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PDB: 67 results

1IC0
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BU of 1ic0 by Molmil
RED COPPER PROTEIN NITROSOCYANIN FROM NITROSOMONAS EUROPAEA
Descriptor: COPPER (II) ION, Nitrosocyanin
Authors:Lieberman, R.L, Arciero, D.M, Hooper, A.B, Rosenzweig, A.C.
Deposit date:2001-03-29
Release date:2001-06-06
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of a novel red copper protein from Nitrosomonas europaea.
Biochemistry, 40, 2001
7RTX
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BU of 7rtx by Molmil
Actophorin grown in microgravity
Descriptor: Actophorin
Authors:Lieberman, R.L, Quirk, S.
Deposit date:2021-08-16
Release date:2021-12-22
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Improved resolution crystal structure of Acanthamoeba actophorin reveals structural plasticity not induced by microgravity.
Acta Crystallogr.,Sect.F, 77, 2021
8DAJ
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BU of 8daj by Molmil
Structure and Biochemistry of a Promiscuous Thermophilic Polyhydroxybutyrate Depolymerase from Lihuaxuella thermophilia
Descriptor: 1,2-ETHANEDIOL, Esterase, PHB depolymerase family, ...
Authors:Thomas, G.M, Quirk, S, Huard, D.J.E, Lieberman, R.L.
Deposit date:2022-06-13
Release date:2023-02-15
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Bioplastic degradation by a polyhydroxybutyrate depolymerase from a thermophilic soil bacterium.
Protein Sci., 31, 2022
6ASP
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BU of 6asp by Molmil
Structure of Grp94 with methyl 3-chloro-2-(2-(1-(2-ethoxybenzyl)-1 H-imidazol-2-yl)ethyl)-4,6-dihydroxybenzoate, a Grp94-selective inhibitor and promising therapeutic lead for treating myocilin-associated glaucoma
Descriptor: 3,6,9,12,15,18-HEXAOXAICOSANE-1,20-DIOL, Endoplasmin, GLYCEROL, ...
Authors:Huard, D.J.E, Lieberman, R.L.
Deposit date:2017-08-25
Release date:2018-04-18
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.696 Å)
Cite:Trifunctional High-Throughput Screen Identifies Promising Scaffold To Inhibit Grp94 and Treat Myocilin-Associated Glaucoma.
ACS Chem. Biol., 13, 2018
8DOT
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BU of 8dot by Molmil
Structure of a methane clathrate binding protein
Descriptor: TETRAETHYLENE GLYCOL, methane clathrate binding protein
Authors:Huard, D.J.E, Lieberman, R.L, Glass, J.B.
Deposit date:2022-07-14
Release date:2023-09-13
Method:X-RAY DIFFRACTION (3.05 Å)
Cite:Molecular basis for inhibition of methane clathrate growth by a deep subsurface bacterial protein.
Pnas Nexus, 2, 2023
5HQ3
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BU of 5hq3 by Molmil
Stable, high-expression variant of human acetylcholinesterase
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Acetylcholinesterase, O-ETHYLMETHYLPHOSPHONIC ACID ESTER GROUP
Authors:Goldenzweig, A, Goldsmith, M, Hill, S.E, Gertman, O, Laurino, P, Ashani, Y, Dym, O, Albeck, S, Unger, T, Prilusky, J, Lieberman, R.L, Aharoni, A, Silman, I, Sussman, J.L, Tawfik, D.S, Fleishman, S.J.
Deposit date:2016-01-21
Release date:2016-07-27
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Automated Structure- and Sequence-Based Design of Proteins for High Bacterial Expression and Stability.
Mol.Cell, 63, 2016
8FRR
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BU of 8frr by Molmil
Wild-type myocilin olfactomedin domain
Descriptor: CALCIUM ION, GLYCEROL, Myocilin, ...
Authors:Ma, M.T, Lieberman, R.L, Huard, D.J.E.
Deposit date:2023-01-08
Release date:2024-01-17
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (1.27 Å)
Cite:Competition between inside-out unfolding and pathogenic aggregation in an amyloid-forming beta-propeller.
Nat Commun, 15, 2024
6ASQ
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BU of 6asq by Molmil
Structure of Grp94 bound to methyl 2-[2-(2-benzylpyridin-3-yl)ethyl]-3-chloro-4,6-dihydroxybenzoate, a pan-Hsp90 inhibitor
Descriptor: 3,6,9,12,15,18,21-HEPTAOXATRICOSANE-1,23-DIOL, DI(HYDROXYETHYL)ETHER, Endoplasmin, ...
Authors:Huard, D.J.E, Lieberman, R.L.
Deposit date:2017-08-25
Release date:2018-04-18
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Trifunctional High-Throughput Screen Identifies Promising Scaffold To Inhibit Grp94 and Treat Myocilin-Associated Glaucoma.
