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PDB: 923 件

7YNX
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Crystal structure of Pirh2 bound to poly-Ala peptide
分子名称: RING finger and CHY zinc finger domain-containing protein 1, SODIUM ION, SULFATE ION, ...
著者Dong, C, Yan, X, Li, Y.
登録日2022-08-01
公開日2023-04-26
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Recognition of an Ala-rich C-degron by the E3 ligase Pirh2.
Nat Commun, 14, 2023
4P7I
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Crystal structure of the Merlin FERM/DCAF1 complex
分子名称: GLYCEROL, Merlin, Protein VPRBP
著者Wei, Z, Li, Y, Zhang, M.
登録日2014-03-27
公開日2014-04-09
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structural basis of the binding of Merlin FERM domain to the E3 ubiquitin ligase substrate adaptor DCAF1.
J.Biol.Chem., 289, 2014
4PWY
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Crystal structure of a Calmodulin-lysine N-methyltransferase fragment
分子名称: Calmodulin-lysine N-methyltransferase, GLYCEROL, MALONATE ION, ...
著者Tempel, W, Hong, B.S, Walker, J.R, Li, Y, Bountra, C, Arrowsmith, C.H, Edwards, A.M, Brown, P.J, Structural Genomics Consortium (SGC)
登録日2014-03-21
公開日2014-04-16
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal structure of a Calmodulin-lysine N-methyltransferase fragment
TO BE PUBLISHED
5W2J
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Crystal structure of dimeric form of mouse Glutaminase C
分子名称: CHLORIDE ION, Glutaminase kidney isoform, mitochondrial, ...
著者Cerione, R.A, Li, Y.
登録日2017-06-06
公開日2018-10-17
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Mechanistic Basis of Glutaminase Activation: A KEY ENZYME THAT PROMOTES GLUTAMINE METABOLISM IN CANCER CELLS.
J. Biol. Chem., 291, 2016
1G9I
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CRYSTAL STRUCTURE OF BETA-TRYSIN COMPLEX IN CYCLOHEXANE
分子名称: BOWMAN-BIRK TYPE TRYPSIN INHIBITOR, CALCIUM ION, SULFATE ION, ...
著者Zhu, G, Huang, Q, Zhu, Y, Li, Y, Chi, C, Tang, Y.
登録日2000-11-24
公開日2000-12-06
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献X-Ray study on an artificial mung bean inhibitor complex with bovine beta-trypsin in neat cyclohexane.
Biochim.Biophys.Acta, 1546, 2001
6LZ2
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Crystal structure of a thermostable green fluorescent protein (TGP) with a synthetic nanobody (Sb44)
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ACETATE ION, GLYCEROL, ...
著者Cai, H, Yao, H, Li, T, Hutter, C, Tang, Y, Li, Y, Seeger, M, Li, D.
登録日2020-02-17
公開日2020-12-23
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.03 Å)
主引用文献An improved fluorescent tag and its nanobodies for membrane protein expression, stability assay, and purification.
Commun Biol, 3, 2020
7RUH
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BU of 7ruh by Molmil
Bromodomain-containing protein 4 (BRD4) bromodomain 2 (BD2) complexed with XR844
分子名称: Bromodomain-containing protein 4, N-{1-[1,1-di(pyridin-2-yl)ethyl]-6-(5-{[(2-fluorophenyl)carbamoyl]amino}-1-methyl-6-oxo-1,6-dihydropyridin-3-yl)-1H-indol-4-yl}-2,2,2-trifluoroethane-1-sulfonamide
著者Ratia, K.M, Xiong, R, Li, Y, Shen, Z, Zhao, J, Huang, F, Dubrovyskyii, O, Thatcher, G.R.
登録日2021-08-17
公開日2022-08-24
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Bromodomain-containing protein 4 (BRD4) bromodomain 2 (BD2) complexed with XR844
To Be Published
7RUI
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Bromodomain-containing protein 4 (BRD4) bromodomain 1 (BD1) complexed with XR844
分子名称: Bromodomain-containing protein 4, N-{1-[1,1-di(pyridin-2-yl)ethyl]-6-(5-{[(2-fluorophenyl)carbamoyl]amino}-1-methyl-6-oxo-1,6-dihydropyridin-3-yl)-1H-indol-4-yl}-2,2,2-trifluoroethane-1-sulfonamide
著者Ratia, K.M, Xiong, R, Li, Y, Shen, Z, Zhao, J, Huang, F, Dubrovyskyii, O, Thatcher, G.R.
登録日2021-08-17
公開日2022-08-24
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献Bromodomain-containing protein 4 (BRD4) bromodomain 1 (BD1) complexed with XR844
To Be Published
7CZ0
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BU of 7cz0 by Molmil
Crystal structure of a thermostable green fluorescent protein (TGP) with a synthetic nanobody (Sb92)
分子名称: ACETATE ION, CACODYLATE ION, CACODYLIC ACID, ...
著者Cai, H, Yao, H, Li, T, Hutter, C, Tang, Y, Li, Y, Seeger, M, Li, D.
