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PDB: 579 件

7VPA
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BU of 7vpa by Molmil
Crystal structure of Ple629 from marine microbial consortium
分子名称: hydrolase Ple629
著者Wu, P, Zhao, Y.P, Li, Z.S, Ingrid, M.C, Lara, P, Gao, J, Han, X, Li, Q, Basak, O, Liu, W.D, Wei, R.
登録日2021-10-15
公開日2022-08-24
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Molecular and Biochemical Differences of the Tandem and Cold-Adapted PET Hydrolases Ple628 and Ple629, Isolated From a Marine Microbial Consortium.
Front Bioeng Biotechnol, 10, 2022
7VMD
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BU of 7vmd by Molmil
Crystal structure of a hydrolases Ple628 from marine microbial consortium
分子名称: CALCIUM ION, hydrolase Ple628
著者Wu, P, Zhao, Y.P, Li, Z.S, Ingrid, M.C, Lara, P, Gao, J, Han, X, Li, Q, Basak, O, Liu, W.D, Wei, R.
登録日2021-10-08
公開日2022-08-24
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.69 Å)
主引用文献Molecular and Biochemical Differences of the Tandem and Cold-Adapted PET Hydrolases Ple628 and Ple629, Isolated From a Marine Microbial Consortium.
Front Bioeng Biotechnol, 10, 2022
8IN8
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BU of 8in8 by Molmil
Cryo-EM structure of the target ssDNA-bound SIR2-APAZ/Ago-gRNA quaternary complex
分子名称: DNA (5'-D(P*AP*AP*CP*GP*AP*CP*GP*TP*CP*TP*AP*AP*GP*AP*AP*AP*CP*CP*AP*TP*TP*AP*A)-3'), MAGNESIUM ION, Piwi domain protein, ...
著者Zhang, H, Li, Z, Yu, G.M, Li, X.Z, Wang, X.S.
登録日2023-03-08
公開日2023-07-05
最終更新日2023-09-13
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Structural insights into mechanisms of Argonaute protein-associated NADase activation in bacterial immunity.
Cell Res., 33, 2023
8I88
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Cryo-EM structure of TIR-APAZ/Ago-gRNA complex
分子名称: Piwi domain-containing protein, RNA (5'-R(P*GP*A)-3'), TIR domain-containing protein
著者Zhang, H, Li, Z, Yu, G.M, Li, X.Z, Wang, X.S.
登録日2023-02-03
公開日2023-07-05
最終更新日2023-09-13
実験手法ELECTRON MICROSCOPY (3.7 Å)
主引用文献Structural insights into mechanisms of Argonaute protein-associated NADase activation in bacterial immunity.
Cell Res., 33, 2023
8XMN
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BU of 8xmn by Molmil
Voltage-gated sodium channel Nav1.7 variant M2
分子名称: 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1-O-OCTADECYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Yan, N, Li, Z, Wu, Q, Huang, G.
登録日2023-12-27
公開日2024-03-06
最終更新日2024-10-09
実験手法ELECTRON MICROSCOPY (3.37 Å)
主引用文献Dissection of the structure-function relationship of Na v channels.
Proc.Natl.Acad.Sci.USA, 121, 2024
8XMO
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BU of 8xmo by Molmil
Voltage-gated sodium channel Nav1.7 variant M4
分子名称: 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1-O-OCTADECYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Yan, N, Li, Z, Wu, Q, Huang, G.
登録日2023-12-27
公開日2024-03-06
実験手法ELECTRON MICROSCOPY (3.39 Å)
主引用文献Dissection of the structure-function relationship of Na v channels.
Proc.Natl.Acad.Sci.USA, 121, 2024
8I3Q
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BU of 8i3q by Molmil
Cryo-EM structure of Cas12g-sgRNA binary complex
分子名称: Cas12g, RNA (139-MER), ZINC ION
著者Ouyang, S.Y, Liu, M.X, Li, Z.K.
登録日2023-01-17
公開日2023-09-06
最終更新日2023-10-04
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Structural transitions upon guide RNA binding and their importance in Cas12g-mediated RNA cleavage.
