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PDB: 405 results

2NVF
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BU of 2nvf by Molmil
Soluble domain of Rieske Iron-Sulfur protein.
Descriptor: FE2/S2 (INORGANIC) CLUSTER, GLYCEROL, Ubiquinol-cytochrome c reductase iron-sulfur subunit
Authors:Kolling, D, Brunzelle, J, Lhee, S, Crofts, A.R, Nair, S.K.
Deposit date:2006-11-12
Release date:2007-02-06
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Atomic resolution structures of rieske iron-sulfur protein: role of hydrogen bonds in tuning the redox potential of iron-sulfur clusters.
Structure, 15, 2007
2NWF
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BU of 2nwf by Molmil
Soluble domain of Rieske Iron Sulfur Protein
Descriptor: FE2/S2 (INORGANIC) CLUSTER, GLYCEROL, Ubiquinol-cytochrome c reductase iron-sulfur subunit
Authors:Kolling, D, Brunzelle, J.S, Lhee, S, Crofts, A.R, Nair, S.K.
Deposit date:2006-11-14
Release date:2007-04-10
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:Atomic resolution structures of rieske iron-sulfur protein: role of hydrogen bonds in tuning the redox potential of iron-sulfur clusters.
Structure, 15, 2007
2NVG
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BU of 2nvg by Molmil
Soluble domain of Rieske Iron Sulfur protein.
Descriptor: FE2/S2 (INORGANIC) CLUSTER, GLYCEROL, Ubiquinol-cytochrome c reductase iron-sulfur subunit
Authors:Kolling, D, Brunzelle, J, Lhee, S, Crofts, A.R, Nair, S.K.
Deposit date:2006-11-12
Release date:2007-02-06
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Atomic resolution structures of rieske iron-sulfur protein: role of hydrogen bonds in tuning the redox potential of iron-sulfur clusters.
Structure, 15, 2007
2KCR
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BU of 2kcr by Molmil
Solution structure of anntoxin
Descriptor: anntoxin
Authors:Hong, J, You, D, Lai, R, Lin, D.
Deposit date:2008-12-29
Release date:2009-06-16
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Solution structure of anntoxin
To be Published
2JQW
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BU of 2jqw by Molmil
A novel lectin-like peptide from Odorrana grahami
Descriptor: lectin-like peptide
Authors:Li, J, Lin, D, Lai, R.
Deposit date:2007-06-13
Release date:2008-06-17
Last modified:2023-12-20
Method:SOLUTION NMR
Cite:A novel lectin-like peptide from Odorrana grahami
To be Published
2JOM
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BU of 2jom by Molmil
NMR structure of rabbit prion protein mutation I214V
Descriptor: Major prion protein
Authors:Li, J, Lin, D.
Deposit date:2007-03-14
Release date:2008-01-29
Last modified:2023-12-20
Method:SOLUTION NMR
Cite:Solution Structure and Dynamics of the I214V Mutant of the Rabbit Prion Protein.
Plos One, 5, 2010
2KLZ
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BU of 2klz by Molmil
Solution Structure of the Tandem UIM Domain of Ataxin-3 Complexed with Ubiquitin
Descriptor: Ataxin-3
Authors:Zhou, C, Song, A, Lin, D, Hu, H.
Deposit date:2009-07-12
Release date:2010-07-28
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Solution Structure of the Tandem UIM Domain of Ataxin-3 Complexed with Ubiquitin
To be Published
6Y7M
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BU of 6y7m by Molmil
Crystal structure of the complex resulting from the reaction between the SARS-CoV main protease and tert-butyl (1-((S)-3-cyclohexyl-1-(((S)-4-(cyclopropylamino)-3,4-dioxo-1-((S)-2-oxopyrrolidin-3-yl)butan-2-yl)amino)-1-oxopropan-2-yl)-2-oxo-1,2-dihydropyridin-3-yl)carbamate
Descriptor: 3C-like proteinase, DIMETHYL SULFOXIDE, ~{tert}-butyl ~{N}-[1-[(2~{S})-3-cyclohexyl-1-[[(2~{S},3~{R})-4-(cyclopropylamino)-3-oxidanyl-4-oxidanylidene-1-[(3~{R})-2-oxidanylidene-3,4-dihydropyrrol-3-yl]butan-2-yl]amino]-1-oxidanylidene-propan-2-yl]-2-oxidanylidene-pyridin-3-yl]carbamate
Authors:Zhang, L, Lin, D, Hilgenfeld, R.
Deposit date:2020-03-01
Release date:2020-03-18
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of SARS-CoV-2 main protease provides a basis for design of improved alpha-ketoamide inhibitors.
Science, 368, 2020
6ZZR
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BU of 6zzr by Molmil
The Crystal Structure of human LDHA from Biortus.
Descriptor: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, L-lactate dehydrogenase A chain
Authors:Wang, F, Lin, D, Cheng, W, Bao, X, Zhu, B, Shang, H.