登録日2020-09-06
公開日2021-09-08
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.77 Å)
主引用文献An improved fluorescent protein tag and its nanobodies for membrane protein expression, stability assay, and purification
To Be Published
5JYY
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BU of 5jyy by Molmil
Structure-based Tetravalent Zanamivir with Potent Inhibitory Activity against Drug-resistant Influenza Viruses
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 5-acetamido-2,6-anhydro-4-carbamimidamido-3,4,5-trideoxy-7-O-[(2-methoxyethyl)carbamoyl]-D-glycero-D-galacto-non-2-enon ic acid, CALCIUM ION, ...
著者Fu, L, Wu, Y, Bi, Y, Zhang, S, Lv, X, Qi, J, Li, Y, Lu, X, Yan, J, Gao, G.F, Li, X.
登録日2016-05-15
公開日2016-06-29
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structure-Based Tetravalent Zanamivir with Potent Inhibitory Activity against Drug-Resistant Influenza Viruses
J.Med.Chem., 59, 2016
1FV1
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BU of 1fv1 by Molmil
STRUCTURAL BASIS FOR THE BINDING OF AN IMMUNODOMINANT PEPTIDE FROM MYELIN BASIC PROTEIN IN DIFFERENT REGISTERS BY TWO HLA-DR2 ALLELES
分子名称: GLYCEROL, MAJOR HISTOCOMPATIBILITY COMPLEX ALPHA CHAIN, MAJOR HISTOCOMPATIBILITY COMPLEX BETA CHAIN, ...
著者Li, H, Mariuzza, A.R, Li, Y, Martin, R.
登録日2000-09-18
公開日2000-09-27
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structural basis for the binding of an immunodominant peptide from myelin basic protein in different registers by two HLA-DR2 proteins.
J.Mol.Biol., 304, 2000
8HZW
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BU of 8hzw by Molmil
The NMR structure of noursinH11W peptide
分子名称: noursinH11W
著者Yao, H, Li, Y, Zhang, T, Gao, J, Wang, H.
登録日2023-01-09
公開日2023-05-31
最終更新日2024-05-08
実験手法SOLUTION NMR
主引用文献Discovery and biosynthesis of tricyclic copper-binding ribosomal peptides containing histidine-to-butyrine crosslinks.
Nat Commun, 14, 2023
1EPT
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BU of 1ept by Molmil
REFINED 1.8 ANGSTROMS RESOLUTION CRYSTAL STRUCTURE OF PORCINE EPSILON-TRYPSIN
分子名称: CALCIUM ION, PORCINE E-TRYPSIN
著者Huang, Q, Wang, Z, Li, Y, Liu, S, Tang, Y.
登録日1994-06-07
公開日1995-02-07
最終更新日2024-06-05
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Refined 1.8 A resolution crystal structure of the porcine epsilon-trypsin.
Biochim.Biophys.Acta, 1209, 1994
1F2E
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STRUCTURE OF SPHINGOMONAD, GLUTATHIONE S-TRANSFERASE COMPLEXED WITH GLUTATHIONE
分子名称: GLUTATHIONE, GLUTATHIONE S-TRANSFERASE
著者Nishio, T, Watanabe, T, Patel, A, Wang, Y, Lau, P.C.K, Grochulski, P, Li, Y, Cygler, M.
登録日2000-05-24
公開日2000-06-21
最終更新日2011-12-21
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Properties of a Sphingomonad and Marine Bacterium Beta-Class Glutathione S-Transferases and Crystal Structure of the Former Complex with Glutathione
To be published
2AXJ
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BU of 2axj by Molmil
Crystal structures of T cell receptor beta chains related to rheumatoid arthritis
分子名称: SF4 T cell receptor beta chain
著者Li, H, Van Vranken, S, Zhao, Y, Li, Z, Guo, Y, Eisele, L, Li, Y.
登録日2005-09-05
公開日2005-09-20
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.65 Å)
主引用文献Crystal structures of T cell receptor (beta) chains related to rheumatoid arthritis.
Protein Sci., 14, 2005
2AXH
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Crystal structures of T cell receptor beta chains related to rheumatoid arthritis
分子名称: T cell receptor beta chain
著者Li, H, Van Vranken, S, Zhao, Y, Li, Z, Guo, Y, Eisele, L, Li, Y.
登録日2005-09-05
公開日2005-09-20
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Crystal structures of T cell receptor (beta) chains related to rheumatoid arthritis.
Protein Sci., 14, 2005
6LH4
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BU of 6lh4 by Molmil
Crystal structural of MacroD1-ADPr complex
分子名称: ADP-ribose glycohydrolase MACROD1, [(2R,3S,4R,5R)-5-(6-AMINOPURIN-9-YL)-3,4-DIHYDROXY-OXOLAN-2-YL]METHYL [HYDROXY-[[(2R,3S,4R,5S)-3,4,5-TRIHYDROXYOXOLAN-2-YL]METHOXY]PHOSPHORYL] HYDROGEN PHOSPHATE
著者Yang, X, Ma, Y, Li, Y.