Plos Genet., 19, 2023
8JA0
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BU of 8ja0 by Molmil
Cryo-EM structure of the NmeCas9-sgRNA-AcrIIC4 ternary complex
分子名称: CRISPR-associated endonuclease Cas9, RNA (117-MER), Uncharacterized protein
著者Yin, H, Li, Z, Yu, G.M, Li, X.Z.
登録日2023-05-05
公開日2023-08-09
最終更新日2024-07-03
実験手法ELECTRON MICROSCOPY (3.52 Å)
主引用文献Cryo-EM structure of the NmeCas9-sgRNA-AcrIIC4 ternary complex
To Be Published
8IWH
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BU of 8iwh by Molmil
Structure and characteristics of a photosystem II supercomplex containing monomeric LHCX and dimeric FCPII antennae from the diatom Thalassiosira pseudonana
分子名称: (1~{R})-3,5,5-trimethyl-4-[(1~{E},3~{E},5~{E},7~{E},9~{E},11~{E},13~{E},15~{E})-3,7,12,16-tetramethyl-18-[(4~{R})-2,6,6-trimethyl-4-oxidanyl-cyclohexen-1-yl]octadeca-1,3,5,7,9,11,13,15-octaen-17-ynyl]cyclohex-3-en-1-ol, (3S,3'R,5R,6S,7cis)-7',8'-didehydro-5,6-dihydro-5,6-epoxy-beta,beta-carotene-3,3'-diol, (3S,3'S,5R,5'R,6S,6'R,8'R)-3,5'-dihydroxy-8-oxo-6',7'-didehydro-5,5',6,6',7,8-hexahydro-5,6-epoxy-beta,beta-caroten-3'- yl acetate, ...
著者Feng, Y, Li, Z.H, Wang, W.D, Shen, J.R.
登録日2023-03-30
公開日2023-10-25
最終更新日2023-11-08
実験手法ELECTRON MICROSCOPY (2.68 Å)
主引用文献Structure of a diatom photosystem II supercomplex containing a member of Lhcx family and dimeric FCPII.
Sci Adv, 9, 2023
3RKZ
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Discovery of a stable macrocyclic o-aminobenzamide Hsp90 inhibitor capable of significantly decreasing tumor volume in a mouse xenograft model.
分子名称: (5R,6S)-3-(L-alanyl)-5,6,15,15,18-pentamethyl-17-oxo-2,3,4,5,6,7,14,15,16,17-decahydro-1H-12,8-(metheno)[1,5,9]triazacyclotetradecino[1,2-a]indole-9-carboxamide, Heat shock protein HSP 90-alpha
著者Zapf, C.W, Bloom, J.D, Li, Z, Dushin, R.G, Nittoli, T, Otteng, M, Nikitenko, A, Golas, J.M, Liu, H, Lucas, J, Boschelli, F, Vogan, E, Olland, A, Johnson, M, Levin, J.I.
登録日2011-04-18
公開日2011-07-13
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.5693 Å)
主引用文献Discovery of a stable macrocyclic o-aminobenzamide Hsp90 inhibitor which significantly decreases tumor volume in a mouse xenograft model.
Bioorg.Med.Chem.Lett., 21, 2011
1PYM
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BU of 1pym by Molmil
PHOSPHOENOLPYRUVATE MUTASE FROM MOLLUSK IN WITH BOUND MG2-OXALATE
分子名称: MAGNESIUM ION, OXALATE ION, PROTEIN (PHOSPHOENOLPYRUVATE MUTASE)
著者Huang, K, Li, Z, Herzberg, O.
登録日1999-02-25
公開日1999-07-21
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Helix swapping between two alpha/beta barrels: crystal structure of phosphoenolpyruvate mutase with bound Mg(2+)-oxalate.
