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PDB: 665 results
2AJH
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BU of 2ajh by Molmil
Crystal structure of the editing domain of E. coli leucyl-tRNA synthetase complexes with methionine
Descriptor: Leucyl-tRNA synthetase, METHIONINE
Authors:Liu, Y, Liao, J, Zhu, B, Wang, E.D, Ding, J.
Deposit date:2005-08-02
Release date:2006-01-24
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structures of the editing domain of Escherichia coli leucyl-tRNA synthetase and its complexes with Met and Ile reveal a lock-and-key mechanism for amino acid discrimination
Biochem.J., 394, 2006
2AJI
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BU of 2aji by Molmil
Crystal structure of the editing domain of E. coli leucyl-tRNA synthetase complexes with isoleucine
Descriptor: ISOLEUCINE, Leucyl-tRNA synthetase
Authors:Liu, Y, Liao, J, Zhu, B, Wang, E.D, Ding, J.
Deposit date:2005-08-02
Release date:2006-01-24
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Crystal structures of the editing domain of Escherichia coli leucyl-tRNA synthetase and its complexes with Met and Ile reveal a lock-and-key mechanism for amino acid discrimination
Biochem.J., 394, 2006
2AZP
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BU of 2azp by Molmil
Crystal Structure of PA1268 Solved by Sulfur SAD
Descriptor: hypothetical protein PA1268
Authors:Liu, Y, Gorodichtchenskaia, E, Skarina, T, Yang, C, Joachimiak, A, Edwards, A, Pai, E.F, Savchenko, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2005-09-12
Release date:2005-12-20
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.13 Å)
Cite:Crystal Structure of PA1268 Solved by Sulfur SAD
To be Published
5F3W
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BU of 5f3w by Molmil
Structure of the ATPrS-Mre11/Rad50-DNA complex
Descriptor: 27-MER DNA, DNA double-strand break repair Rad50 ATPase,DNA double-strand break repair Rad50 ATPase, DNA double-strand break repair protein Mre11, ...
Authors:Liu, Y.
Deposit date:2015-12-03
Release date:2016-03-02
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (3.11 Å)
Cite:ATP-dependent DNA binding, unwinding, and resection by the Mre11/Rad50 complex
Embo J., 35, 2016
2EAW
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BU of 2eaw by Molmil
Human UMP Synthase (C-terminal Domain- Orotidine 5'-Monophosphate Decarboxylase)
Descriptor: SULFATE ION, Uridine 5'-monophosphate synthase
Authors:Liu, Y, Tang, H.L, Pai, E.F.
Deposit date:2007-02-03
Release date:2007-02-13
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.88 Å)
Cite:Human UMP Synthase (C-terminal Domain - Orotidine 5'-Monophosphate Decarboxylase)
TO BE PUBLISHED
3MO7
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BU of 3mo7 by Molmil
Crystal structure of human orotidine 5'-monophosphate decarboxylase covalently modified by 2'-fluoro-6-iodo-UMP
Descriptor: 2'-deoxy-2'-fluorouridine 5'-(dihydrogen phosphate), GLYCEROL, Uridine 5'-monophosphate synthase
Authors:Liu, Y, Kotra, L.P, Pai, E.F.
Deposit date:2010-04-22
Release date:2011-04-06
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Novel interactions of fluorinated nucleotide derivatives targeting orotidine 5'-monophosphate decarboxylase.
J.Med.Chem., 54, 2011
2ESH
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BU of 2esh by Molmil
Crystal Structure of Conserved Protein of Unknown Function TM0937- a Potential Transcriptional Factor
Descriptor: CALCIUM ION, conserved hypothetical protein TM0937
Authors:Liu, Y, Bochkareva, E, Zheng, H, Xu, X, Nocek, B, Lunin, V, Edward, A, Pai, E.F, Joachimiak, A, Savchenko, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2005-10-26
Release date:2005-12-06
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal Structure of Conserved Hypothetical Protein TM0937
To be Published
3MI2
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BU of 3mi2 by Molmil
Crystal structure of human orotidine-5'-monophosphate decarboxylase complexed with pyrazofurin monophosphate
Descriptor: (1S)-1,4-anhydro-1-(5-carbamoyl-4-hydroxy-1H-pyrazol-3-yl)-5-O-phosphono-D-ribitol, Uridine 5'-monophosphate synthase
Authors:Liu, Y, To, T, Kotra, L.P, Pai, E.F.
Deposit date:2010-04-09
Release date:2010-05-26
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Structural determinants for the inhibitory ligands of orotidine-5'-monophosphate decarboxylase.
