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PDB: 666 results

7XV6
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BU of 7xv6 by Molmil
Crystal structure of the Human TR4 DNA-Binding Domain with C-terminal extension (DBD-CTE) Homodimer Bound to DR1 Response Element
Descriptor: DNA (5'-D(*CP*TP*GP*AP*CP*CP*TP*TP*TP*GP*AP*CP*CP*TP*CP*TP*GP*C)-3'), DNA (5'-D(*GP*GP*CP*AP*GP*AP*GP*GP*TP*CP*AP*AP*AP*GP*GP*TP*CP*A)-3'), NR2C2 protein, ...
Authors:Liu, Y, Chen, Z.
Deposit date:2022-05-21
Release date:2022-12-28
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structures of human TR4LBD-JAZF1 and TR4DBD-DNA complexes reveal the molecular basis of transcriptional regulation.
Nucleic Acids Res., 51, 2023
7XVA
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BU of 7xva by Molmil
Crystal structure of the Human TR4 Ligand Binding Domain in complex with the JAZF1 corepressor fragment
Descriptor: Juxtaposed with another zinc finger protein 1, Nuclear receptor subfamily 2 group C member 2
Authors:Liu, Y, Chen, Z.
Deposit date:2022-05-21
Release date:2022-12-28
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.856 Å)
Cite:Structures of human TR4LBD-JAZF1 and TR4DBD-DNA complexes reveal the molecular basis of transcriptional regulation.
Nucleic Acids Res., 51, 2023
7XV9
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BU of 7xv9 by Molmil
Crystal structure of the Human TR4 DNA-Binding Domain
Descriptor: Nuclear receptor subfamily 2 group C member 2, ZINC ION
Authors:Liu, Y, Chen, Z.
Deposit date:2022-05-21
Release date:2022-12-28
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.599 Å)
Cite:Structures of human TR4LBD-JAZF1 and TR4DBD-DNA complexes reveal the molecular basis of transcriptional regulation.
Nucleic Acids Res., 51, 2023
7XV8
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BU of 7xv8 by Molmil
Crystal structure of the Human TR4 DNA-Binding Domain Homodimer Bound to DR1 Response Element
Descriptor: DNA (5'-D(*CP*TP*GP*AP*CP*CP*TP*TP*TP*GP*AP*CP*CP*TP*CP*TP*GP*C)-3'), DNA (5'-D(*GP*GP*CP*AP*GP*AP*GP*GP*TP*CP*AP*AP*AP*GP*GP*TP*CP*A)-3'), Nuclear receptor subfamily 2 group C member 2, ...
Authors:Liu, Y, Chen, Z.
Deposit date:2022-05-21
Release date:2022-12-28
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3.199 Å)
Cite:Structures of human TR4LBD-JAZF1 and TR4DBD-DNA complexes reveal the molecular basis of transcriptional regulation.
Nucleic Acids Res., 51, 2023
6JHP
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BU of 6jhp by Molmil
Crystal structure of the glycoside hydrolase family 36 alpha-galactosidase from Paecilomyces thermophila
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Alpha-galactosidase
Authors:Liu, Y, Huang, P, Ma, J, Jiang, Z.
Deposit date:2019-02-18
Release date:2020-05-20
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.559 Å)
Cite:Crystal structure and phylogenetic analysis of the glycoside hydrolase family 36 alpha-galactosidase from Paecilomyces thermophila
To be published
7WDL
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BU of 7wdl by Molmil
Fungal immunomodulatory protein FIP-nha
Descriptor: Fungal immunomodulatory protein
Authors:Liu, Y, Bastiaan-Net, S, Zhang, Y, Hoppenbrouwers, T, Xie, Y, Wang, Y, Wei, X, Du, G, Zhang, H, Imam, K.M.S.U, Wichers, H.J, Li, Z.
Deposit date:2021-12-22
Release date:2022-06-29
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.903 Å)
Cite:Linking the thermostability of FIP-nha (Nectria haematococca) to its structural properties.
Int.J.Biol.Macromol., 213, 2022
7VKH
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BU of 7vkh by Molmil
Crystal structure of AF9 YEATS domain in complex with hit 2
Descriptor: GLYCEROL, Protein AF-9, ~{N}-(3-azanyl-4-chloranyl-phenyl)-2-methoxy-ethanamide
Authors:Liu, Y, Ruan, K.
Deposit date:2021-09-30
Release date:2022-10-05
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Fragment-Based Discovery of AF9 YEATS Domain Inhibitors.
Int J Mol Sci, 23, 2022
7VKG
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Crystal structure of AF9 YEATS domain in complex with Compound 10
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, Protein AF-9, ...
Authors:Liu, Y, Ruan, K.
Deposit date:2021-09-29
Release date:2022-10-05
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.83 Å)
Cite:Fragment-Based Discovery of AF9 YEATS Domain Inhibitors.
