Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 373 件

5YWZ
DownloadVisualize
BU of 5ywz by Molmil
AID-SUN tandem of SUN1
分子名称: SUN domain-containing protein 1
著者Xu, Y, Li, W, Feng, W.
登録日2017-11-30
公開日2018-02-21
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural conservation of the autoinhibitory domain in SUN proteins
Biochem. Biophys. Res. Commun., 496, 2018
3SWH
DownloadVisualize
BU of 3swh by Molmil
Munc13-1, MUN domain, C-terminal module
分子名称: Protein unc-13 homolog A
著者Tomchick, D.R, Rizo, J, Li, W.
登録日2011-07-13
公開日2011-11-02
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.65 Å)
主引用文献The Crystal Structure of a Munc13 C-terminal Module Exhibits a Remarkable Similarity to Vesicle Tethering Factors.
Structure, 19, 2011
2IBM
DownloadVisualize
BU of 2ibm by Molmil
A novel dimer interface and conformational changes revealed by an X-ray structure of B. subtilis SecA
分子名称: ADENOSINE-5'-DIPHOSPHATE, Preprotein translocase secA subunit
著者Zimmer, J, Li, W, Rapoport, T.A.
登録日2006-09-11
公開日2006-11-14
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献A Novel Dimer Interface and Conformational Changes Revealed by an X-ray Structure of B. subtilis SecA.
J.Mol.Biol., 364, 2006
3UA0
DownloadVisualize
BU of 3ua0 by Molmil
N-Terminal Domain of Bombyx mori Fibroin Mediates the Assembly of Silk in Response to pH Decrease
分子名称: Fibroin heavy chain
著者He, Y.-X, Zhang, N.-N, Chen, B.-Y, Li, W.-F, Chen, Y.-X, Zhou, C.-Z.
登録日2011-10-20
公開日2012-03-28
最終更新日2018-01-24
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献N-Terminal Domain of Bombyx mori Fibroin Mediates the Assembly of Silk in Response to pH Decrease.
J.Mol.Biol., 418, 2012
8ILR
DownloadVisualize
BU of 8ilr by Molmil
Cryo-EM structure of PI3Kalpha in complex with compound 16
分子名称: N-[(2S)-1-(ethylamino)-1-oxidanylidene-3-[4-(2-quinoxalin-6-ylethynyl)phenyl]propan-2-yl]-2,3-dimethyl-quinoxaline-6-carboxamide, Phosphatidylinositol 3-kinase regulatory subunit alpha, Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit alpha isoform
著者Zhou, Q, Liu, X, Neri, D, Li, W, Favalli, N, Bassi, G, Yang, S, Yang, D, Vogt, P.K, Wang, M.-W.
登録日2023-03-04
公開日2023-08-30
実験手法ELECTRON MICROSCOPY (3.05 Å)
主引用文献Structural insights into the interaction of three Y-shaped ligands with PI3K alpha.
Proc.Natl.Acad.Sci.USA, 120, 2023
8ILS
DownloadVisualize
BU of 8ils by Molmil
Cryo-EM structure of PI3Kalpha in complex with compound 17
分子名称: N-[(2R)-1-(ethylamino)-1-oxidanylidene-3-[4-(2-quinoxalin-6-ylethynyl)phenyl]propan-2-yl]-2,3-dimethyl-quinoxaline-6-carboxamide, Phosphatidylinositol 3-kinase regulatory subunit alpha, Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit alpha isoform
著者Zhou, Q, Liu, X, Neri, D, Li, W, Favalli, N, Bassi, G, Yang, S, Yang, D, Vogt, P.K, Wang, M.-W.
登録日2023-03-04
公開日2023-09-13
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Structural insights into the interaction of three Y-shaped ligands with PI3K alpha.
Proc.Natl.Acad.Sci.USA, 120, 2023
4NV2
DownloadVisualize
BU of 4nv2 by Molmil
C50A mutant of Synechococcus VKOR, C2221 crystal form
分子名称: UBIQUINONE-10, VKORC1/thioredoxin domain protein
著者Liu, S, Cheng, W, Fowle Grider, R, Shen, G, Li, W.
登録日2013-12-04
公開日2014-02-12
実験手法X-RAY DIFFRACTION (3.61 Å)
主引用文献Structures of an intramembrane vitamin K epoxide reductase homolog reveal control mechanisms for electron transfer.