Deposit date:2020-08-05
Release date:2020-08-19
Last modified:2024-04-24
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:The Crystal Structure of human LDHA from Biortus
To Be Published
6X9H
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BU of 6x9h by Molmil
Molecular mechanism and structural basis of small-molecule modulation of acid-sensing ion channel 1 (ASIC1)
Descriptor: 2-[4-(3,4-dimethoxyphenoxy)phenyl]-1H-benzimidazole-6-carboximidamide, 2-acetamido-2-deoxy-beta-D-glucopyranose, Acid-sensing ion channel 1, ...
Authors:Liu, Y, Ma, J, DesJarlais, R.L, Hagan, R, Rech, J, Lin, D, Liu, C, Miller, R, Schoellerman, J, Luo, J, Letavic, M, Grasberger, B, Maher, M.
Deposit date:2020-06-02
Release date:2020-12-30
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (3.01 Å)
Cite:Molecular mechanism and structural basis of small-molecule modulation of the gating of acid-sensing ion channel 1.
Commun Biol, 4, 2021
6Y2G
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BU of 6y2g by Molmil
Crystal structure (orthorhombic form) of the complex resulting from the reaction between SARS-CoV-2 (2019-nCoV) main protease and tert-butyl (1-((S)-1-(((S)-4-(benzylamino)-3,4-dioxo-1-((S)-2-oxopyrrolidin-3-yl)butan-2-yl)amino)-3-cyclopropyl-1-oxopropan-2-yl)-2-oxo-1,2-dihydropyridin-3-yl)carbamate (alpha-ketoamide 13b)
Descriptor: 3C-like proteinase nsp5, ~{tert}-butyl ~{N}-[1-[(2~{S})-3-cyclopropyl-1-oxidanylidene-1-[[(2~{S},3~{R})-3-oxidanyl-4-oxidanylidene-1-[(3~{S})-2-oxidanylidenepyrrolidin-3-yl]-4-[(phenylmethyl)amino]butan-2-yl]amino]propan-2-yl]-2-oxidanylidene-pyridin-3-yl]carbamate
Authors:Zhang, L, Lin, D, Sun, X, Hilgenfeld, R.
Deposit date:2020-02-15
Release date:2020-03-04
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of SARS-CoV-2 main protease provides a basis for design of improved alpha-ketoamide inhibitors.
Science, 368, 2020
6Y2F
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BU of 6y2f by Molmil
Crystal structure (monoclinic form) of the complex resulting from the reaction between SARS-CoV-2 (2019-nCoV) main protease and tert-butyl (1-((S)-1-(((S)-4-(benzylamino)-3,4-dioxo-1-((S)-2-oxopyrrolidin-3-yl)butan-2-yl)amino)-3-cyclopropyl-1-oxopropan-2-yl)-2-oxo-1,2-dihydropyridin-3-yl)carbamate (alpha-ketoamide 13b)
Descriptor: 3C-like proteinase, DIMETHYL SULFOXIDE, ~{tert}-butyl ~{N}-[1-[(2~{S})-3-cyclopropyl-1-oxidanylidene-1-[[(2~{S},3~{R})-3-oxidanyl-4-oxidanylidene-1-[(3~{S})-2-oxidanylidenepyrrolidin-3-yl]-4-[(phenylmethyl)amino]butan-2-yl]amino]propan-2-yl]-2-oxidanylidene-pyridin-3-yl]carbamate
Authors:Zhang, L, Lin, D, Sun, X, Hilgenfeld, R.
Deposit date:2020-02-15
Release date:2020-03-04
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Crystal structure of SARS-CoV-2 main protease provides a basis for design of improved alpha-ketoamide inhibitors.
Science, 368, 2020
8OVY
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BU of 8ovy by Molmil
Structure of analogue of superfolded GFP
Descriptor: Green fluorescent protein
Authors:Dunkelmann, D, Fiedler, M, Bellini, D, Alvira, C.P, Chin, J.W.
Deposit date:2023-04-26
Release date:2024-01-10
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.537 Å)
Cite:Adding alpha , alpha-disubstituted and beta-linked monomers to the genetic code of an organism.
Nature, 625, 2024
3E9F
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BU of 3e9f by Molmil
Crystal structure short-form (residue1-113) of Eaf3 chromo domain
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Chromatin modification-related protein EAF3
Authors:Sun, B, Hong, J, Zhang, P, Lin, D, Ding, J.
Deposit date:2008-08-22
Release date:2008-11-04
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Molecular Basis of the Interaction of Saccharomyces cerevisiae Eaf3 Chromo Domain with Methylated H3K36
J.Biol.Chem., 283, 2008
3E9G
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BU of 3e9g by Molmil
Crystal structure long-form (residue1-124) of Eaf3 chromo domain
Descriptor: Chromatin modification-related protein EAF3
Authors:Sun, B, Hong, J, Zhang, P, Lin, D, Ding, J.