Bioorg.Med.Chem., 18, 2010
3MW7
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BU of 3mw7 by Molmil
Crystal structure of human orotidine 5'-monophosphate decarboxylase complexed with 5-fluoro-UMP(produced from 5-fluoro-6-amino-UMP)
Descriptor: 5-FLUORO-URIDINE-5'-MONOPHOSPHATE, Uridine 5'-monophosphate synthase
Authors:Liu, Y, Kotra, L.P, Pai, E.F.
Deposit date:2010-05-05
Release date:2011-04-06
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.32 Å)
Cite:Crystal structure of human orotidine 5'-monophosphate decarboxylase complexed with 5-fluoro-UMP(produced from 5-fluoro-6-amino-UMP)
To be Published
2FRH
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BU of 2frh by Molmil
Crystal Structure of Sara, A Transcription Regulator From Staphylococcus Aureus
Descriptor: CALCIUM ION, Staphylococcal accessory regulator A
Authors:Liu, Y, Manna, A.C, Ingavale, S, Cheung, A.L, Zhang, G.
Deposit date:2006-01-19
Release date:2006-01-31
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural and function analyses of the global regulatory protein SarA from Staphylococcus aureus.
Proc.Natl.Acad.Sci.Usa, 103, 2006
2FNP
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BU of 2fnp by Molmil
Crystal structure of SarA
Descriptor: Staphylococcal accessory regulator A
Authors:Liu, Y, Manna, A.C, Pan, C.H, Cheung, A.L, Zhang, G.
Deposit date:2006-01-11
Release date:2006-01-31
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural and function analyses of the global regulatory protein SarA from Staphylococcus aureus.
Proc.Natl.Acad.Sci.Usa, 103, 2006
6ASG
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BU of 6asg by Molmil
Crystal structure of Thermus thermophilus RNA polymerase core enzyme
Descriptor: DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta', ...
Authors:Liu, Y, Lin, W, Ying, R, Ebright, R.H.
Deposit date:2017-08-24
Release date:2018-04-11
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (3.8 Å)
Cite:Structural Basis of Transcription Inhibition by Fidaxomicin (Lipiarmycin A3).
Mol. Cell, 70, 2018
4PLI
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BU of 4pli by Molmil
Structure of the chromodomain of MRG2 in complex with H3K36me3
Descriptor: At1g02740, H3K36me3
Authors:Liu, Y, Huang, Y.
Deposit date:2014-05-18
Release date:2015-07-22
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.651 Å)
Cite:Regulation of arabidopsis flowering by the histone mark readers MRG1/2 via interaction with CONSTANS to modulate FT expression.
Plos Genet., 10, 2014
4PLL
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BU of 4pll by Molmil
Structure of the chromodaomain of MRG2 in complex with H3K36me3
Descriptor: At1g02740, H3K36me3
Authors:Liu, Y, Huang, Y.
Deposit date:2014-05-18
Release date:2015-07-22
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Regulation of arabidopsis flowering by the histone mark readers MRG1/2 via interaction with CONSTANS to modulate FT expression.
Plos Genet., 10, 2014
4RGY
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BU of 4rgy by Molmil
Structural and functional analysis of a low-temperature-active alkaline esterase from South China Sea marine sediment microbial metagenomic library
Descriptor: Esterase
Authors:Liu, Y.
Deposit date:2014-10-01
Release date:2015-09-16
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Structural and functional analysis of a low-temperature-active alkaline esterase from South China Sea marine sediment microbial metagenomic library.
J Ind Microbiol Biotechnol, 42, 2015
3BGJ
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BU of 3bgj by Molmil
Crystal Structure of Human Orotidine 5'-monophosphate Decarboxylase Covalently Modified by 6-iodo-UMP
Descriptor: GLYCEROL, URIDINE-5'-MONOPHOSPHATE, Uridine 5'-monophosphate synthase
Authors:Liu, Y, Tang, H.L, Bello, A.M, Devalla, S, Kotra, L.P, Pai, E.F.
Deposit date:2007-11-26
Release date:2008-11-18
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal Structure of Human Orotidine 5'-monophosphate Decarboxylase Covalently Modified by 6-iodo-UMP
To be Published
3BGG
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BU of 3bgg by Molmil
Crystal structure of Human Orotidine 5'-monophosphate Decarboxylase complexed with BMP
Descriptor: 6-HYDROXYURIDINE-5'-PHOSPHATE, Uridine 5'-monophosphate synthase
Authors:Liu, Y, Tang, H.L, Wang, X.Y, Kotra, L.P, Pai, E.F.
