Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 1064 results

2JOH
DownloadVisualize
BU of 2joh by Molmil
NMR structure of rabbit prion protein mutation S173N
Descriptor: Major prion protein
Authors:Li, J, Lin, D.
Deposit date:2007-03-13
Release date:2008-02-19
Last modified:2024-11-20
Method:SOLUTION NMR
Cite:Unique structural characteristics of the rabbit prion protein.
J.Biol.Chem., 285, 2010
4Y7K
DownloadVisualize
BU of 4y7k by Molmil
Structure of an archaeal mechanosensitive channel in closed state
Descriptor: Large conductance mechanosensitive channel protein,Riboflavin synthase
Authors:Li, J, Liu, Z.
Deposit date:2015-02-15
Release date:2015-08-26
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Mechanical coupling of the multiple structural elements of the large-conductance mechanosensitive channel during expansion
Proc.Natl.Acad.Sci.USA, 112, 2015
4Y7J
DownloadVisualize
BU of 4y7j by Molmil
Structure of an archaeal mechanosensitive channel in expanded state
Descriptor: Large conductance mechanosensitive channel protein,Riboflavin synthase, nonyl beta-D-glucopyranoside
Authors:Li, J, Liu, Z.
Deposit date:2015-02-15
Release date:2015-08-26
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (4.1 Å)
Cite:Mechanical coupling of the multiple structural elements of the large-conductance mechanosensitive channel during expansion
Proc.Natl.Acad.Sci.USA, 112, 2015
3FP4
DownloadVisualize
BU of 3fp4 by Molmil
Crystal structure of Tom71 complexed with Ssa1 C-terminal fragment
Descriptor: CHLORIDE ION, SODIUM ION, SULFATE ION, ...
Authors:Li, J, Qian, X, Hu, J, Sha, B.
Deposit date:2009-01-03
Release date:2009-07-28
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.14 Å)
Cite:Molecular chaperone Hsp70/Hsp90 prepares the mitochondrial outer membrane translocon receptor Tom71 for preprotein loading.
J.Biol.Chem., 284, 2009
2JOM
DownloadVisualize
BU of 2jom by Molmil
NMR structure of rabbit prion protein mutation I214V
Descriptor: Major prion protein
Authors:Li, J, Lin, D.
Deposit date:2007-03-14
Release date:2008-01-29
Last modified:2024-11-27
Method:SOLUTION NMR
Cite:Solution Structure and Dynamics of the I214V Mutant of the Rabbit Prion Protein.
Plos One, 5, 2010
9JS4
DownloadVisualize
BU of 9js4 by Molmil
Cryo-EM structure of neutralizing antibody 8G3 in complex with BA.1 RBD
Descriptor: Heavy chain of 8G3, Light chain of 8G3, Spike glycoprotein
Authors:Li, J, Li, H.
Deposit date:2024-09-30
Release date:2025-01-22
Last modified:2025-02-26
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Rapid restoration of potent neutralization activity against the latest Omicron variant JN.1 via AI rational design and antibody engineering.
Proc.Natl.Acad.Sci.USA, 122, 2025
1YZX
DownloadVisualize
BU of 1yzx by Molmil
Crystal structure of human kappa class glutathione transferase
Descriptor: Glutathione S-transferase kappa 1, L-GAMMA-GLUTAMYL-3-SULFINO-L-ALANYLGLYCINE
Authors:Li, J, Xia, Z, Ding, J.
Deposit date:2005-02-28
Release date:2005-11-15
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:Thioredoxin-like domain of human kappa class glutathione transferase reveals sequence homology and structure similarity to the theta class enzyme
PROTEIN SCI., 14, 2005
2JQW
DownloadVisualize
BU of 2jqw by Molmil
A novel lectin-like peptide from Odorrana grahami
Descriptor: lectin-like peptide
Authors:Li, J, Lin, D, Lai, R.
Deposit date:2007-06-13
Release date:2008-06-17
Last modified:2024-11-06
Method:SOLUTION NMR
Cite:A novel lectin-like peptide from Odorrana grahami
To be Published
9IV3
DownloadVisualize
BU of 9iv3 by Molmil
Crystal structure of CcmS-CcmK1 complex from Synechocystis sp. PCC 6803
Descriptor: Carboxysome shell protein CcmK1, Slr1911 protein
Authors:Li, J, Deng, J.X, Jiang, Y.L, Zhou, C.Z.
Deposit date:2024-07-22
Release date:2025-03-12
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:Assembly mechanism of beta-carboxysome shell mediated by the chaperone CcmS
To Be Published
9IUR
DownloadVisualize
BU of 9iur by Molmil
Crystal structure of CcmS from Synechocystis sp. PCC 6803
Descriptor: IODIDE ION, Slr1911 protein
Authors:Li, J, Deng, J.X, Jiang, Y.L, Zhou, C.Z.
Deposit date:2024-07-22
Release date:2025-03-12
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Assembly mechanism of beta-carboxysome shell mediated by the chaperone CcmS
To Be Published
9IV7
DownloadVisualize
BU of 9iv7 by Molmil
Crystal structure of CcmS-CcmK1-CcmK2 complex from Synechocystis sp. PCC 6803
Descriptor: Carboxysome shell protein CcmK1, Carboxysome shell protein CcmK2, D(-)-TARTARIC ACID, ...
