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PDB: 667 results

3Q8T
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BU of 3q8t by Molmil
Crystal structure of the coiled coil domain of Beclin 1, an essential autophagy protein
Descriptor: Beclin-1
Authors:Li, X, Zhao, Y.
Deposit date:2011-01-07
Release date:2012-01-18
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Imperfect interface of Beclin1 coiled-coil domain regulates homodimer and heterodimer formation with Atg14L and UVRAG
Nat Commun, 3, 2012
3ID2
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BU of 3id2 by Molmil
Crystal Structure of RseP PDZ2 domain
Descriptor: IODIDE ION, Regulator of sigma E protease
Authors:Li, X, Wang, B, Feng, L, Wang, J, Shi, Y.
Deposit date:2009-07-20
Release date:2009-08-11
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (3.089 Å)
Cite:Cleavage of RseA by RseP requires a carboxyl-terminal hydrophobic amino acid following DegS cleavage
Proc.Natl.Acad.Sci.USA, 106, 2009
3ID4
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BU of 3id4 by Molmil
Crystal Structure of RseP PDZ2 domain fused GKASPV peptide
Descriptor: Regulator of sigma E protease
Authors:Li, X, Wang, B, Feng, L, Wang, J, Shi, Y.
Deposit date:2009-07-20
Release date:2009-08-11
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.604 Å)
Cite:Cleavage of RseA by RseP requires a carboxyl-terminal hydrophobic amino acid following DegS cleavage
Proc.Natl.Acad.Sci.USA, 106, 2009
3RQE
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BU of 3rqe by Molmil
Cerebral cavernous malformation 3 (CCM3) in complex with paxillin LD1
Descriptor: Paxillin LD1 peptide, Programmed cell death protein 10
Authors:Li, X, Zhang, R, Boggon, T.J.
Deposit date:2011-04-28
Release date:2011-06-01
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Molecular Recognition of Leucine-Aspartate Repeat (LD) Motifs by the Focal Adhesion Targeting Homology Domain of Cerebral Cavernous Malformation 3 (CCM3).
J.Biol.Chem., 286, 2011
3ID1
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BU of 3id1 by Molmil
Crystal Structure of RseP PDZ1 domain
Descriptor: Regulator of sigma E protease
Authors:Li, X, Wang, B, Feng, L, Wang, J, Shi, Y.
Deposit date:2009-07-20
Release date:2009-08-11
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.67 Å)
Cite:Cleavage of RseA by RseP requires a carboxyl-terminal hydrophobic amino acid following DegS cleavage
Proc.Natl.Acad.Sci.USA, 106, 2009
3ID3
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BU of 3id3 by Molmil
Crystal Structure of RseP PDZ2 I304A domain
Descriptor: Regulator of sigma E protease
Authors:Li, X, Wang, B, Feng, L, Wang, J, Shi, Y.
Deposit date:2009-07-20
Release date:2009-08-11
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:Cleavage of RseA by RseP requires a carboxyl-terminal hydrophobic amino acid following DegS cleavage
Proc.Natl.Acad.Sci.USA, 106, 2009
3RQF
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BU of 3rqf by Molmil
Cerebral cavernous malformation 3 (CCM3) in complex with paxillin LD2
Descriptor: Paxillin LD2 peptide, Programmed cell death protein 10
Authors:Li, X, Zhang, R, Boggon, T.J.
Deposit date:2011-04-28
Release date:2011-06-01
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Molecular Recognition of Leucine-Aspartate Repeat (LD) Motifs by the Focal Adhesion Targeting Homology Domain of Cerebral Cavernous Malformation 3 (CCM3).
J.Biol.Chem., 286, 2011
3J9I
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BU of 3j9i by Molmil
Thermoplasma acidophilum 20S proteasome
Descriptor: Proteasome subunit alpha, Proteasome subunit beta
Authors:Li, X, Mooney, P, Zheng, S, Booth, C, Braunfeld, M.B, Gubbens, S, Agard, D.A, Cheng, Y.
Deposit date:2015-02-02
Release date:2015-02-18
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Electron counting and beam-induced motion correction enable near-atomic-resolution single-particle cryo-EM.
Nat.Methods, 10, 2013
3SIP
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BU of 3sip by Molmil
Crystal structure of drICE and dIAP1-BIR1 complex
Descriptor: Apoptosis 1 inhibitor, Caspase, ZINC ION
Authors:Li, X, Wang, J, Shi, Y.
