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PDB: 469 results
3FDS
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BU of 3fds by Molmil
Structural insight into recruitment of translesion DNA polymerase Dpo4 to sliding clamp PCNA
Descriptor: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, DNA polymerase IV, ...
Authors:Ling, H.
Deposit date:2008-11-26
Release date:2009-01-20
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Structural insight into recruitment of translesion DNA polymerase Dpo4 to sliding clamp PCNA
Mol.Microbiol., 71, 2009
1CZG
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BU of 1czg by Molmil
STRUCTURE OF THE G62T MUTANT OF SHIGA-LIKE TOXIN I B SUBUNIT
Descriptor: SHIGA TOXIN B-CHAIN
Authors:Ling, H, Bast, D, Brunton, J.L, Read, R.J.
Deposit date:1999-09-03
Release date:2000-09-13
Last modified:2021-11-03
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:STRUCTURE OF THE G62T MUTANT OF SHIGA-LIKE TOXIN I B SUBUNIT
To be Published
1CSP
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BU of 1csp by Molmil
CRYSTAL STRUCTURE OF THE BACILLUS SUBTILIS MAJOR COLD SHOCK PROTEIN, CSPB: A UNIVERSAL NUCLEIC-ACID BINDING DOMAIN
Descriptor: COLD SHOCK PROTEIN B(CSPB)
Authors:Schindelin, H, Heinemann, U.
Deposit date:1993-05-12
Release date:1995-05-12
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Universal nucleic acid-binding domain revealed by crystal structure of the B. subtilis major cold-shock protein.
Nature, 364, 1993
1D1I
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BU of 1d1i by Molmil
MUTATED SHIGA-LIKE TOXIN B SUBUNIT (W34A) COMPLEXED WITH RECEPTOR GB3 ANALOGUE
Descriptor: SHIGA TOXIN B-CHAIN, alpha-D-galactopyranose-(1-4)-beta-D-galactopyranose, alpha-D-galactopyranose-(1-4)-beta-D-galactopyranose-(1-4)-beta-D-glucopyranose
Authors:Ling, H, Boodhoo, A, Brunton, J.L, Read, R.J.
Deposit date:1999-09-17
Release date:2000-09-20
Last modified:2021-11-03
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Mutated Shiga-like Toxin B Subunit (W34A) Complexed with Receptor Gb3 Analogue
To be Published
1D1K
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BU of 1d1k by Molmil
MUTATED SHIGA-LIKE TOXIN B SUBUNIT (D17E/W34A) COMPLEXED WITH RECEPTOR GB3 ANALOGUE
Descriptor: SHIGA-LIKE TOXIN I SUBUNIT B, alpha-D-galactopyranose-(1-4)-beta-D-galactopyranose-(1-4)-alpha-D-glucopyranose
Authors:Ling, H, Brunton, J.L, Read, R.J.
Deposit date:1999-09-17
Release date:2000-09-20
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2 Å)
Cite:Mutated Shiga-like toxin B subunit (D17E/W34A) complexed with receptor Gb3 analogue
To be Published
1C4Q
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BU of 1c4q by Molmil
MUTATED SHIGA-LIKE TOXIN B SUBUNIT (F30A/W34A) COMPLEXED WITH RECEPTOR GB3 ANALOGUE
Descriptor: PROTEIN (SHIGA-LIKE TOXIN I SUBUNIT B), alpha-D-galactopyranose-(1-4)-beta-D-galactopyranose-(1-4)-beta-D-glucopyranose
Authors:Ling, H, Brunton, J.L, Read, R.J.
Deposit date:1999-08-31
Release date:2000-09-20
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.52 Å)
Cite:Identification of the Primary Receptor Binding Site of Shiga-Like Toxin B Subunits: Structures of Mutated Shiga-Like Toxin I B-Pentamer with and without Bound Carbohydrate
To be Published
2AGP
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BU of 2agp by Molmil
Fidelity of Dpo4: effect of metal ions, nucleotide selection and pyrophosphorolysis
Descriptor: 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, CALCIUM ION, DNA (5'-D(*GP*GP*GP*GP*GP*AP*AP*GP*GP*AP*TP*TP*(DOC)-3'), ...