Structure Fold.Des., 7, 1999
3OW8
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BU of 3ow8 by Molmil
Crystal Structure of the WD repeat-containing protein 61
分子名称: UNKNOWN ATOM OR ION, WD repeat-containing protein 61
著者Tempel, W, Li, Z, Chao, X, Lam, R, Wernimont, A.K, He, H, Seitova, A, Pan, P.W, Li, Y, Bountra, C, Weigelt, J, Arrowsmith, C.H, Edwards, A.M, Bochkarev, A, Min, J, Structural Genomics Consortium (SGC)
登録日2010-09-17
公開日2010-09-29
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structure and function of WD40 domain proteins.
Protein Cell, 2, 2011
3SHB
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BU of 3shb by Molmil
Crystal Structure of PHD Domain of UHRF1
分子名称: E3 ubiquitin-protein ligase UHRF1, Histone H3 peptide, ZINC ION
著者Hu, L, Li, Z, Wang, P, Lin, Y, Xu, Y.
登録日2011-06-16
公開日2011-08-24
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal structure of PHD domain of UHRF1 and insights into recognition of unmodified histone H3 arginine residue 2.
Cell Res., 2011
6AIJ
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BU of 6aij by Molmil
Cyclodextrin glycosyltransferase from Paenibacillus macerans mutant N603D
分子名称: CALCIUM ION, Cyclomaltodextrin glucanotransferase
著者Li, C.M, Ban, X.F, Li, Z.F, Li, Y.L, Cheng, S.D, Zhang, C.Y, Jin, T.C, Gu, Z.B.
登録日2018-08-24
公開日2018-10-10
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.096 Å)
主引用文献Cyclodextrin glycosyltransferase from Paenibacillus macerans mutant N603D
To Be Published
5TC1
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BU of 5tc1 by Molmil
In situ structures of the genome and genome-delivery apparatus in ssRNA bacteriophage MS2
分子名称: Capsid protein, Maturation protein, phage MS2 genome
著者Dai, X.H, Li, Z.H, Lai, M, Shu, S, Du, Y.S, Zhou, Z.H, Sun, R.
登録日2016-09-13
公開日2016-12-07
最終更新日2018-07-18
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献In situ structures of the genome and genome-delivery apparatus in a single-stranded RNA virus.
Nature, 541, 2017
6J8E
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BU of 6j8e by Molmil
Human Nav1.2-beta2-KIIIA ternary complex
分子名称: (3beta,14beta,17beta,25R)-3-[4-methoxy-3-(methoxymethyl)butoxy]spirost-5-en, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Pan, X, Li, Z, Huang, X, Huang, G, Yan, N.
登録日2019-01-18
公開日2019-02-27
最終更新日2020-07-29
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Molecular basis for pore blockade of human Na+channel Nav1.2 by the mu-conotoxin KIIIA.
Science, 363, 2019
7YPQ
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BU of 7ypq by Molmil
Cryo-EM structure of one baculovirus LEF-3 molecule in complex with ssDNA
分子名称: DNA (5'-D(P*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*A)-3'), Lef3
著者Fu, Y, Rao, G, Yin, J, Li, Z, Cao, S.
登録日2022-08-04
公開日2023-01-25
最終更新日2024-07-03
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Structural transitions during the cooperative assembly of baculovirus single-stranded DNA-binding protein on ssDNA.
Nucleic Acids Res., 50, 2022
4NM6
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BU of 4nm6 by Molmil
Crystal structure of TET2-DNA complex
分子名称: 5'-D(*AP*CP*CP*AP*CP*(5CM)P*GP*GP*TP*GP*GP*T)-3', FE (II) ION, Methylcytosine dioxygenase TET2, ...
著者Hu, L, Li, Z, Cheng, J, Rao, Q, Gong, W, Liu, M, Wang, P, Xu, Y.
登録日2013-11-14
公開日2013-12-18
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.026 Å)
主引用文献Crystal Structure of TET2-DNA Complex: Insight into TET-Mediated 5mC Oxidation.
Cell(Cambridge,Mass.), 155, 2013
7W8N
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BU of 7w8n by Molmil
Microbial Hormone-sensitive lipase E53 wild type
分子名称: (4-nitrophenyl) hexanoate, 1,2-ETHANEDIOL, 1,4-DIETHYLENE DIOXIDE, ...