Authors:Li, J, Deng, J.X, Jiang, Y.L, Zhou, C.Z.
Deposit date:2024-07-23
Release date:2025-03-12
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Assembly mechanism of beta-carboxysome shell mediated by the chaperone CcmS
To Be Published
4RLJ
DownloadVisualize
BU of 4rlj by Molmil
Crystal Structure of (3R)-hydroxyacyl-ACP dehydratase HadAB hetero-dimer from Mycobacterium tuberculosis
Descriptor: (3R)-hydroxyacyl-ACP dehydratase subunit HadA, (3R)-hydroxyacyl-ACP dehydratase subunit HadB, 3,6,9,12,15,18-HEXAOXAICOSANE-1,20-DIOL, ...
Authors:Li, J, Dong, Y, Rao, Z.H.
Deposit date:2014-10-17
Release date:2015-10-21
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Molecular basis for the inhibition of beta-hydroxyacyl-ACP dehydratase HadAB complex from Mycobacterium tuberculosis by flavonoid inhibitors.
Protein Cell, 6, 2015
4RLW
DownloadVisualize
BU of 4rlw by Molmil
Crystal Structure of (3R)-hydroxyacyl-ACP dehydratase HadAB hetero-dimer from Mycobacterium tuberculosis complexed with Butein
Descriptor: (2E)-1-(2,4-dihydroxyphenyl)-3-(3,4-dihydroxyphenyl)prop-2-en-1-one, (3R)-hydroxyacyl-ACP dehydratase subunit HadA, (3R)-hydroxyacyl-ACP dehydratase subunit HadB, ...
Authors:Li, J, Dong, Y, Rao, Z.H.
Deposit date:2014-10-18
Release date:2015-10-21
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.196 Å)
Cite:Molecular basis for the inhibition of beta-hydroxyacyl-ACP dehydratase HadAB complex from Mycobacterium tuberculosis by flavonoid inhibitors.
Protein Cell, 6, 2015
3T0H
DownloadVisualize
BU of 3t0h by Molmil
Structure insights into mechanisms of ATP hydrolysis and the activation of human Hsp90
Descriptor: Heat shock protein HSP 90-alpha
Authors:Li, J.
Deposit date:2011-07-20
Release date:2012-01-25
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Structure insights into mechanisms of ATP hydrolysis and the activation of human heat-shock protein 90.
Acta Biochim Biophys Sin (Shanghai), 44, 2012
3T0Z
DownloadVisualize
BU of 3t0z by Molmil
Hsp90 N-terminal domain bound to ATP
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Heat shock protein HSP 90-alpha, MAGNESIUM ION
Authors:Li, J.
Deposit date:2011-07-21
Release date:2012-01-25
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.192 Å)
Cite:Structure insights into mechanisms of ATP hydrolysis and the activation of human heat-shock protein 90.
Acta Biochim Biophys Sin (Shanghai), 44, 2012
4RLU
DownloadVisualize
BU of 4rlu by Molmil
Crystal Structure of (3R)-hydroxyacyl-ACP dehydratase HadAB hetero-dimer from Mycobacterium tuberculosis complexed with 2',4,4'-trihydroxychalcone
Descriptor: (3R)-hydroxyacyl-ACP dehydratase subunit HadA, (3R)-hydroxyacyl-ACP dehydratase subunit HadB, 2',4,4'-TRIHYDROXYCHALCONE, ...
Authors:Li, J, Dong, Y, Rao, Z.H.
Deposit date:2014-10-18
Release date:2015-10-21
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.198 Å)
Cite:Molecular basis for the inhibition of beta-hydroxyacyl-ACP dehydratase HadAB complex from Mycobacterium tuberculosis by flavonoid inhibitors.
Protein Cell, 6, 2015
9IVM
DownloadVisualize
BU of 9ivm by Molmil
Cryo-EM structure of the GLP-1(9-36)-bound human GLP-1R-Gs complex in the presence of LSN3318839
Descriptor: (2~{R})-2-[2-[1-[(1~{R})-1-[2,6-bis(chloranyl)-3-cyclopropyl-phenyl]ethyl]imidazo[4,5-c]pyridin-6-yl]phenyl]propanoic acid, GLP-1(9-36), Glucagon-like peptide 1 receptor, ...
Authors:Li, J, Li, G, Mai, Y, Liu, X, Yang, D, Zhou, Q, Wang, M.-W.
Deposit date:2024-07-24
Release date:2024-11-13
Last modified:2024-12-25
Method:ELECTRON MICROSCOPY (3.22 Å)
Cite:Molecular basis of enhanced GLP-1 signaling mediated by GLP-1(9-36) in conjunction with LSN3318839.
Acta Pharm Sin B, 14, 2024
9IVG
DownloadVisualize
BU of 9ivg by Molmil
Cryo-EM structure of the GLP-1(9-36)-bound human GLP-1R-Gs complex
Descriptor: GLP-1(9-36), Glucagon-like peptide 1 receptor, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, ...
