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PDB: 42 results

5Y7T
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BU of 5y7t by Molmil
Quaternary complex of AsqJ-Fe3+-2OG-D-cyclopeptin
Descriptor: (3R)-4-methyl-3-(phenylmethyl)-1,3-dihydro-1,4-benzodiazepine-2,5-dione, 2-OXOGLUTARIC ACID, FE (III) ION, ...
Authors:Liao, H.J.
Deposit date:2017-08-18
Release date:2018-01-24
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Insights into the Desaturation of Cyclopeptin and its C3 Epimer Catalyzed by a non-Heme Iron Enzyme: Structural Characterization and Mechanism Elucidation.
Angew. Chem. Int. Ed. Engl., 57, 2018
5Y7R
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Quaternary complex of AsqJ-Fe3+-2OG-cyclopeptin
Descriptor: 2-OXOGLUTARIC ACID, FE (III) ION, Iron/alpha-ketoglutarate-dependent dioxygenase asqJ, ...
Authors:Liao, H.J, Lin, T.S.
Deposit date:2017-08-17
Release date:2018-01-24
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.96 Å)
Cite:Insights into the Desaturation of Cyclopeptin and its C3 Epimer Catalyzed by a non-Heme Iron Enzyme: Structural Characterization and Mechanism Elucidation.
Angew. Chem. Int. Ed. Engl., 57, 2018
6KD9
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BU of 6kd9 by Molmil
Binding pose 1 of 2-CF3 bound AsqJ complex
Descriptor: (3~{Z})-4-methyl-3-[[4-(trifluoromethyl)phenyl]methylidene]-1~{H}-1,4-benzodiazepine-2,5-dione, FE (III) ION, Iron/alpha-ketoglutarate-dependent dioxygenase asqJ, ...
Authors:Liao, H.J, Chan, N.L.
Deposit date:2019-07-01
Release date:2020-03-18
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.44 Å)
Cite:Binding pose 1 of 2-CF3 bound AsqJ complex
J.Am.Chem.Soc., 2020
6K0E
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BU of 6k0e by Molmil
The quinary complex of AsqJ-Fe-2OG-dehydrocyclopeptin-dioxygen
Descriptor: (3~{Z})-4-methyl-3-(phenylmethylidene)-1~{H}-1,4-benzodiazepine-2,5-dione, 2-OXOGLUTARIC ACID, FE (III) ION, ...
Authors:Liao, H.J, Chan, N.L.
Deposit date:2019-05-06
Release date:2020-03-18
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.707 Å)
Cite:The quinary complex of AsqJ-Fe-2OG-dehydrocyclopeptin-dioxygen
J.Am.Chem.Soc., 2020
6JZM
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BU of 6jzm by Molmil
The intermediate forming O-C10 bond formation in AsqJ-catalyzed epoxidation
Descriptor: (3~{R},3'~{S})-4-methyl-3'-phenyl-spiro[1~{H}-1,4-benzodiazepine-3,2'-oxirane]-2,5-dione, FE (III) ION, Iron/alpha-ketoglutarate-dependent dioxygenase asqJ, ...
Authors:Liao, H.J, Chan, N.L.
Deposit date:2019-05-02
Release date:2020-03-18
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.88 Å)
Cite:The intermediate forming O-C10 bond formation in AsqJ-catalyzed epoxidation
J.Am.Chem.Soc., 2020
6K30
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BU of 6k30 by Molmil
Binding pose 2 of 2-CF3 bound AsqJ complex
Descriptor: (3~{Z})-4-methyl-3-[[4-(trifluoromethyl)phenyl]methylidene]-1~{H}-1,4-benzodiazepine-2,5-dione, FE (III) ION, Iron/alpha-ketoglutarate-dependent dioxygenase asqJ, ...
Authors:Liao, H.J, Chan, N.L.
Deposit date:2019-05-15
Release date:2020-03-18
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.684 Å)
Cite:Binding pose 2 of 2-CF3 bound AsqJ complex
J.Am.Chem.Soc., 2020
6K0F
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BU of 6k0f by Molmil
The crystal structure of cyclopenin-bound AsqJ quinary complex
Descriptor: (3~{R},3'~{S})-4-methyl-3'-phenyl-spiro[1~{H}-1,4-benzodiazepine-3,2'-oxirane]-2,5-dione, 2-OXOGLUTARIC ACID, FE (III) ION, ...