Int J Mol Sci, 23, 2022
7VZ2
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BU of 7vz2 by Molmil
Crystal structure of chromodomain of Arabidopsis LHP1
Descriptor: Chromo domain-containing protein LHP1, UNKNOWN ATOM OR ION
Authors:Liu, Y, Min, J.
Deposit date:2021-11-15
Release date:2022-02-02
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural basis for the recognition of methylated histone H3 by the Arabidopsis LHP1 chromodomain.
J.Biol.Chem., 298, 2022
7VYW
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BU of 7vyw by Molmil
Crystal structure of the chromodomain of Arabidopsis LHP1 in complex with methylated histone H3K9 peptide
Descriptor: Chromo domain-containing protein LHP1, SULFATE ION, methylated histone H3K9 peptide
Authors:Liu, Y, Zhang, M, Min, J.
Deposit date:2021-11-15
Release date:2022-02-02
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structural basis for the recognition of methylated histone H3 by the Arabidopsis LHP1 chromodomain.
J.Biol.Chem., 298, 2022
7XC5
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BU of 7xc5 by Molmil
Crystal structure of the ANK domain of CLPB
Descriptor: Isoform 2 of Caseinolytic peptidase B protein homolog
Authors:Liu, Y, Wu, D, Lu, G, Gao, N, Lin, J.
Deposit date:2022-03-23
Release date:2023-01-18
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Comprehensive structural characterization of the human AAA+ disaggregase CLPB in the apo- and substrate-bound states reveals a unique mode of action driven by oligomerization.
Plos Biol., 21, 2023
7WDM
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BU of 7wdm by Molmil
Fungal immunomodulatory protein FIP-gmi
Descriptor: Immunomodulatory protein
Authors:Liu, Y, Bastiaan-Net, S, Zhang, Y, Hoppenbrouwers, T, Xie, Y, Wang, Y, Wei, X, Du, G, Zhang, H, Imam, K.M.S.U, Wichers, H.J, Li, Z.
Deposit date:2021-12-22
Release date:2022-12-28
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.123 Å)
Cite:Linking the thermostability of FIP-nha (Nectria haematococca) to its structural properties
To Be Published
7UGA
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BU of 7uga by Molmil
Solution structure of NPSL2
Descriptor: NPSL2 RNA (43-MER)
Authors:Liu, Y, Keane, S.C.
Deposit date:2022-03-24
Release date:2022-04-13
Last modified:2024-05-15
Method:SOLUTION NMR, SOLUTION SCATTERING
Cite:Solution Structure of NPSL2, A Regulatory Element in the oncomiR-1 RNA.
J.Mol.Biol., 434, 2022
7DL5
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BU of 7dl5 by Molmil
Crystal structure of Thermotoga Maritima ferritin mutant at 2.3 Angstrom resolution
Descriptor: FE (III) ION, Ferritin, MAGNESIUM ION
Authors:Liu, Y, Leng, X, Zang, J, Zhao, G.
Deposit date:2020-11-26
Release date:2021-12-01
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:A short helix regulates conversion of dimeric and 24-meric ferritin architectures.
Int.J.Biol.Macromol., 203, 2022
7DZN
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BU of 7dzn by Molmil
Crystal Structure of the cross-restricted T18A TCR and HLAB4201 bound to HIV-1 Gag TL9 peptide
Descriptor: Beta-2-microglobulin, Gag-Pol polyprotein, MHC class I antigen, ...
Authors:Liu, Y, Yin, L.
Deposit date:2021-01-25
Release date:2022-01-26
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.63 Å)
Cite:Cross-reactive TCR with alloreactivity for immunodominant HIV-1 epitope Gag TL9 with enhanced control of viral infection
Biorxiv, 2021
7DZM
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BU of 7dzm by Molmil
Crystal Structure of the cross-restricted T18A TCR and HLAB8101 bound to HIV-1 Gag TL9 peptide
Descriptor: Beta-2-microglobulin, Gag-Pol polyprotein, MHC class I antigen, ...
Authors:Liu, Y, Yin, L.
Deposit date:2021-01-25
Release date:2022-01-26
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Cross-reactive TCR with alloreactivity for immunodominant HIV-1 epitope Gag TL9 with enhanced control of viral infection
Biorxiv, 2021
7FA3
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BU of 7fa3 by Molmil
Selenomethionine-derived structure of Aca1 in Pseudomonas phage JBD30
Descriptor: Aca1
Authors:Liu, Y, Zhang, L, Wu, B, Huang, H.
Deposit date:2021-07-05
Release date:2021-07-21
Last modified:2022-02-02
Method:X-RAY DIFFRACTION (1.847 Å)
Cite:Structural basis for anti-CRISPR repression mediated by bacterial operon proteins Aca1 and Aca2.
J.Biol.Chem., 297, 2021
7XA4
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BU of 7xa4 by Molmil
Thermotoga maritima ferritin variant-Tm-E (S111H) with Zn
Descriptor: Ferritin, ZINC ION
Authors:Liu, Y, Zhao, G.