著者Yang, X, Li, Z, Xu, X, Li, J.
登録日2021-12-08
公開日2022-02-23
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Mechanism and Structural Insights Into a Novel Esterase, E53, Isolated From Erythrobacter longus .
Front Microbiol, 12, 2021
6KL9
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BU of 6kl9 by Molmil
Structure of LbCas12a-crRNA complex bound to AcrVA4 (form A complex)
分子名称: AcrVA4, LbCas12a, MAGNESIUM ION, ...
著者Peng, R, Li, Z, Xu, Y, He, S, Peng, Q, Shi, Y, Gao, G.F.
登録日2019-07-30
公開日2019-09-11
最終更新日2024-10-09
実験手法ELECTRON MICROSCOPY (3.25 Å)
主引用文献Structural insight into multistage inhibition of CRISPR-Cas12a by AcrVA4.
Proc.Natl.Acad.Sci.USA, 116, 2019
8XMM
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BU of 8xmm by Molmil
Voltage-gated sodium channel Nav1.7 variant M9
分子名称: (2S,3R,4E)-2-(acetylamino)-3-hydroxyoctadec-4-en-1-yl dihydrogen phosphate, 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1-O-OCTADECYL-SN-GLYCERO-3-PHOSPHOCHOLINE, ...
著者Yan, N, Li, Z, Wu, Q, Huang, G.
登録日2023-12-27
公開日2024-03-06
最終更新日2024-10-09
実験手法ELECTRON MICROSCOPY (2.89 Å)
主引用文献Dissection of the structure-function relationship of Na v channels.
Proc.Natl.Acad.Sci.USA, 121, 2024
6DU8
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BU of 6du8 by Molmil
Human Polycsytin 2-l1
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Polycystic kidney disease 2-like 1 protein
著者Hulse, R.E, Clapham, D.E, Li, Z, Huang, R.K, Zhang, J.
登録日2018-06-20
公開日2018-07-25
最終更新日2020-07-29
実験手法ELECTRON MICROSCOPY (3.11 Å)
主引用文献Cryo-EM structure of the polycystin 2-l1 ion channel.
Elife, 7, 2018
8X91
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BU of 8x91 by Molmil
P/Q type calcium channel in complex with omega-conotoxin MVIIC
分子名称: 1,2-Distearoyl-sn-glycerophosphoethanolamine, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Yan, N, Li, Z, Cong, Y, Wu, T, Wang, T.
登録日2023-11-29
公開日2024-03-20
最終更新日2024-10-09
実験手法ELECTRON MICROSCOPY (3.11 Å)
主引用文献Structural basis for different omega-agatoxin IVA sensitivities of the P-type and Q-type Ca v 2.1 channels.
Cell Res., 34, 2024
8X90
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P/Q type calcium channel
分子名称: 1,2-DIDECANOYL-SN-GLYCERO-3-[PHOSPHO-L-SERINE], 1,2-Distearoyl-sn-glycerophosphoethanolamine, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Yan, N, Li, Z, Cong, Y, Wu, T, Wang, T.
登録日2023-11-29
公開日2024-03-20
最終更新日2024-10-09
実験手法ELECTRON MICROSCOPY (2.95 Å)
主引用文献Structural basis for different omega-agatoxin IVA sensitivities of the P-type and Q-type Ca v 2.1 channels.
Cell Res., 34, 2024
8X93
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P/Q type calcium channel in complex with omega-Agatoxin IVA
分子名称: 1,2-Distearoyl-sn-glycerophosphoethanolamine, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Yan, N, Li, Z, Cong, Y, Wu, T, Wang, T.
登録日2023-11-29
公開日2024-03-20
最終更新日2024-10-23
実験手法ELECTRON MICROSCOPY (2.92 Å)
主引用文献Structural basis for different omega-agatoxin IVA sensitivities of the P-type and Q-type Ca v 2.1 channels.
Cell Res., 34, 2024

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