ACS Chem. Biol., 13, 2018
3RIK
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BU of 3rik by Molmil
The acid beta-glucosidase active site exhibits plasticity in binding 3,4,5,6-tetrahydroxyazepane-based inhibitors: implications for pharmacological chaperone design for gaucher disease
Descriptor: (3S,4R,5R,6S)-1-(2-hydroxyethyl)azepane-3,4,5,6-tetrol, 2-acetamido-2-deoxy-beta-D-glucopyranose, Glucosylceramidase, ...
Authors:Orwig, S.D, Lieberman, R.L.
Deposit date:2011-04-13
Release date:2012-03-14
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.48 Å)
Cite:Binding of 3,4,5,6-tetrahydroxyazepanes to the acid-beta-glucosidase active site: implications for pharmacological chaperone design for Gaucher disease
Biochemistry, 50, 2011
3RIL
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BU of 3ril by Molmil
The acid beta-glucosidase active site exhibits plasticity in binding 3,4,5,6-tetrahydroxyazepane-based inhibitors: implications for pharmacological chaperone design for gaucher disease
Descriptor: (3S,4R,5R,6S)-azepane-3,4,5,6-tetrol, 2-acetamido-2-deoxy-beta-D-glucopyranose, Glucosylceramidase, ...
Authors:Orwig, S.D, Lieberman, R.L.
Deposit date:2011-04-13
Release date:2012-03-14
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Binding of 3,4,5,6-tetrahydroxyazepanes to the acid-beta-glucosidase active site: implications for pharmacological chaperone design for Gaucher disease
Biochemistry, 50, 2011
8DYK
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BU of 8dyk by Molmil
Room temperature neutron structure of a fluorescent Ag8 cluster templated by a multistranded DNA scaffold
Descriptor: DNA (5'-D(*AP*AP*CP*CP*CP*C)-3'), SILVER ION
Authors:Meilleur, F, Lieberman, R.L, Petty, J.T.
Deposit date:2022-08-04
Release date:2023-08-02
Last modified:2024-05-22
Method:NEUTRON DIFFRACTION (2.1 Å)
Cite:Mapping H + in the Nanoscale (A 2 C 4 ) 2 -Ag 8 Fluorophore.
J Phys Chem Lett, 13, 2022
6MOZ
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BU of 6moz by Molmil
Structure of acid-beta-glucosidase in complex with an aromatic pyrrolidine iminosugar inhibitor
Descriptor: (2R,3S,4R)-2-{[4-(3,5-dichlorophenyl)-1H-1,2,3-triazol-1-yl]methyl}pyrrolidine-3,4-diol, 2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCEROL, ...
Authors:Patterson-Orazem, A.C, Lieberman, R.L.
Deposit date:2018-10-05
Release date:2019-06-19
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Exploring substituent diversity on pyrrolidine-aryltriazole iminosugars: Structural basis of beta-glucocerebrosidase inhibition.
Bioorg.Chem., 86, 2019
6NAX
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BU of 6nax by Molmil
Olfactomedin domain of mouse myocilin
Descriptor: CALCIUM ION, GLYCEROL, Myocilin, ...
Authors:Patterson-Orazem, A.C, Hill, S.E, Lieberman, R.L.
Deposit date:2018-12-06
Release date:2019-03-13
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.551 Å)
Cite:Differential Misfolding Properties of Glaucoma-Associated Olfactomedin Domains from Humans and Mice.
Biochemistry, 58, 2019
7RTG
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BU of 7rtg by Molmil
Crystal Structure of the Human Adenosine Deaminase 1
Descriptor: Adenosine deaminase, ZINC ION
Authors:Ma, M.T, Lieberman, R.L, Blazeck, J, Jennings, M.R.
Deposit date:2021-08-13
Release date:2022-01-12
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.591 Å)
Cite:Catalytically active holo Homo sapiens adenosine deaminase I adopts a closed conformation.
Acta Crystallogr D Struct Biol, 78, 2022
7SIJ
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BU of 7sij by Molmil
Myocilin OLF mutant E352K
Descriptor: CALCIUM ION, GLYCEROL, Myocilin, ...
Authors:Scelsi, H.S, Barlow, B.M, Lieberman, R.L.
Deposit date:2021-10-14
Release date:2023-01-11
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.54 Å)
Cite:Quantitative differentiation of benign and misfolded glaucoma-causing myocilin variants on the basis of protein thermal stability.
Dis Model Mech, 16, 2023
7SKE
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BU of 7ske by Molmil
Myocilin OLF mutant R296H
Descriptor: CALCIUM ION, GLYCEROL, Myocilin, ...