Authors:Li, J, Li, G, Mai, Y, Liu, X, Yang, D, Zhou, Q, Wang, M.-W.
Deposit date:2024-07-23
Release date:2024-11-27
Last modified:2024-12-25
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Molecular basis of enhanced GLP-1 signaling mediated by GLP-1(9-36) in conjunction with LSN3318839.
Acta Pharm Sin B, 14, 2024
5XSS
DownloadVisualize
BU of 5xss by Molmil
XylFII molecule
Descriptor: Periplasmic binding protein/LacI transcriptional regulator, beta-D-xylopyranose
Authors:Li, J.X, Wang, C.Y, Zhang, P.
Deposit date:2017-06-15
Release date:2017-08-02
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.093 Å)
Cite:Molecular mechanism of environmental d-xylose perception by a XylFII-LytS complex in bacteria
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
3T1K
DownloadVisualize
BU of 3t1k by Molmil
HSP90 N-terminal domain bound to ANP
Descriptor: Heat shock protein HSP 90-alpha, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
Authors:Li, J.
Deposit date:2011-07-22
Release date:2012-01-25
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:HSP90 N-terminal domain bound to ANP
To be published
9K2C
DownloadVisualize
BU of 9k2c by Molmil
Structure of ClpP from Staphylococcus aureus in complex with ZY1
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, (6~{S},9~{a}~{S})-6-(1~{H}-imidazol-5-ylmethyl)-8-(naphthalen-1-ylmethyl)-4,7-bis(oxidanylidene)-~{N}-(phenylmethyl)-3,6,9,9~{a}-tetrahydro-2~{H}-pyrazino[1,2-a]pyrimidine-1-carboxamide, ATP-dependent Clp protease proteolytic subunit, ...
Authors:Li, J.H, Wu, W, Zhang, T, Yang, C.-G.
Deposit date:2024-10-17
Release date:2025-02-19
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:Structure-Guided Development of ClpP Agonists with Potent Therapeutic Activities against Staphylococcus aureus Infection.
J.Med.Chem., 68, 2025
9K2K
DownloadVisualize
BU of 9k2k by Molmil
Structure of ClpP from Staphylococcus aureus in complex with ZY7
Descriptor: (6~{S},9~{a}~{S})-6-(2-methylpropyl)-8-(naphthalen-1-ylmethyl)-4,7-bis(oxidanylidene)-~{N}-(phenylmethyl)-3,6,9,9~{a}-tetrahydro-2~{H}-pyrazino[1,2-a]pyrimidine-1-carboxamide, ATP-dependent Clp protease proteolytic subunit
Authors:Li, J.H, Wu, W, Zhang, T, Yang, C.-G.
Deposit date:2024-10-17
Release date:2025-02-19
Method:X-RAY DIFFRACTION (2.74 Å)
Cite:Structure-Guided Development of ClpP Agonists with Potent Therapeutic Activities against Staphylococcus aureus Infection.
J.Med.Chem., 68, 2025
5XRE
DownloadVisualize
BU of 5xre by Molmil
Crystal Structure of the human Hsp90-alpha N-domain bound to the hsp90 inhibitor JX1
Descriptor: Heat shock protein HSP 90-alpha, N-[4-(4-methoxyphenyl)-3-[5-(8-methylquinolin-5-yl)-2,4-bis(oxidanyl)phenyl]-1,2-oxazol-5-yl]ethanamide
Authors:Li, J, Shi, F, Xiong, B, He, J.H.
Deposit date:2017-06-08
Release date:2018-07-04
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.497 Å)
Cite:Crystal Structure of the human Hsp90-alpha N-domain bound to the hsp90 inhibitor JX1
To Be Published
5XQE
DownloadVisualize
BU of 5xqe by Molmil
Crystal structure of Human Hsp90 with FS3
Descriptor: Heat shock protein HSP 90-alpha, N-[3-[5-chloranyl-2,4-bis(oxidanyl)phenyl]-4-(4-methoxyphenyl)-1,2-oxazol-5-yl]-2-methyl-propanamide
Authors:Li, J, Shi, F, Xiong, B, He, J.H.
Deposit date:2017-06-07
Release date:2018-06-20
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.699 Å)
Cite:Crystal structure of Human Hsp90 with FS3
To Be Published
5XRD
DownloadVisualize
BU of 5xrd by Molmil
Crystal Structure of the human Hsp90-alpha N-domain bound to the hsp90 inhibitor FS7
Descriptor: Heat shock protein HSP 90-alpha, N-{3-[2,4-dihydroxy-5-(propan-2-yl)phenyl]-4-(4-methoxyphenyl)-1H-pyrazol-5-yl}acetamide
Authors:Li, J, Shi, F, Xiong, B, He, J.H.
Deposit date:2017-06-08
Release date:2019-05-22
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Crystal Structure of the human Hsp90-alpha N-domain bound to the hsp90 inhibitor FS7
To Be Published

237423

PDB entries from 2025-06-11

PDB statisticsPDBj update infoContact PDBjnumon