J from Helicobacter pylori
Descriptor: Ribonuclease J
Authors:Lulla, A, Luisi, B.F.
Deposit date:2023-02-05
Release date:2023-12-27
Method:ELECTRON MICROSCOPY (4.1 Å)
Cite:Acetylation regulates the oligomerization state and activity of RNase J, the Helicobacter pylori major ribonuclease.
Nat Commun, 14, 2023
2FYM
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BU of 2fym by Molmil
Crystal structure of E. coli enolase complexed with the minimal binding segment of RNase E.
Descriptor: Enolase, MAGNESIUM ION, Ribonuclease E
Authors:Chandran, V, Luisi, B.F.
Deposit date:2006-02-08
Release date:2006-02-28
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Recognition of Enolase in the Escherichia coli RNA Degradosome
J.Mol.Biol., 358, 2006
1W85
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BU of 1w85 by Molmil
The crystal structure of pyruvate dehydrogenase E1 bound to the peripheral subunit binding domain of E2
Descriptor: DI(HYDROXYETHYL)ETHER, DIHYDROLIPOYLLYSINE-RESIDUE ACETYLTRANSFERASE COMPONENT OF PYRUVATE, MAGNESIUM ION, ...
Authors:Frank, R.A.W, Pratap, J.V, Pei, X.Y, Perham, R.N, Luisi, B.F.
Deposit date:2004-09-16
Release date:2004-11-02
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:A molecular switch and proton wire synchronize the active sites in thiamine enzymes.
Science, 306, 2004
1W88
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BU of 1w88 by Molmil
The crystal structure of pyruvate dehydrogenase E1(D180N,E183Q) bound to the peripheral subunit binding domain of E2
Descriptor: DIHYDROLIPOYLLYSINE-RESIDUE ACETYLTRANSFERASE COMPONENT OF PYRUVATE, MAGNESIUM ION, PYRUVATE DEHYDROGENASE E1 COMPONENT, ...
Authors:Frank, R.A.W, Pratap, J.V, Pei, X.Y, Perham, R.N, Luisi, B.F.
Deposit date:2004-09-16
Release date:2004-11-02
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:A Molecular Switch and Proton-Wire Synchronize the Active Sites in Thiamine-Dependent Enzymes
Science, 306, 2004
8CIB
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BU of 8cib by Molmil
Structural and functional analysis of the Pseudomonas aeruginosa PA1677 protein
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, ACETATE ION, Cysteine hydrolase, ...
Authors:Sonnleitner, E, Brear, P, Luisi, B.F, Blasi, U.
Deposit date:2023-02-09
Release date:2023-12-20
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:Catabolite repression control protein antagonist, a novel player in Pseudomonas aeruginosa carbon catabolite repression control.
Front Microbiol, 14, 2023
2JGD
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BU of 2jgd by Molmil
E. COLI 2-oxoglutarate dehydrogenase (E1o)
Descriptor: 2-OXOGLUTARATE DEHYDROGENASE E1 COMPONENT, ADENOSINE MONOPHOSPHATE
Authors:Frank, R.A.W, Price, A.J, Northrop, F.D, Perham, R.N, Luisi, B.F.
Deposit date:2007-02-12
Release date:2007-02-27
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal Structure of the E1 Component of the Escherichia Coli 2-Oxoglutarate Dehydrogenase Multienzyme Complex.
J.Mol.Biol., 368, 2007
7AU2
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BU of 7au2 by Molmil
Cryo-EM structure of human exostosin-like 3 (EXTL3)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Exostosin-like 3, alpha-D-mannopyranose-(1-3)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
Authors:Wilson, L.F.L, Dendooven, T, Hardwick, S.W, Chirgadze, D.Y, Luisi, B.F, Logan, D.T, Mani, K, Dupree, P.
Deposit date:2020-11-02
Release date:2022-05-18
Last modified:2022-06-15
Method:ELECTRON MICROSCOPY (2.43 Å)
Cite:The structure of EXTL3 helps to explain the different roles of bi-domain exostosins in heparan sulfate synthesis.
Nat Commun, 13, 2022
7AUA
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BU of 7aua by Molmil
Cryo-EM structure of human exostosin-like 3 (EXTL3) in complex with UDP
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Exostosin-like 3, MANGANESE (II) ION, ...