Nat Commun, 5, 2014
4NV6
DownloadVisualize
BU of 4nv6 by Molmil
C212A mutant of Synechococcus VKOR
分子名称: UBIQUINONE-10, VKORC1/thioredoxin domain protein
著者Liu, S, Cheng, W, Fowle Grider, R, Shen, G, Li, W.
登録日2013-12-04
公開日2014-02-12
実験手法X-RAY DIFFRACTION (4.19 Å)
主引用文献Structures of an intramembrane vitamin K epoxide reductase homolog reveal control mechanisms for electron transfer.
Nat Commun, 5, 2014
8J0Q
DownloadVisualize
BU of 8j0q by Molmil
Structure of DNA binding domain of human TFAP2B
分子名称: GLYCEROL, Transcription factor AP-2-beta
著者Liu, K, Xiao, Y.Q, Li, W.F, Min, J.R.
登録日2023-04-11
公開日2023-07-05
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structural basis for specific DNA sequence motif recognition by the TFAP2 transcription factors.
Nucleic Acids Res., 51, 2023
8J0R
DownloadVisualize
BU of 8j0r by Molmil
Structure of human TFAP2A in complex with DNA
分子名称: DI(HYDROXYETHYL)ETHER, DNA (5'-D(*CP*TP*GP*CP*CP*TP*CP*AP*GP*GP*CP*AP*C)-3'), DNA (5'-D(*GP*TP*GP*CP*CP*TP*GP*AP*GP*GP*CP*AP*G)-3'), ...
著者Liu, K, Xiao, Y.Q, Li, W.F, Min, J.R.
登録日2023-04-11
公開日2023-07-05
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structural basis for specific DNA sequence motif recognition by the TFAP2 transcription factors.
Nucleic Acids Res., 51, 2023
6BFU
DownloadVisualize
BU of 6bfu by Molmil
Glycan shield and fusion activation of a deltacoronavirus spike glycoprotein fine-tuned for enteric infections
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike protein, ...
著者Xiong, X, Tortorici, M.A, Snijder, S, Yoshioka, C, Walls, A.C, Li, W, Seattle Structural Genomics Center for Infectious Disease (SSGCID), McGuire, A.T, Rey, F.A, Bosch, B.J, Veesler, D.
登録日2017-10-27
公開日2017-11-22
最終更新日2020-07-29
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Glycan Shield and Fusion Activation of a Deltacoronavirus Spike Glycoprotein Fine-Tuned for Enteric Infections.
J. Virol., 92, 2018
4L16
DownloadVisualize
BU of 4l16 by Molmil
Crystal structure of FIGL-1 AAA domain in complex with ADP
分子名称: ADENOSINE-5'-DIPHOSPHATE, Fidgetin-like protein 1
著者Peng, W, Lin, Z, Li, W, Lu, J, Shen, Y, Wang, C.
登録日2013-06-02
公開日2013-09-04
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structural insights into the unusually strong ATPase activity of the AAA domain of the Caenorhabditis elegans fidgetin-like 1 (FIGL-1) protein.
J.Biol.Chem., 288, 2013
4L15
DownloadVisualize
BU of 4l15 by Molmil
Crystal structure of FIGL-1 AAA domain
分子名称: Fidgetin-like protein 1, TRIS(HYDROXYETHYL)AMINOMETHANE
著者Peng, W, Lin, Z, Li, W, Lu, J, Shen, Y, Wang, C.
登録日2013-06-02
公開日2013-09-04
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structural insights into the unusually strong ATPase activity of the AAA domain of the Caenorhabditis elegans fidgetin-like 1 (FIGL-1) protein.
J.Biol.Chem., 288, 2013
4QAU
DownloadVisualize
BU of 4qau by Molmil
Crystal structure of F43Y mutant of sperm whale myoglobin
分子名称: Myoglobin, PROTOPORPHYRIN IX CONTAINING FE
著者Lin, Y, Tan, X, Li, W.
登録日2014-05-06
公開日2015-01-21
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.597 Å)
主引用文献A Novel Tyrosine-Heme C-O Covalent Linkage in F43Y Myoglobin: A New Post-translational Modification of Heme Proteins
Chembiochem, 16, 2015
8K4L
DownloadVisualize
BU of 8k4l by Molmil
Crystal structure of NRF1 homodimer in complex with DNA
分子名称: DNA (14-MER), GLYCEROL, Nuclear respiratory factor 1
著者Liu, K, Li, W.F, Min, J.R.
