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PDB: 63 results

6ADT
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BU of 6adt by Molmil
Structure of Seneca Valley Virus in neutral condition
Descriptor: VP1, VP2, VP3, ...
Authors:Lou, Z.Y, Cao, L.
Deposit date:2018-08-02
Release date:2019-02-06
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (3.22 Å)
Cite:Seneca Valley virus attachment and uncoating mediated by its receptor anthrax toxin receptor 1
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
7BWD
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BU of 7bwd by Molmil
Structure of Dot1L-H2BK34ub Nucleosome Complex
Descriptor: DNA (146-MER), Histone H2A type 1-B/E, Histone H2B type 1-K, ...
Authors:Lou, Z.Y, Liu, L, Cao, L, Ai, H.S, Sun, Z.X.
Deposit date:2020-04-14
Release date:2021-04-14
Method:ELECTRON MICROSCOPY (4.32 Å)
Cite:Structure of the Dot1L-H2BK34ub Nucleosome Complex Reveals an Unprecedented Crosstalk Activation Mechanism through Nucleosome Shape Distortion
To Be Published
3ULX
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BU of 3ulx by Molmil
Crystal structural of the conserved domain of Rice Stress-responsive NAC1
Descriptor: Stress-induced transcription factor NAC1
Authors:Lou, Z.Y, Chen, Q.F, Wang, Q, Xiong, L.Z.
Deposit date:2011-11-11
Release date:2011-12-28
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:A structural view of the conserved domain of Rice Stress-responsive NAC1
To be Published
3ULZ
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BU of 3ulz by Molmil
Crystal structure of apo BAK1
Descriptor: BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1
Authors:Lou, Z.Y, Yan, L.M, Ma, Y.Y.
Deposit date:2011-11-11
Release date:2012-11-21
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural basis for BAK1 activation
To be Published
3UIM
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BU of 3uim by Molmil
Structural basis for the impact of phosphorylation on plant receptor-like kinase BAK1 activation
Descriptor: BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
Authors:Lou, Z.Y, Yan, L.M, Ma, Y.Y.
Deposit date:2011-11-05
Release date:2012-05-23
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural basis for the impact of phosphorylation on the activation of plant receptor-like kinase BAK1
Cell Res., 22, 2012
3NGM
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BU of 3ngm by Molmil
Crystal structure of lipase from Gibberella zeae
Descriptor: Extracellular lipase
Authors:Lou, Z.Y, Li, M, Sun, Y.N, Liu, Y, Liu, Z, Rao, Z.H.
Deposit date:2010-06-12
Release date:2011-05-25
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal structure of a secreted lipase from Gibberella zeae reveals a novel "double-lock" mechanism
Protein Cell, 1, 2010
6ADM
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BU of 6adm by Molmil
Anthrax Toxin Receptor 1-bound full particles of Seneca Valley Virus in acidic conditions
Descriptor: Anthrax toxin receptor 1, MAGNESIUM ION, VP1, ...
Authors:Lou, Z.Y, Cao, L.
Deposit date:2018-08-01
Release date:2019-02-06
Method:ELECTRON MICROSCOPY (2.84 Å)
Cite:Seneca Valley virus attachment and uncoating mediated by its receptor anthrax toxin receptor 1
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
6ADL
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BU of 6adl by Molmil
Anthrax Toxin Receptor 1-bound spent particles of Seneca Valley Virus in acidic conditions
Descriptor: Anthrax toxin receptor 1, MAGNESIUM ION, VP1, ...
Authors:Lou, Z.Y, Cao, L.
Deposit date:2018-08-01
Release date:2019-12-25
Method:ELECTRON MICROSCOPY (3.08 Å)
Cite:Seneca Valley virus attachment and uncoating mediated by its receptor anthrax toxin receptor 1.
Proc.Natl.Acad.Sci.USA, 115, 2018
6ADR
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BU of 6adr by Molmil
Anthrax Toxin Receptor 1-bound the Seneca Valley Virus in neutral conditions
Descriptor: Anthrax toxin receptor 1, MAGNESIUM ION, VP1, ...
Authors:Lou, Z.Y, Cao, L.
Deposit date:2018-08-02
Release date:2019-02-06
Method:ELECTRON MICROSCOPY (3.38 Å)
Cite:Seneca Valley virus attachment and uncoating mediated by its receptor anthrax toxin receptor 1
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
6ADS
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BU of 6ads by Molmil
Structure of Seneca Valley Virus in acidic conditions
Descriptor: VP1, VP2, VP3, ...
Authors:Lou, Z.Y, Cao, L.