Authors:Ling, H, Yang, W.
Deposit date:2005-07-27
Release date:2005-09-06
Last modified:2023-02-08
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Fidelity of Dpo4: effect of metal ions, nucleotide selection and pyrophosphorolysis.
Embo J., 24, 2005
2AGQ
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BU of 2agq by Molmil
Fidelity of Dpo4: effect of metal ions, nucleotide selection and pyrophosphorolysis
Descriptor: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, 5'-D(*GP*GP*CP*TP*AP*CP*AP*GP*GP*AP*CP*TP*(DOC))-3', 5'-D(*TP*CP*AP*TP*GP*AP*GP*TP*CP*CP*TP*GP*TP*AP*GP*CP*C)-3', ...
Authors:Ling, H, Yang, W.
Deposit date:2005-07-27
Release date:2005-09-06
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Fidelity of Dpo4: effect of metal ions, nucleotide selection and pyrophosphorolysis.
Embo J., 24, 2005
2AGO
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BU of 2ago by Molmil
Fidelity of Dpo4: effect of metal ions, nucleotide selection and pyrophosphorolysis
Descriptor: CALCIUM ION, DNA (5'-D(*GP*GP*GP*GP*GP*AP*AP*GP*GP*AP*TP*TP*CP*G)-3'), DNA (5'-D(*TP*TP*TP*TP*GP*AP*AP*TP*CP*CP*TP*TP*CP*CP*CP*CP*C)-3'), ...
Authors:Ling, H, Yang, W.
Deposit date:2005-07-27
Release date:2005-09-06
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Fidelity of Dpo4: effect of metal ions, nucleotide selection and pyrophosphorolysis.
Embo J., 24, 2005
1CSQ
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BU of 1csq by Molmil
CRYSTAL STRUCTURE OF THE BACILLUS SUBTILIS MAJOR COLD SHOCK PROTEIN, CSPB: A UNIVERSAL NUCLEIC-ACID BINDING DOMAIN
Descriptor: COLD SHOCK PROTEIN B(CSPB)
Authors:Schindelin, H, Heinemann, U.
Deposit date:1993-05-12
Release date:1995-05-12
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Universal nucleic acid-binding domain revealed by crystal structure of the B. subtilis major cold-shock protein.
Nature, 364, 1993
1MJC
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BU of 1mjc by Molmil
CRYSTAL STRUCTURE OF CSPA, THE MAJOR COLD SHOCK PROTEIN OF ESCHERICHIA COLI
Descriptor: MAJOR COLD-SHOCK PROTEIN 7.4
Authors:Schindelin, H, Heinemann, U.
Deposit date:1994-03-18
Release date:1994-06-22
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of CspA, the major cold shock protein of Escherichia coli.
Proc.Natl.Acad.Sci.USA, 91, 1994
1CQF
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BU of 1cqf by Molmil
THE COMPLEX OF THE MUTATED SHIGA TOXIN B SUBUNIT AND GB3 TRISACCHARIDE
Descriptor: SHIGA TOXIN B-CHAIN, alpha-D-galactopyranose-(1-4)-beta-D-galactopyranose-(1-4)-beta-D-glucopyranose
Authors:Ling, H, Bast, D, Brunton, J.L, Read, R.J.
Deposit date:1999-08-06
Release date:2000-08-07
Last modified:2021-11-03
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The Complex of the Mutated Shiga Toxin B Subunit and Gb3 Trisaccharide
To be Published
1EKS
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BU of 1eks by Molmil
ASP128ALA VARIANT OF MOAC PROTEIN FROM E. COLI
Descriptor: L(+)-TARTARIC ACID, MOLYBDENUM COFACTOR BIOSYNTHESIS PROTEIN C
Authors:Schindelin, H, Liu, M.T.W, Wuebbens, M.M, Rajagopalan, K.V.