Authors:Liao, H.J, Chan, N.L.
Deposit date:2019-05-06
Release date:2020-03-18
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.634 Å)
Cite:The crystal structure of cyclopenin-bound AsqJ quinary complex
J.Am.Chem.Soc., 2020
6KV2
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BU of 6kv2 by Molmil
Crystal structure of trypsin inhibitor 1 from Senna obtusifolia
Descriptor: Trypsin inhibitor 1
Authors:Liao, H, Yu, Y.
Deposit date:2019-09-03
Release date:2020-02-19
Method:X-RAY DIFFRACTION (2.003 Å)
Cite:Structural and functional relationship of Cassia obtusifolia trypsin inhibitor to understand its digestive resistance against Pieris rapae.
Int.J.Biol.Macromol., 148, 2020
7XAZ
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BU of 7xaz by Molmil
Crystal structure of Omicron BA.1.1 RBD complexed with hACE2
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Angiotensin-converting enzyme 2, ...
Authors:Liao, H, Meng, Y, Li, W.
Deposit date:2022-03-19
Release date:2022-07-06
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structural basis of human ACE2 higher binding affinity to currently circulating Omicron SARS-CoV-2 sub-variants BA.2 and BA.1.1.
Cell, 185, 2022
1DMZ
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BU of 1dmz by Molmil
A REFINED NMR STRUCTURE OF A NEW PHOPHOPEPTIDE-BINDING DOMAIN CONTAINING THE FHA2 OF RAD53
Descriptor: PROTEIN (PROTEIN KINASE SPK1)
Authors:Byeon, I.-J.L, Liao, H, Tsai, M.-D.
Deposit date:1999-12-15
Release date:2000-01-06
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Structure and Function of a New Phosphopeptide-Binding Domain Containing the Fha2 of Rad53
J.Mol.Biol., 294, 1999
4V6S
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BU of 4v6s by Molmil
Structural characterization of mRNA-tRNA translocation intermediates (class 3 of the six classes)
Descriptor: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
Authors:Agirrezabala, X, Liao, H, Schreiner, E, Fu, J, Ortiz-Meoz, R.F, Schulten, K, Green, R, Frank, J.
Deposit date:2011-12-09
Release date:2014-07-09
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (13.1 Å)
Cite:Structural characterization of mRNA-tRNA translocation intermediates.
Proc.Natl.Acad.Sci.USA, 109, 2012
4V6O
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BU of 4v6o by Molmil
Structural characterization of mRNA-tRNA translocation intermediates (class 4a of the six classes)
Descriptor: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
Authors:Agirrezabala, X, Liao, H, Schreiner, E, Fu, J, Ortiz-Meoz, R.F, Schulten, K, Green, R, Frank, J.
Deposit date:2011-12-07
Release date:2014-07-09
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (14.7 Å)
Cite:Structural characterization of mRNA-tRNA translocation intermediates.
Proc.Natl.Acad.Sci.USA, 109, 2012
4V6Q
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BU of 4v6q by Molmil
Structural characterization of mRNA-tRNA translocation intermediates (class 5 of the six classes)
Descriptor: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
Authors:Agirrezabala, X, Liao, H, Schreiner, E, Fu, J, Ortiz-Meoz, R.F, Schulten, K, Green, R, Frank, J.
Deposit date:2011-12-08
Release date:2014-07-09
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (11.5 Å)
Cite:Structural characterization of mRNA-tRNA translocation intermediates.
Proc.Natl.Acad.Sci.USA, 109, 2012
4V6P
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BU of 4v6p by Molmil
Structural characterization of mRNA-tRNA translocation intermediates (class 4b of the six classes)
Descriptor: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
Authors:Agirrezabala, X, Liao, H, Schreiner, E, Fu, J, Ortiz-Meoz, R.F, Schulten, K, Green, R, Frank, J.
Deposit date:2011-12-08
Release date:2014-07-09
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (13.5 Å)
Cite:Structural characterization of mRNA-tRNA translocation intermediates.