Authors:Scelsi, H.S, Barlow, B.M, Lieberman, R.L.
Deposit date:2021-10-20
Release date:2023-01-11
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.24 Å)
Cite:Quantitative differentiation of benign and misfolded glaucoma-causing myocilin variants on the basis of protein thermal stability.
Dis Model Mech, 16, 2023
7SJV
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BU of 7sjv by Molmil
Myocilin OLF mutant T353I
Descriptor: CALCIUM ION, Myocilin, C-terminal fragment, ...
Authors:Scelsi, H.S, Barlow, B.M, Lieberman, R.L.
Deposit date:2021-10-19
Release date:2023-01-11
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.39 Å)
Cite:Quantitative differentiation of benign and misfolded glaucoma-causing myocilin variants on the basis of protein thermal stability.
Dis Model Mech, 16, 2023
7SKF
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BU of 7skf by Molmil
Myocilin OLF mutant A445V
Descriptor: CALCIUM ION, GLYCEROL, Myocilin, ...
Authors:Scelsi, H.S, Barlow, B.M, Lieberman, R.L.
Deposit date:2021-10-20
Release date:2023-01-11
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.282 Å)
Cite:Quantitative differentiation of benign and misfolded glaucoma-causing myocilin variants on the basis of protein thermal stability.
Dis Model Mech, 16, 2023
7SJT
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BU of 7sjt by Molmil
Myocilin OLF mutant K398R
Descriptor: CALCIUM ION, Myocilin, C-terminal fragment, ...
Authors:Scelsi, H.S, Barlow, B.M, Lieberman, R.L.
Deposit date:2021-10-19
Release date:2023-01-11
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.54 Å)
Cite:Quantitative differentiation of benign and misfolded glaucoma-causing myocilin variants on the basis of protein thermal stability.
Dis Model Mech, 16, 2023
7SJW
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BU of 7sjw by Molmil
Myocilin OLF mutant L303I
Descriptor: CALCIUM ION, GLYCEROL, Myocilin, ...
Authors:Scelsi, H.S, Barlow, B.M, Lieberman, R.L.
Deposit date:2021-10-19
Release date:2023-01-11
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.38 Å)
Cite:Quantitative differentiation of benign and misfolded glaucoma-causing myocilin variants on the basis of protein thermal stability.
Dis Model Mech, 16, 2023
7SJU
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BU of 7sju by Molmil
Myocilin OLF mutant T293K
Descriptor: CALCIUM ION, GLYCEROL, Myocilin, ...
Authors:Scelsi, H.S, Barlow, B.M, Lieberman, R.L.
Deposit date:2021-10-19
Release date:2023-01-11
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.391 Å)
Cite:Quantitative differentiation of benign and misfolded glaucoma-causing myocilin variants on the basis of protein thermal stability.
Dis Model Mech, 16, 2023
7SIB
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BU of 7sib by Molmil
Myocilin OLF mutant K500R
Descriptor: CALCIUM ION, GLYCEROL, Myocilin, ...
Authors:Scelsi, H.S, Barlow, B.M, Lieberman, R.L.
Deposit date:2021-10-13
Release date:2023-01-11
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:Quantitative differentiation of benign and misfolded glaucoma-causing myocilin variants on the basis of protein thermal stability.
Dis Model Mech, 16, 2023
7SKD
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BU of 7skd by Molmil
Myocilin OLF mutant S331L
Descriptor: CALCIUM ION, Myocilin, C-terminal fragment, ...
Authors:Scelsi, H.S, Barlow, B.M, Lieberman, R.L.
Deposit date:2021-10-20
Release date:2023-01-11
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.712 Å)
Cite:Quantitative differentiation of benign and misfolded glaucoma-causing myocilin variants on the basis of protein thermal stability.
Dis Model Mech, 16, 2023
7SKG
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BU of 7skg by Molmil
Myocilin OLF mutant V329M
Descriptor: CALCIUM ION, GLYCEROL, Myocilin, ...
Authors:Scelsi, H.S, Barlow, B.M, Lieberman, R.L.
Deposit date:2021-10-20
Release date:2023-01-11
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.33 Å)
Cite:Quantitative differentiation of benign and misfolded glaucoma-causing myocilin variants on the basis of protein thermal stability.
Dis Model Mech, 16, 2023
7T8D
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BU of 7t8d by Molmil
Myocilin OLF mutant V449I
Descriptor: CALCIUM ION, GLYCEROL, Myocilin, ...
Authors:Scelsi, H.S, Barlow, B.M, Lieberman, R.L.
Deposit date:2021-12-16
Release date:2023-01-11
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.38 Å)
Cite:Quantitative differentiation of benign and misfolded glaucoma-causing myocilin variants on the basis of protein thermal stability.
Dis Model Mech, 16, 2023

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