Deposit date:2000-03-09
Release date:2000-09-20
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Insights into molybdenum cofactor deficiency provided by the crystal structure of the molybdenum cofactor biosynthesis protein MoaC.
Structure Fold.Des., 8, 2000
1EKR
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BU of 1ekr by Molmil
MOAC PROTEIN FROM E. COLI
Descriptor: MOLYBDENUM COFACTOR BIOSYNTHESIS PROTEIN C
Authors:Schindelin, H, Liu, M.T.W, Wuebbens, M.M, Rajagopalan, K.V.
Deposit date:2000-03-09
Release date:2000-09-20
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2 Å)
Cite:Insights into molybdenum cofactor deficiency provided by the crystal structure of the molybdenum cofactor biosynthesis protein MoaC.
Structure Fold.Des., 8, 2000
2B5E
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BU of 2b5e by Molmil
Crystal Structure of Yeast Protein Disulfide Isomerase
Descriptor: BARIUM ION, GLYCEROL, Protein disulfide-isomerase
Authors:Schindelin, H, Tian, G.
Deposit date:2005-09-28
Release date:2006-01-24
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:The crystal structure of yeast protein disulfide isomerase suggests cooperativity between its active sites.
Cell(Cambridge,Mass.), 124, 2006
8TMT
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BU of 8tmt by Molmil
Crystal structure of KPC-44 carbapenemase in complex with vaborbactam
Descriptor: 1,2-ETHANEDIOL, GLYCEROL, LITHIUM ION, ...
Authors:Sun, Z, Palzkill, T, Hu, L, Neetu, N, Lin, H, Sankaran, B, Wang, J, Prasad, B.
Deposit date:2023-07-30
Release date:2023-12-06
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Klebsiella pneumoniae carbapenemase variant 44 acquires ceftazidime-avibactam resistance by altering the conformation of active-site loops.
J.Biol.Chem., 300, 2023
8TJM
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BU of 8tjm by Molmil
Crystal structure of KPC-44 carbapenemase
Descriptor: 1,2-ETHANEDIOL, SULFATE ION, beta-lactamase
Authors:Sun, Z, Palzkill, T, Hu, L, Lin, H, Sankaran, B, Wang, J, Prasad, B.
Deposit date:2023-07-23
Release date:2023-12-06
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.28 Å)
Cite:Klebsiella pneumoniae carbapenemase variant 44 acquires ceftazidime-avibactam resistance by altering the conformation of active-site loops.
J.Biol.Chem., 300, 2023
8WQM
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BU of 8wqm by Molmil
Complex structure of AtHPPD with Atovaquone
Descriptor: 2-[trans-4-(4-chlorophenyl)cyclohexyl]-3-hydroxynaphthalene-1,4-dione, 4-hydroxyphenylpyruvate dioxygenase, COBALT (II) ION
Authors:Yang, G.-F, Lin, H.-Y, Dong, J.
Deposit date:2023-10-11
Release date:2024-03-13
Last modified:2024-04-17
Method:X-RAY DIFFRACTION (1.796 Å)
Cite:Complex structure of AtHPPD with Atovaquone
To Be Published
8TN0
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BU of 8tn0 by Molmil
Crystal structure of KPC-44 carbapenemase w/o cryoprotectant
Descriptor: SULFATE ION, beta-lactamase
Authors:Sun, Z, Palzkill, T, Hu, L, Lin, H, Sankaran, B, Wang, J, Prasad, B.
Deposit date:2023-07-31
Release date:2023-12-06
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.31 Å)
Cite:Klebsiella pneumoniae carbapenemase variant 44 acquires ceftazidime-avibactam resistance by altering the conformation of active-site loops.