Proc.Natl.Acad.Sci.USA, 109, 2012
4V6R
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BU of 4v6r by Molmil
Structural characterization of mRNA-tRNA translocation intermediates (class 6 of the six classes)
Descriptor: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
Authors:Agirrezabala, X, Liao, H, Schreiner, E, Fu, J, Ortiz-Meoz, R.F, Schulten, K, Green, R, Frank, J.
Deposit date:2011-12-08
Release date:2014-07-09
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (11.5 Å)
Cite:Structural characterization of mRNA-tRNA translocation intermediates.
Proc.Natl.Acad.Sci.USA, 109, 2012
4V6N
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BU of 4v6n by Molmil
Structural characterization of mRNA-tRNA translocation intermediates (50S ribosome of class2 of the six classes)
Descriptor: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
Authors:Agirrezabala, X, Liao, H, Schreiner, E, Fu, J, Ortiz-Meoz, R.F, Schulten, K, Green, R, Frank, J.
Deposit date:2011-12-07
Release date:2014-07-09
Last modified:2024-02-28
Method:ELECTRON MICROSCOPY (12.1 Å)
Cite:Structural characterization of mRNA-tRNA translocation intermediates.
Proc.Natl.Acad.Sci.USA, 109, 2012
4V8M
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BU of 4v8m by Molmil
High-resolution cryo-electron microscopy structure of the Trypanosoma brucei ribosome
Descriptor: 18S RRNA OF THE SMALL RIBOSOMAL SUBUNIT, 40S RIBOSOMAL PROTEIN S10, PUTATIVE, ...
Authors:Hashem, Y, des Georges, A, Fu, J, Buss, S.N, Jossinet, F, Jobe, A, Zhang, Q, Liao, H.Y, Grassucci, R.A, Bajaj, C, Westhof, E, Madison-Antenucci, S, Frank, J.
Deposit date:2012-12-09
Release date:2014-07-09
Last modified:2019-12-11
Method:ELECTRON MICROSCOPY (5.57 Å)
Cite:High-Resolution Cryo-Electron Microscopy Structure of the Trypanosoma Brucei Ribosome.
Nature, 494, 2013
1A8Y
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BU of 1a8y by Molmil
CRYSTAL STRUCTURE OF CALSEQUESTRIN FROM RABBIT SKELETAL MUSCLE SARCOPLASMIC RETICULUM AT 2.4 A RESOLUTION
Descriptor: CALSEQUESTRIN
Authors:Wang, S, Trumble, W.R, Liao, H, Wesson, C.R, Dunker, A.K, Kang, C.
Deposit date:1998-03-31
Release date:1999-03-30
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of calsequestrin from rabbit skeletal muscle sarcoplasmic reticulum.
Nat.Struct.Biol., 5, 1998
7YRN
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BU of 7yrn by Molmil
Cyro-EM structure of HCMV glycoprotein B in complex with 1B03 Fab
Descriptor: 1B03 Fab antibody Heavy Chain, 1B03 Fab antibody Light Chain, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Wang, H, Zhu, S, Liao, H.
Deposit date:2022-08-10
Release date:2023-08-16
Method:ELECTRON MICROSCOPY (2.99 Å)
Cite:Cyro-EM structure of HCMV glycoprotein B in complex with 1B03 Fab
To Be Published
4QF1
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BU of 4qf1 by Molmil
Crystal structure of unliganded CH59UA, the inferred unmutated ancestor of the RV144 anti-HIV antibody lineage producing CH59
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CH59UA Fab fragment of heavy chain, CHLORIDE ION, ...
Authors:Wiehe, K, Easterhoff, D, Luo, K, Nicely, N.I, Bradley, T, Jaeger, F.H, Dennison, S.M, Zhang, R, Lloyd, K.E, Stolarchuk, C, Parks, R, Sutherland, L.L, Scearce, R.M, Morris, L, Kaewkungwal, J, Nitayaphan, S, Pitisuttithum, P, Rerks-Ngarm, S, Michael, N, Kim, J, Kelsoe, G, Montefiori, D.C, Tomaras, G, Bonsignori, M, Santra, S, Kepler, T.B, Alam, S.M, Moody, M.A, Liao, H.-X, Haynes, B.F.