Deposit date:2018-08-02
Release date:2019-02-06
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (2.84 Å)
Cite:Seneca Valley virus attachment and uncoating mediated by its receptor anthrax toxin receptor 1
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
6IHB
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BU of 6ihb by Molmil
Adeno-Associated Virus 2 in complex with AAVR
Descriptor: Capsid protein VP1, Dyslexia-associated protein KIAA0319-like protein
Authors:Lou, Z.Y, Zhang, R.
Deposit date:2018-09-29
Release date:2019-03-20
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (2.84 Å)
Cite:Adeno-associated virus 2 bound to its cellular receptor AAVR.
Nat Microbiol, 4, 2019
6IH9
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BU of 6ih9 by Molmil
Adeno-Associated Virus 2 at 2.8 ang
Descriptor: Capsid protein VP1
Authors:Lou, Z.Y, Zhang, R.
Deposit date:2018-09-29
Release date:2019-07-03
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Adeno-associated virus 2 bound to its cellular receptor AAVR.
Nat Microbiol, 4, 2019
5HYW
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BU of 5hyw by Molmil
The crystal structure of the D3-ASK1 complex
Descriptor: F-box/LRR-repeat MAX2 homolog, SKP1-like protein 1A
Authors:Yao, R.F, Ming, Z.H, Yan, L.M, Rao, Z.H, Lou, Z.Y, Xie, D.X.
Deposit date:2016-02-02
Release date:2016-08-03
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (3.01 Å)
Cite:DWARF14 is a non-canonical hormone receptor for strigolactone
Nature, 536, 2016
4G3Y
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BU of 4g3y by Molmil
Crystal structure of TNF-alpha in complex with Infliximab Fab fragment
Descriptor: Tumor necrosis factor, infliximab Fab H, infliximab Fab L
Authors:Liang, S.Y, Dai, J.X, Guo, Y.J, Lou, Z.Y.
Deposit date:2012-07-15
Release date:2013-03-27
Last modified:2013-08-07
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural basis for treating tumor necrosis factor alpha (TNFalpha)-associated diseases with the therapeutic antibody infliximab
J.Biol.Chem., 288, 2013
6M5I
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BU of 6m5i by Molmil
Crystal structure of 2019-nCoV nsp7-nsp8c complex
Descriptor: Non-structural protein 7, Non-structural protein 8
Authors:Yan, L.M, Ge, J, Zhao, Y, Lou, Z.Y, Rao, Z.H.
Deposit date:2020-03-10
Release date:2020-06-17
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.496 Å)
Cite:Crystal structure of 2019-nCoV nsp7-nsp8c complex
To Be Published
4R3D
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BU of 4r3d by Molmil
Crystal structure of MERS Coronavirus papain like protease
Descriptor: Non-structural protein 3, ZINC ION
Authors:Kong, L.Y, Wang, Q, Ming, Z.H, Shaw, N, Sun, Y.N, Yan, L.M, Lou, Z.Y, Rao, Z.H.
Deposit date:2014-08-15
Release date:2015-08-19
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.818 Å)
Cite:The Crystal Structures of Middle East Respiratory Syndrome Coronavirus Papain-like Protease and Its Complex with an Inhibitor
To be Published
3WD5
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BU of 3wd5 by Molmil
Crystal structure of TNFalpha in complex with Adalimumab Fab fragment
Descriptor: Adalimumab Heavy Chain, Adalimumab Light Chain, Tumor necrosis factor
Authors:Hu, S, Liang, S.Y, Guo, Y.J, Lou, Z.Y.
Deposit date:2013-06-06
Release date:2013-08-14
Last modified:2015-07-01
Method:X-RAY DIFFRACTION (3.101 Å)
Cite:Comparison of the inhibition mechanisms of adalimumab and infliximab in treating tumor necrosis factor alpha-associated diseases from a molecular view
J.Biol.Chem., 288, 2013
7EGQ
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BU of 7egq by Molmil
Co-transcriptional capping machineries in SARS-CoV-2 RTC: Coupling of N7-methyltransferase and 3'-5' exoribonuclease with polymerase reveals mechanisms for capping and proofreading
Descriptor: Helicase, MAGNESIUM ION, Non-structural protein 10, ...
Authors:Yan, L.M, Yang, Y.X, Li, M.Y, Zhang, Y, Zheng, L.T, Ge, J, Huang, Y.C, Liu, Z.Y, Wang, T, Gao, S, Zhang, R, Huang, Y.Y, Guddat, L.W, Gao, Y, Rao, Z.H, Lou, Z.Y.