Deposit date:2007-11-26
Release date:2007-12-11
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:Crystal structure of Human Orotidine 5'-monophosphate Decarboxylase complexed with BMP
To be Published
4O6X
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BU of 4o6x by Molmil
Crystal structure of human Ankyrin G death domain
Descriptor: Ankyrin-3
Authors:Liu, Y, Zhang, Y, Wang, J.H.
Deposit date:2013-12-24
Release date:2014-10-29
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.103 Å)
Cite:Crystal structure of human Ankyrin G death domain.
Proteins, 82, 2014
4Q46
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BU of 4q46 by Molmil
The second structure of Influenza B PB2 cap-binding domain complex with GDP
Descriptor: GUANOSINE-5'-DIPHOSPHATE, Polymerase basic protein 2
Authors:Liu, Y, Yang, Y, Zheng, X.
Deposit date:2014-04-13
Release date:2015-02-25
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:The crystal structure of the PB2 cap-binding domain of influenza B virus reveals a novel cap recognition mechanism.
J.Biol.Chem., 290, 2015
3N2M
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BU of 3n2m by Molmil
Crystal structure of Plasmodium falciparum orotidine 5'-monophosphate decarboxylase complexed with 5-fluoro-6-amino-UMP
Descriptor: 1,2-ETHANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 6-amino-5-fluorouridine 5'-(dihydrogen phosphate), ...
Authors:Liu, Y, Kotra, L.P, Pai, E.F.
Deposit date:2010-05-18
Release date:2011-04-06
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of Plasmodium falciparum orotidine 5'-monophosphate decarboxylase complexed with 5-fluoro-6-amino-UMP
To be Published
3N34
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BU of 3n34 by Molmil
Crystal structure of Plasmodium falciparum orotidine 5'-monophosphate decarboxylase complexed with 5-fluoro-6-amino-UMP, produced from 5-fluoro-6-azido-UMP
Descriptor: 1,2-ETHANEDIOL, 6-amino-5-fluorouridine 5'-(dihydrogen phosphate), DI(HYDROXYETHYL)ETHER, ...
Authors:Liu, Y, Kotra, L.P, Pai, E.F.
Deposit date:2010-05-19
Release date:2011-04-06
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Crystal structure of Plasmodium falciparum orotidine 5'-monophosphate decarboxylase complexed with 5-fluoro-6-amino-UMP, produced from 5-fluoro-6-azido-UMP
To be Published
3MWA
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BU of 3mwa by Molmil
Crystal structure of Plasmodium falciparum orotidine 5'-monophosphate decarboxylase covalently modified by 2-prime-fluoro-6-iodo-UMP
Descriptor: 2'-deoxy-2'-fluorouridine 5'-(dihydrogen phosphate), DI(HYDROXYETHYL)ETHER, Orotidine 5'-phosphate decarboxylase, ...
Authors:Liu, Y, Kotra, L.P, Pai, E.F.
Deposit date:2010-05-05
Release date:2011-04-06
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Crystal structure of Plasmodium falciparum orotidine 5'-monophosphate decarboxylase covalently modified by 2-prime-fluoro-6-iodo-UMP
To be Published
3N3M
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BU of 3n3m by Molmil
Crystal structure of Plasmodium falciparum orotidine 5'-monophosphate decarboxylase complexed with 6-amino-UMP
Descriptor: 1,2-ETHANEDIOL, 6-AMINOURIDINE 5'-MONOPHOSPHATE, GLYCEROL, ...
Authors:Liu, Y, Kotra, L.P, Pai, E.F.
Deposit date:2010-05-20
Release date:2011-04-06
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.47 Å)
Cite:Crystal structure of Plasmodium falciparum orotidine 5'-monophosphate decarboxylase complexed with 6-amino-UMP
To be Published
3PST
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BU of 3pst by Molmil
Crystal structure of PUL and PFU(mutate) domain
Descriptor: Protein DOA1
Authors:Liu, Y, Sun, J.
Deposit date:2010-12-02
Release date:2011-12-21
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.999 Å)
Cite:Crystal structure of PUL and PFU(mutate) domain
To be Published
3PSP
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BU of 3psp by Molmil
Crystal structure of PUL and PFU domain
Descriptor: Protein DOA1
Authors:Liu, Y, Sun, J.
Deposit date:2010-12-02
Release date:2011-12-21
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.422 Å)
Cite:Crystal structure of PUL and PFU domain
To be Published

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