Deposit date:2011-06-20
Release date:2011-08-10
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (3.496 Å)
Cite:Structural mechanisms of DIAP1 auto-inhibition and DIAP1-mediated inhibition of drICE.
Nat Commun, 2, 2011
7WJQ
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BU of 7wjq by Molmil
Crystal structure of GSDMB in complex with Ipah7.8
Descriptor: Isoform 2 of Gasdermin-B, Probable E3 ubiquitin-protein ligase ipaH7.8
Authors:Li, X, Zhang, H, Yin, H.
Deposit date:2022-01-07
Release date:2023-01-11
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Insights into the GSDMB-mediated cellular lysis and its targeting by IpaH7.8
Nat Commun, 14, 2023
7N4X
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BU of 7n4x by Molmil
Structure of human NPC1L1 mutant-W347R
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CHOLESTEROL, ...
Authors:Li, X, Long, T.
Deposit date:2021-06-04
Release date:2021-09-01
Last modified:2022-03-16
Method:ELECTRON MICROSCOPY (3.33 Å)
Cite:Structures of dimeric human NPC1L1 provide insight into mechanisms for cholesterol absorption.
Sci Adv, 7, 2021
7N4U
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BU of 7n4u by Molmil
Structure of human NPC1L1
Descriptor: (2R)-2,5,7,8-TETRAMETHYL-2-[(4R,8R)-4,8,12-TRIMETHYLTRIDECYL]CHROMAN-6-OL, (2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Li, X, Long, T.
Deposit date:2021-06-04
Release date:2021-09-01
Last modified:2022-03-16
Method:ELECTRON MICROSCOPY (3.34 Å)
Cite:Structures of dimeric human NPC1L1 provide insight into mechanisms for cholesterol absorption.
Sci Adv, 7, 2021
7N4V
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BU of 7n4v by Molmil
Structure of cholesterol-bound human NPC1L1
Descriptor: (2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Li, X, Long, T.
Deposit date:2021-06-04
Release date:2021-09-01
Last modified:2022-03-16
Method:ELECTRON MICROSCOPY (3.58 Å)
Cite:Structures of dimeric human NPC1L1 provide insight into mechanisms for cholesterol absorption.
Sci Adv, 7, 2021
3L8J
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BU of 3l8j by Molmil
Crystal structure of CCM3, a cerebral cavernous malformation protein critical for vascular integrity
Descriptor: Programmed cell death protein 10
Authors:Li, X, Zhang, R, Zhang, H, He, Y, Ji, W, Min, W, Boggon, T.J.
Deposit date:2009-12-31
Release date:2010-05-19
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (3.05 Å)
Cite:Crystal structure of CCM3, a cerebral cavernous malformation protein critical for vascular integrity.
J.Biol.Chem., 285, 2010
3L8I
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BU of 3l8i by Molmil
Crystal structure of CCM3, a cerebral cavernous malformation protein critical for vascular integrity
Descriptor: Programmed cell death protein 10
Authors:Li, X, Zhang, R, Zhang, H, He, Y, Ji, W, Min, W, Boggon, T.J.
Deposit date:2009-12-31
Release date:2010-05-19
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of CCM3, a cerebral cavernous malformation protein critical for vascular integrity.
J.Biol.Chem., 285, 2010
7N6R
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BU of 7n6r by Molmil
Structure of nevanimibe bound human ACAT2
Descriptor: CHOLESTEROL, OLEIC ACID, Sterol O-acyltransferase 2, ...
Authors:Li, X, Long, T.
Deposit date:2021-06-08
Release date:2021-09-15
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (3.93 Å)
Cite:Structure of nevanimibe bound human ACAT2
To Be Published
7N6Q
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BU of 7n6q by Molmil
Structure of PPPA bound human ACAT2
Descriptor: (3S,4R,4aR,6S,6aS,12R,12aS,12bS)-4-[(acetyloxy)methyl]-12-hydroxy-4,6a,12b-trimethyl-11-oxo-9-(pyridin-3-yl)-1,3,4,4a,5,6,6a,12,12a,12b-decahydro-2H,11H-naphtho[2,1-b]pyrano[3,4-e]pyran-3,6-diyl diacetate, CHOLESTEROL, OLEIC ACID, ...
Authors:Li, X, Long, T.