Deposit date:2014-05-19
Release date:2015-02-18
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Antibody Light-Chain-Restricted Recognition of the Site of Immune Pressure in the RV144 HIV-1 Vaccine Trial Is Phylogenetically Conserved.
Immunity, 41, 2014
4RIS
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BU of 4ris by Molmil
Structural Analysis of the Unmutated Ancestor of the HIV-1 Envelope V2 Region Antibody CH58 Isolated From an RV144 HIV-1 Vaccine Efficacy Trial Vaccinee and Associated with Decreased Transmission Risk
Descriptor: CH58-UA Fab heavy chain, CH58-UA Fab light chain, Envelope glycoprotein
Authors:Nicely, N.I, Wiehe, K, Kepler, T.B, Jaeger, F.H, Dennison, S.M, Liao, H.-X, Alam, S.M, Hwang, K.-K, Bonsignori, M, Rerks-Ngarm, S, Nitayaphan, S, Pitisuttithum, P, Kaewkungwal, J, Robb, M.L, O'Connell, R.J, Michael, N.L, Kim, J.H, Haynes, B.F.
Deposit date:2014-10-07
Release date:2015-08-12
Last modified:2015-09-02
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural analysis of the unmutated ancestor of the HIV-1 envelope V2 region antibody CH58 isolated from an RV144 vaccine efficacy trial vaccinee.
EBioMedicine, 2, 2015
4RIR
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BU of 4rir by Molmil
Structural Analysis of the Unmutated Ancestor of the HIV-1 Envelope V2 Region Antibody CH58 Isolated From an RV144 HIV-1 Vaccine Efficacy Trial Vaccinee and Associated with Decreased Transmission Risk
Descriptor: CH58-UA Fab heavy chain, CH58-UA Fab light chain
Authors:Nicely, N.I, Wiehe, K, Kepler, T.B, Jaeger, F.H, Dennison, S.M, Liao, H.-X, Alam, S.M, Hwang, K.-K, Bonsignori, M, Rerks-Ngarm, S, Nitayaphan, S, Pitisuttithum, P, Kaewkungwal, J, Robb, M.L, O'Connell, R.J, Michael, N.L, Kim, J.H, Haynes, B.F.
Deposit date:2014-10-07
Release date:2015-08-12
Last modified:2015-09-02
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural analysis of the unmutated ancestor of the HIV-1 envelope V2 region antibody CH58 isolated from an RV144 vaccine efficacy trial vaccinee.
EBioMedicine, 2, 2015
1FHR
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BU of 1fhr by Molmil
SOLUTION STRUCTURE OF THE FHA2 DOMAIN OF RAD53 COMPLEXED WITH A PHOSPHOTYROSYL PEPTIDE
Descriptor: DNA REPAIR PROTEIN RAD9, PROTEIN KINASE SPK1
Authors:Byeon, I.-J.L, Liao, H, Yongkiettrakul, S, Tsai, M.-D.
Deposit date:2000-08-02
Release date:2000-10-18
Last modified:2022-02-23
Method:SOLUTION NMR
Cite:II. Structure and specificity of the interaction between the FHA2 domain of Rad53 and phosphotyrosyl peptides.
J.Mol.Biol., 302, 2000
1FHQ
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BU of 1fhq by Molmil
REFINED SOLUTION STRUCTURE OF THE FHA2 DOMAIN OF RAD53
Descriptor: PROTEIN KINASE SPK1
Authors:Byeon, I.-J.L, Liao, H, Tsai, M.-D.
Deposit date:2000-08-02
Release date:2000-10-18
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:II. Structure and specificity of the interaction between the FHA2 domain of Rad53 and phosphotyrosyl peptides.
J.Mol.Biol., 302, 2000
1G3G
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BU of 1g3g by Molmil
NMR STRUCTURE OF THE FHA1 DOMAIN OF YEAST RAD53
Descriptor: PROTEIN KINASE SPK1
Authors:Yuan, C, Liao, H, Su, M, Yongkiettrakul, S, Byeon, I.-J.L, Tsai, M.-D.
Deposit date:2000-10-24
Release date:2001-01-10
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Structure of the FHA1 domain of yeast Rad53 and identification of binding sites for both FHA1 and its target protein Rad9
J.Mol.Biol., 304, 2000

 

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