Deposit date:2021-03-25
Release date:2021-07-21
Last modified:2024-06-05
Method:ELECTRON MICROSCOPY (3.35 Å)
Cite:Coupling of N7-methyltransferase and 3'-5' exoribonuclease with SARS-CoV-2 polymerase reveals mechanisms for capping and proofreading.
Cell, 184, 2021
7EIZ
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BU of 7eiz by Molmil
Coupling of N7-methyltransferase and 3'-5' exoribonuclease with SARS-CoV-2 polymerase reveals mechanisms for capping and proofreading
Descriptor: Helicase, MAGNESIUM ION, Non-structural protein 10, ...
Authors:Yan, L, Yang, Y.X, Li, M.Y, Zhang, Y, Zheng, L.T, Ge, J, Huang, Y.C, Liu, Z.Y, Wang, T, Gao, S, Zhang, R, Huang, Y.Y, Guddat, L.W, Gao, Y, Rao, Z.H, Lou, Z.Y.
Deposit date:2021-04-01
Release date:2021-09-22
Last modified:2023-07-26
Method:ELECTRON MICROSCOPY
Cite:Coupling of N7-methyltransferase and 3'-5' exoribonuclease with SARS-CoV-2 polymerase reveals mechanisms for capping and proofreading
Cell, 184, 2021
5GO3
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BU of 5go3 by Molmil
Crystal structure of a di-nucleotide cyclase Vibrio mutant
Descriptor: Cyclic GMP-AMP synthase
Authors:Ming, Z.H, Wang, W, Xie, Y.C, Chen, Y.C, Yan, L.M, Lou, Z.Y.
Deposit date:2016-07-26
Release date:2016-11-02
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of a di-nucleotide cyclase Vibrio mutant
To Be Published
7BQ7
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BU of 7bq7 by Molmil
Crystal structure of 2019-nCoV nsp16-nsp10 complex
Descriptor: 2'-O-methyltransferase, Non-structural protein 10, S-ADENOSYLMETHIONINE, ...
Authors:Yan, L.M, Huang, Y.C, Lou, Z.Y, Rao, Z.H.
Deposit date:2020-03-24
Release date:2020-06-17
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.37 Å)
Cite:Crystal structure of 2019-nCoV nsp16-nsp10 complex
To Be Published
3WLW
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BU of 3wlw by Molmil
Molecular Architecture of the ErbB2 Extracellular Domain Homodimer
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Antibody H Chain, ...
Authors:Hu, S, Lou, Z.Y, Guo, Y.J.
Deposit date:2013-11-15
Release date:2015-05-27
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (3.088 Å)
Cite:Molecular architecture of the ErbB2 extracellular domain homodimer.
Oncotarget, 6, 2015
3W2D
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BU of 3w2d by Molmil
Crystal Structure of Staphylococcal Eenterotoxin B in complex with a novel neutralization monoclonal antibody Fab fragment
Descriptor: Enterotoxin type B, Monoclonal Antibody 3E2 Fab figment heavy chain, Monoclonal Antibody 3E2 Fab figment light chain, ...
Authors:Liang, S.Y, Hu, S, Dai, J.X, Guo, Y.J, Lou, Z.Y.
Deposit date:2012-11-28
Release date:2013-12-25
Last modified:2014-04-16
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Structural basis for the neutralization and specificity of Staphylococcal enterotoxin B against its MHC Class II binding site.
MAbs, 6, 2014
8GWO
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BU of 8gwo by Molmil
A mechanism for SARS-CoV-2 RNA capping and its inhibition by nucleotide analogue inhibitors
Descriptor: Helicase, Non-structural protein 7, Non-structural protein 8, ...
Authors:Yan, L.M, Huang, Y.C, Ge, J, Liu, Z.Y, Gao, Y, Rao, Z.H, Lou, Z.Y.
Deposit date:2022-09-17
Release date:2022-11-30
Last modified:2024-01-24
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:A mechanism for SARS-CoV-2 RNA capping and its inhibition by nucleotide analog inhibitors.
Cell, 185, 2022
8GWG
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BU of 8gwg by Molmil
A mechanism for SARS-CoV-2 RNA capping and its inhibition by nucleotide analogue inhibitors
Descriptor: GUANOSINE-5'-TRIPHOSPHATE, Helicase, Non-structural protein 7, ...
Authors:Yan, L.M, Huang, Y.C, Ge, J, Liu, Z.Y, Gao, Y, Rao, Z.H, Lou, Z.Y.
Deposit date:2022-09-17
Release date:2022-12-14
Last modified:2024-07-03
Method:ELECTRON MICROSCOPY (3.37 Å)
Cite:A mechanism for SARS-CoV-2 RNA capping and its inhibition by nucleotide analog inhibitors.
Cell, 185, 2022

 

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