Deposit date:2008-08-22
Release date:2008-11-04
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Molecular Basis of the Interaction of Saccharomyces cerevisiae Eaf3 Chromo Domain with Methylated H3K36
J.Biol.Chem., 283, 2008
7C62
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BU of 7c62 by Molmil
The Crystal Structure of Parkinson disease protein 7 (DJ-1) from Biortus
Descriptor: GLYCEROL, Protein/nucleic acid deglycase DJ-1
Authors:Wang, F, Lin, D, Lv, Z, Tan, J.
Deposit date:2020-05-21
Release date:2020-07-08
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.027 Å)
Cite:The Crystal Structure of Parkinson disease protein 7 (DJ-1) from Biortus.
To Be Published
7CMR
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BU of 7cmr by Molmil
The Crystal Structure of human MYST1 from Biortus.
Descriptor: GLYCEROL, Histone acetyltransferase KAT8, ZINC ION
Authors:Wang, F, Lin, D, Lv, Z, Xu, X, Tan, J, Shang, H.
Deposit date:2020-07-28
Release date:2020-08-12
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The Crystal Structure of human MYST1 from Biortus.
To Be Published
7CM2
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BU of 7cm2 by Molmil
The Crystal Structure of human USP7 USP domain from Biortus
Descriptor: GLYCEROL, Ubiquitin carboxyl-terminal hydrolase 7
Authors:Wang, F, Cheng, W, Lv, Z, Lin, D, Zhu, B, Miao, Q, Bao, X, Shang, H.
Deposit date:2020-07-24
Release date:2020-08-05
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:The Crystal Structure of human USP7 USP domain from Biortus.
To Be Published
7CML
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BU of 7cml by Molmil
The Crystal Structure of human JNK2 from Biortus.
Descriptor: Mitogen-activated protein kinase 9
Authors:Wang, F, Lin, D, Cheng, W, Miao, Q, Huang, Y, Shang, H.
Deposit date:2020-07-28
Release date:2020-08-12
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:The Crystal Structure of human JNK2 from Biortus.
To Be Published
7CVP
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BU of 7cvp by Molmil
The Crystal Structure of human PHGDH from Biortus.
Descriptor: D-3-phosphoglycerate dehydrogenase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
Authors:Wang, F, Lv, Z, Cheng, W, Lin, D, Miao, Q, Huang, Y.
Deposit date:2020-08-26
Release date:2020-09-09
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:The Crystal Structure of human PHGDH from Biortus.
To Be Published
7C4I
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BU of 7c4i by Molmil
High resolution structure of BRPF1 Bromo Domain from Biortus
Descriptor: GLYCEROL, POTASSIUM ION, Peregrin
Authors:Wang, F, Lin, D, Lv, Z, Zhu, B.
Deposit date:2020-05-18
Release date:2020-07-08
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.37 Å)
Cite:High resolution structure of BRPF1 Bromo Domain from Biortus
To Be Published
7CA4
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BU of 7ca4 by Molmil
The Crystal Structure of human Bcl-2-like protein 1 from Biortus
Descriptor: Bcl-2-like protein 1, SULFATE ION
Authors:Wang, F, Lv, Z, Lin, D, Huang, Y.
Deposit date:2020-06-08
Release date:2020-07-08
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:The Crystal Structure of human Bcl-2-like protein 1 from Biortus.
To Be Published
7DSF
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BU of 7dsf by Molmil
The Crystal Structure of human SPR from Biortus.
Descriptor: ACETATE ION, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, Sepiapterin reductase, ...
Authors:Wang, F, Lv, Z, Cheng, W, Lin, D, Meng, Q, Zhang, B, Huang, Y.
Deposit date:2020-12-31
Release date:2021-01-13
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:The Crystal Structure of human SPR from Biortus.
To Be Published
7DS7
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BU of 7ds7 by Molmil
The Crystal Structure of Leaf-branch compost cutinase from Biortus.
Descriptor: CITRIC ACID, GLYCEROL, IMIDAZOLE, ...
Authors:Wang, F, Lv, Z, Cheng, W, Lin, D, Chu, F, Xu, X, Tan, J.
Deposit date:2020-12-30
Release date:2021-01-13
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:The Crystal Structure of Leaf-branch compost cutinase from Biortus.
To Be Published
7D2C
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BU of 7d2c by Molmil
The Crystal Structure of human PARP14 from Biortus.
Descriptor: CHLORIDE ION, GLYCEROL, Protein mono-ADP-ribosyltransferase PARP14
Authors:Wang, F, Miao, Q, Lv, Z, Cheng, W, Lin, D, Xu, X, Tan, J.
Deposit date:2020-09-16
Release date:2020-09-30
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.56 Å)
Cite:The Crystal Structure of human PARP14 from Biortus.
To Be Published

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PDB entries from 2024-08-07

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