Deposit date:2021-06-08
Release date:2021-09-22
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (3.87 Å)
Cite:Structure of PPPA bound human ACAT2
To Be Published
3RQG
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BU of 3rqg by Molmil
Cerebral cavernous malformation 3 (CCM3) in complex with paxillin LD4
Descriptor: Paxillin LD4 peptide, Programmed cell death protein 10
Authors:Li, X, Zhang, R, Boggon, T.J.
Deposit date:2011-04-28
Release date:2011-06-01
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Molecular Recognition of Leucine-Aspartate Repeat (LD) Motifs by the Focal Adhesion Targeting Homology Domain of Cerebral Cavernous Malformation 3 (CCM3).
J.Biol.Chem., 286, 2011
5X5S
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BU of 5x5s by Molmil
Ligand induced structure of AmyP-SBD
Descriptor: Amylase
Authors:Li, X, Yu, J, Sun, H, Zhang, X.
Deposit date:2017-02-17
Release date:2017-04-05
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Ligand binding induced folding of a novel CBM69 starch binding domain
To Be Published
3SIQ
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BU of 3siq by Molmil
Crystal Structure of autoinhibited dIAP1-BIR1 domain
Descriptor: Apoptosis 1 inhibitor, ZINC ION
Authors:Li, X, Wang, J, Shi, Y.
Deposit date:2011-06-20
Release date:2011-08-10
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural mechanisms of DIAP1 auto-inhibition and DIAP1-mediated inhibition of drICE.
Nat Commun, 2, 2011
3SIR
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BU of 3sir by Molmil
Crystal Structure of drICE
Descriptor: Caspase
Authors:Li, X, Wang, J, Shi, Y.
Deposit date:2011-06-20
Release date:2011-08-10
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.68 Å)
Cite:Structural mechanisms of DIAP1 auto-inhibition and DIAP1-mediated inhibition of drICE.
Nat Commun, 2, 2011
3UR1
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BU of 3ur1 by Molmil
The structure of a ternary complex between CheA domains P4 and P5 with CheW and with a truncated fragment of TM14, a chemoreceptor analog from Thermotoga maritima.
Descriptor: Chemotaxis protein CheA, Chemotaxis protein CheW, Methyl-accepting chemotaxis protein
Authors:Li, X, Crane, B.R, Bilwes, A.M.
Deposit date:2011-11-21
Release date:2012-03-07
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (4.5 Å)
Cite:The structure of native bacterial chemoreceptor arrays
Proc.Natl.Acad.Sci.USA, 2012
7EQH
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BU of 7eqh by Molmil
Crystal structure of Arabidopsis GUN2/HO1 in complex with heme
Descriptor: Heme oxygenase 1, chloroplastic, PROTOPORPHYRIN IX CONTAINING FE
Authors:Li, X, Wang, J, Liu, L.
Deposit date:2021-05-02
Release date:2022-05-11
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Enzymological and structural characterization of Arabidopsis thaliana heme oxygenase-1.
Febs Open Bio, 12, 2022
4QRD
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BU of 4qrd by Molmil
Structure of Methionyl-tRNA Synthetase in complex with N-(1H-benzimidazol-2-ylmethyl)-N'-(2,4-dichlorophenyl)-6-(morpholin-4-yl)-1,3,5-triazine-2,4-diamine
Descriptor: MAGNESIUM ION, Methionyl-tRNA synthetase, N-(1H-benzimidazol-2-ylmethyl)-N'-(2,4-dichlorophenyl)-6-(morpholin-4-yl)-1,3,5-triazine-2,4-diamine
Authors:Li, X, Hilgers, M.T, Stidham, M, Brown-Driver, V, Shaw, K.J, Finn, J.
Deposit date:2014-06-30
Release date:2015-07-29
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:Discovery and SAR of a Novel Series of Pyrimidine Antibacterials Targeting Methionyl-tRNA Synthetase
to be published
4QUV
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BU of 4quv by Molmil
Structure of an integral membrane delta(14)-sterol reductase
Descriptor: Delta(14)-sterol reductase, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Li, X, Blobel, G.
Deposit date:2014-07-12
Release date:2014-10-08
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.743 Å)
Cite:Structure of an integral membrane sterol reductase from Methylomicrobium alcaliphilum.
Nature, 517, 2015

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PDB entries from 2024-10-16

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