登録日2019-12-06
公開日2020-12-09
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.999 Å)
主引用文献Molecular basis for the MacroD1-mediated hydrolysis of ADP-ribosylation.
DNA Repair (Amst), 94, 2020
4TMP
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BU of 4tmp by Molmil
Crystal structure of AF9 YEATS bound to H3K9ac peptide
分子名称: 1,2-ETHANEDIOL, ALA-ARG-THR-LYS-GLN-THR-ALA-ARG-ALY-SER-THR, Protein AF-9
著者Li, H, Li, Y, Wang, H, Ren, Y.
登録日2014-06-02
公開日2014-11-05
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献AF9 YEATS Domain Links Histone Acetylation to DOT1L-Mediated H3K79 Methylation.
Cell, 159, 2014
6LN4
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Estrogen-related receptor beta(ERR2) in complex with PGC1a-2a
分子名称: 10-mer from Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, Steroid hormone receptor ERR2
著者Yao, B.Q, Li, Y.
登録日2019-12-28
公開日2020-10-07
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.61 Å)
主引用文献Structural Insights into the Specificity of Ligand Binding and Coactivator Assembly by Estrogen-Related Receptor beta.
J.Mol.Biol., 432, 2020
8A9W
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Crystal structure of PulL C-ter domain
分子名称: SULFATE ION, Type II secretion system protein L
著者Dazzoni, R, Li, Y, Lopez-Castilla, A, Brier, S, Mechaly, A, Cordier, F, Haouz, A, Nilges, M, Francetic, O, Bardiaux, B, Izadi-Pruneyre, N.
登録日2022-06-29
公開日2023-01-11
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (1.895 Å)
主引用文献Structure and dynamic association of an assembly platform subcomplex of the bacterial type II secretion system.
Structure, 31, 2023
8A9X
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Crystal structure of PulM C-ter domain
分子名称: Type II secretion system protein M
著者Dazzoni, R, Li, Y, Lopez-Castilla, A, Brier, S, Mechaly, A, Cordier, F, Haouz, A, Nilges, M, Francetic, O, Bardiaux, B, Izadi-Pruneyre, N.
登録日2022-06-29
公開日2023-01-25
最終更新日2024-06-19
実験手法X-RAY DIFFRACTION (1.523 Å)
主引用文献Structure and dynamic association of an assembly platform subcomplex of the bacterial type II secretion system.
Structure, 31, 2023
8AS8
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E. coli Wadjet JetABC monomer
分子名称: ADENOSINE-5'-DIPHOSPHATE, JetA, JetB, ...
著者Roisne-Hamelin, F, Beckert, B, Li, Y, Myasnikov, A, Gruber, S.
登録日2022-08-18
公開日2022-12-14
最終更新日2022-12-28
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献DNA-measuring Wadjet SMC ATPases restrict smaller circular plasmids by DNA cleavage.
Mol.Cell, 82, 2022
8AB1
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Crystal structure of the PulL-PulM C-terminal domain heterocomplex
分子名称: Type II secretion system protein L, Type II secretion system protein M
著者Dazzoni, R, Li, Y, Lopez-Castilla, A, Brier, S, Mechaly, A, Cordier, F, Haouz, A, Nilges, M, Francetic, O, Bardiaux, B, Izadi-Pruneyre, N.
登録日2022-07-04
公開日2023-01-11
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (2.77 Å)
主引用文献Structure and dynamic association of an assembly platform subcomplex of the bacterial type II secretion system.
Structure, 31, 2023
5MSZ
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Lytic Polysaccharide Monooxygenase AA15 from Thermobia domestica in the Cu(I) State
分子名称: 1,2-ETHANEDIOL, COPPER (I) ION, Thermobia domestica domestica AA15
著者Hemsworth, G.R, Sabbadin, F, Ciano, L, Henrissat, B, Dupree, P, Tryfona, T, Besser, K, Elias, L, Pesante, G, Li, Y, Dowle, A, Bates, R, Gomez, L, Hallam, R, Davies, G.J, Walton, P.H, Bruce, N.C, McQueen-Mason, S.
登録日2017-01-06
公開日2018-02-28
最終更新日2018-03-07
実験手法X-RAY DIFFRACTION (1.1 Å)
主引用文献An ancient family of lytic polysaccharide monooxygenases with roles in arthropod development and biomass digestion.
Nat Commun, 9, 2018
8BFN
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E. coli Wadjet JetABC dimer of dimers
分子名称: ADENOSINE-5'-DIPHOSPHATE, JetA, JetB, ...
著者Roisne-Hamelin, F, Beckert, B, Myasnikov, A, Li, Y, Gruber, S.
登録日2022-10-26
公開日2022-12-14
最終更新日2022-12-28
実験手法ELECTRON MICROSCOPY (3.52 Å)
主引用文献DNA-measuring Wadjet SMC ATPases restrict smaller circular plasmids by DNA cleavage.
Mol.Cell, 82, 2022

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件を2024-07-17に公開中

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