Deposit date:2022-03-17
Release date:2023-02-15
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.96 Å)
Cite:Directed Self-Assembly of Dimeric Building Blocks into Networklike Protein Origami to Construct Hydrogels.
Acs Nano, 16, 2022
7X9X
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BU of 7x9x by Molmil
Thermotoga Maritima ferritin variant-Tm-E(G40E) with Zn
Descriptor: FE (III) ION, Ferritin, ZINC ION
Authors:Liu, Y, Zhao, G.
Deposit date:2022-03-16
Release date:2023-02-15
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Directed Self-Assembly of Dimeric Building Blocks into Networklike Protein Origami to Construct Hydrogels.
Acs Nano, 16, 2022
7XA2
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BU of 7xa2 by Molmil
Thermotoga maritima ferritin variant-Tm-E(S111H)
Descriptor: FE (III) ION, Ferritin
Authors:Liu, Y, Zhao, G.
Deposit date:2022-03-16
Release date:2023-02-15
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.84 Å)
Cite:Directed Self-Assembly of Dimeric Building Blocks into Networklike Protein Origami to Construct Hydrogels.
Acs Nano, 16, 2022
7W5M
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BU of 7w5m by Molmil
Crystal structure of AtNASP in complex of H3 alpha3 helix peptide
Descriptor: GLYCEROL, H3 alpha3 helix peptide, SULFATE ION, ...
Authors:Liu, Y, Bao, H.
Deposit date:2021-11-30
Release date:2022-05-18
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Structural basis for histone H3 recognition by NASP in Arabidopsis.
J Integr Plant Biol, 64, 2022
5G06
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BU of 5g06 by Molmil
Cryo-EM structure of yeast cytoplasmic exosome
Descriptor: EXOSOME COMPLEX COMPONENT CSL4, EXOSOME COMPLEX COMPONENT MTR3, EXOSOME COMPLEX COMPONENT RRP4, ...
Authors:Liu, J.J, Niu, C.Y, Wu, Y, Tan, D, Wang, Y, Ye, M.D, Liu, Y, Zhao, W.W, Zhou, K, Liu, Q.S, Dai, J.B, Yang, X.R, Dong, M.Q, Huang, N, Wang, H.W.
Deposit date:2016-03-17
Release date:2016-06-15
Last modified:2017-08-02
Method:ELECTRON MICROSCOPY (4.2 Å)
Cite:Cryoem Structure of Yeast Cytoplasmic Exosome Complex.
Cell Res., 26, 2016
1LXT
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BU of 1lxt by Molmil
STRUCTURE OF PHOSPHOTRANSFERASE PHOSPHOGLUCOMUTASE FROM RABBIT
Descriptor: CADMIUM ION, PHOSPHOGLUCOMUTASE (DEPHOSPHO FORM), SULFATE ION
Authors:Ray Junior, W.J, Baranidharan, S, Liu, Y.
Deposit date:1996-07-28
Release date:1997-02-12
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structure of rabbit muscle phosphoglucomutase refined at 2.4 A resolution.
Acta Crystallogr.,Sect.D, 53, 1997
3TI8
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BU of 3ti8 by Molmil
Crystal structure of influenza A virus neuraminidase N5 complexed with laninamivir
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 5-acetamido-2,6-anhydro-4-carbamimidamido-3,4,5-trideoxy-7-O-methyl-D-glycero-D-galacto-non-2-enonic acid, ...
Authors:Vavricka, C.J, Li, Q, Wu, Y, Qi, J, Wang, M, Liu, Y, Gao, F, Liu, J, Feng, E, He, J, Wang, J, Liu, H, Jiang, H, Gao, G.F.
Deposit date:2011-08-20
Release date:2011-11-16
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.601 Å)
Cite:Structural and functional analysis of laninamivir and its octanoate prodrug reveals group specific mechanisms for influenza NA inhibition
Plos Pathog., 7, 2011
3TI4
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BU of 3ti4 by Molmil
Crystal structure of 2009 pandemic H1N1 neuraminidase complexed with laninamivir octanoate
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 5-acetamido-2,6-anhydro-4-carbamimidamido-3,4,5-trideoxy-7-O-methyl-9-O-octanoyl-D-glycero-D-galacto-non-2-enonic acid, ACETATE ION, ...
Authors:Vavricka, C.J, Li, Q, Wu, Y, Qi, J, Wang, M, Liu, Y, Gao, F, Liu, J, Feng, E, He, J, Wang, J, Liu, H, Jiang, H, Gao, G.F.
Deposit date:2011-08-20
Release date:2011-11-16
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.602 Å)
Cite:Structural and functional analysis of laninamivir and its octanoate prodrug reveals group specific mechanisms for influenza NA inhibition
Plos Pathog., 7, 2011

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数据于2024-06-12公开中

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