Authors:Wilson, L.F.L, Dendooven, T, Hardwick, S.W, Chirgadze, D.Y, Luisi, B.F, Logan, D.T, Mani, K, Dupree, P.
Deposit date:2020-11-02
Release date:2022-05-18
Last modified:2022-06-15
Method:ELECTRON MICROSCOPY (2.93 Å)
Cite:The structure of EXTL3 helps to explain the different roles of bi-domain exostosins in heparan sulfate synthesis.
Nat Commun, 13, 2022
6G63
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BU of 6g63 by Molmil
RNase E in complex with sRNA RrpA
Descriptor: RNA (5'-R(P*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*UP*UP*UP*UP*UP*UP*UP*UP*UP*UP*U)-3'), Ribonuclease E, URIDINE-5'-MONOPHOSPHATE, ...
Authors:Bandyra, K.B, Luisi, B.F.
Deposit date:2018-03-31
Release date:2018-10-03
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (3.95 Å)
Cite:Substrate Recognition and Autoinhibition in the Central Ribonuclease RNase E.
Mol. Cell, 72, 2018
6GWK
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BU of 6gwk by Molmil
The crystal structure of Hfq from Caulobacter crescentus
Descriptor: RNA-binding protein Hfq
Authors:Santiago-Frangos, A, Frohlich, K.S, Jeliazkov, J.R, Gray, J.R, Luisi, B.F, Woodson, S.A, Hardwick, S.W.
Deposit date:2018-06-25
Release date:2019-05-22
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Caulobacter crescentusHfq structure reveals a conserved mechanism of RNA annealing regulation.
Proc.Natl.Acad.Sci.USA, 116, 2019
4CDI
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BU of 4cdi by Molmil
Crystal structure of AcrB-AcrZ complex
Descriptor: ACRIFLAVINE RESISTANCE PROTEIN B, PREDICTED PROTEIN
Authors:Du, D, James, N, Klimont, E, Luisi, B.F.
Deposit date:2013-10-31
Release date:2014-04-30
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (3.7 Å)
Cite:Structure of the Acrab-Tolc Multidrug Efflux Pump.
Nature, 509, 2014
4C48
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BU of 4c48 by Molmil
Crystal structure of AcrB-AcrZ complex
Descriptor: ACRIFLAVINE RESISTANCE PROTEIN B, DARPIN, DODECYL-BETA-D-MALTOSIDE, ...
Authors:Du, D, James, N, Klimont, E, Luisi, B.F.
Deposit date:2013-09-02
Release date:2014-04-30
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Structure of the AcrAB-TolC multidrug efflux pump.
Nature, 509, 2014
4OXP
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BU of 4oxp by Molmil
X-ray crystal structure of the S1 and 5'-sensor domains of RNase E from Caulobacter crescentus
Descriptor: Ribonuclease E
Authors:Voss, J.E, Luisi, B.F.L, Hardwick, S.W.
Deposit date:2014-02-06
Release date:2014-12-03
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Molecular recognition of RhlB and RNase D in the Caulobacter crescentus RNA degradosome.
Nucleic Acids Res., 42, 2014
8B0I
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BU of 8b0i by Molmil
CryoEM structure of bacterial RapZ.GlmZ complex central to the control of cell envelope biogenesis
Descriptor: GlmZ small regulatory RNA, RNase adapter protein RapZ
Authors:Islam, M.S, Hardwick, H.W, Chirgadze, D.Y, Luisi, B.F.
Deposit date:2022-09-07
Release date:2022-10-05
Last modified:2023-01-25
Method:ELECTRON MICROSCOPY (4.28 Å)
Cite:Structure of a bacterial ribonucleoprotein complex central to the control of cell envelope biogenesis.
Embo J., 42, 2023
8B0J
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BU of 8b0j by Molmil
CryoEM structure of bacterial RNaseE.RapZ.GlmZ complex central to the control of cell envelope biogenesis
Descriptor: GlmZ small RNA, RNase adapter protein RapZ, Ribonuclease E
Authors:Islam, M.S, Hardwick, H.W, Chirgadze, D.Y, Luisi, B.F.
Deposit date:2022-09-07
Release date:2022-10-05
Last modified:2023-01-25
Method:ELECTRON MICROSCOPY (3.99 Å)
Cite:Structure of a bacterial ribonucleoprotein complex central to the control of cell envelope biogenesis.
Embo J., 42, 2023

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