J.Biol.Chem., 300, 2023
8TMR
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BU of 8tmr by Molmil
Crystal structure of KPC-44 carbapenemase complexed with avibactam
Descriptor: (2S,5R)-1-formyl-5-[(sulfooxy)amino]piperidine-2-carboxamide, 1,2-ETHANEDIOL, PHOSPHATE ION, ...
Authors:Sun, Z, Palzkill, T, Hu, L, Lin, H, Sankaran, B, Wang, J, Prasad, B.
Deposit date:2023-07-30
Release date:2023-12-06
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.37 Å)
Cite:Klebsiella pneumoniae carbapenemase variant 44 acquires ceftazidime-avibactam resistance by altering the conformation of active-site loops.
J.Biol.Chem., 300, 2023
5Z19
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BU of 5z19 by Molmil
The crystal structure of Ruminococcus gnavus beta-glucuronidase in complex with uronic isofagomine
Descriptor: (3S,4R,5R)-4,5-dihydroxypiperidine-3-carboxylic acid, Beta-glucuronidase
Authors:Dashnyam, P, Lin, H.Y, Lin, C.H.
Deposit date:2017-12-25
Release date:2018-12-12
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.503 Å)
Cite:Dissection of the substrate preference and structure of gut microbial beta-glucuronidases identifies the major bacteria causing xenobiotic toxicity
To Be Published
5Z18
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BU of 5z18 by Molmil
The crystal structure of Ruminococcus gnavus beta-glucuronidase
Descriptor: Beta-glucuronidase
Authors:Dashnyam, P, Lin, H.Y, Lin, C.H.
Deposit date:2017-12-25
Release date:2018-12-12
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.495 Å)
Cite:Dissection of the substrate preference and structure of gut microbial beta-glucuronidases identifies the major bacteria causing xenobiotic toxicity
To Be Published
5Z1B
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BU of 5z1b by Molmil
Structure of Bifidobacterium dentium beta-glucuronidase complexed with coumarin-3-O-glucuronide
Descriptor: 3-HYDROXY-2H-CHROMEN-2-ONE, Glycosyl hydrolase family 2, TIM barrel domain protein, ...
Authors:Dashnyam, P, Lin, H.Y, Lin, C.H.
Deposit date:2017-12-25
Release date:2018-12-12
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Dissection of the substrate preference and structure of gut microbial-glucuronidases identifies the major bacteria causing xenobiotic toxicity
To Be Published
5Z1A
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BU of 5z1a by Molmil
The crystal structure of Bacteroides fragilis beta-glucuronidase in complex with uronic isofagomine
Descriptor: (3S,4R,5R)-4,5-dihydroxypiperidine-3-carboxylic acid, Putative beta-galactosidase
Authors:Dashnyam, P, Lin, H.Y, Lin, C.H.
Deposit date:2017-12-25
Release date:2018-12-12
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.859 Å)
Cite:Dissection of the substrate preference and structure of gut microbial-glucuronidases identifies the major bacteria causing xenobiotic toxicity
To Be Published
5YWK
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BU of 5ywk by Molmil
Crystal structure of Arabidopsis thaliana HPPD complexed with Benquitrione-Methyl
Descriptor: 1,5-dimethyl-3-(2-methylphenyl)-6-(2-oxidanyl-6-oxidanylidene-cyclohexen-1-yl)carbonyl-quinazoline-2,4-dione, 4-hydroxyphenylpyruvate dioxygenase, COBALT (II) ION
Authors:Yang, W.C, Lin, H.Y.
Deposit date:2017-11-29
Release date:2019-01-16
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.804 Å)
Cite:Structure-Guided Discovery of Silicon-Containing Subnanomolar Inhibitor of Hydroxyphenylpyruvate Dioxygenase as a Potential Herbicide.
J.Agric.Food Chem., 69, 2021

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