登録日2023-07-19
公開日2023-12-06
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Molecular mechanism of specific DNA sequence recognition by NRF1.
Nucleic Acids Res., 52, 2024
4NV5
DownloadVisualize
BU of 4nv5 by Molmil
C50A mutant of Synechococcus VKOR, C2 crystal form (dehydrated)
分子名称: UBIQUINONE-10, VKORC1/thioredoxin domain protein
著者Liu, S, Cheng, W, Fowle Grider, R, Shen, G, Li, W.
登録日2013-12-04
公開日2014-02-12
実験手法X-RAY DIFFRACTION (2.79 Å)
主引用文献Structures of an intramembrane vitamin K epoxide reductase homolog reveal control mechanisms for electron transfer.
Nat Commun, 5, 2014
8ILV
DownloadVisualize
BU of 8ilv by Molmil
Cryo-EM structure of PI3Kalpha in complex with compound 18
分子名称: N-[(2R)-1-(ethylamino)-1-oxidanylidene-3-[3-(2-quinoxalin-6-ylethynyl)phenyl]propan-2-yl]-2,3-dimethyl-quinoxaline-6-carboxamide, Phosphatidylinositol 3-kinase regulatory subunit alpha, Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit alpha isoform
著者Zhou, Q, Liu, X, Neri, D, Li, W, Favalli, N, Bassi, G, Yang, S, Yang, D, Vogt, P.K, Wang, M.-W.
登録日2023-03-04
公開日2023-09-06
実験手法ELECTRON MICROSCOPY (3.19 Å)
主引用文献Structural insights into the interaction of three Y-shaped ligands with PI3K alpha.
Proc.Natl.Acad.Sci.USA, 120, 2023
3EQ4
DownloadVisualize
BU of 3eq4 by Molmil
Model of tRNA(Leu)-EF-Tu in the ribosomal pre-accommodated state revealed by cryo-EM
分子名称: 30S ribosomal protein S12, 50S ribosomal protein L11, Elongation factor Tu, ...
著者Frank, J, Li, W, Agirrezabala, X.
登録日2008-09-30
公開日2008-12-16
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (12 Å)
主引用文献Recognition of aminoacyl-tRNA: a common molecular mechanism revealed by cryo-EM.
Embo J., 27, 2008
3EQ3
DownloadVisualize
BU of 3eq3 by Molmil
Model of tRNA(Trp)-EF-Tu in the ribosomal pre-accommodated state revealed by cryo-EM
分子名称: 30S ribosomal protein S12, 50S ribosomal protein L11, Elongation factor Tu, ...
著者Frank, J, Li, W, Agirrezabala, X.
登録日2008-09-30
公開日2008-12-16
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (9 Å)
主引用文献Recognition of aminoacyl-tRNA: a common molecular mechanism revealed by cryo-EM.
Embo J., 27, 2008
3HIA
DownloadVisualize
BU of 3hia by Molmil
Crystal structure of the choline binding domain of Spr1274 in Streptococcus pneumoniae
分子名称: Choline binding protein, PHOSPHOCHOLINE, SULFATE ION
著者Zhang, Z.-Y, Li, W.-Z, Jiang, Y.-L, Bao, R, Zhou, C.-Z, Chen, Y.-X.
登録日2009-05-19
公開日2009-08-04
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.38 Å)
主引用文献Crystal structure of the choline binding domain of Spr1274 in Streptococcus pneumoniae
To be Published
4IJC
DownloadVisualize
BU of 4ijc by Molmil
Crystal structure of arabinose dehydrogenase Ara1 from Saccharomyces cerevisiae
分子名称: D-arabinose dehydrogenase [NAD(P)+] heavy chain, GLYCEROL, SULFATE ION
著者Hu, X.Q, Guo, P.C, Li, W.F, Zhou, C.Z.
登録日2012-12-21
公開日2013-11-27
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structures of Saccharomyces cerevisiaeD-arabinose dehydrogenase Ara1 and its complex with NADPH: implications for cofactor-assisted substrate recognition
Acta Crystallogr.,Sect.F, 69, 2013
4IJR
DownloadVisualize
BU of 4ijr by Molmil
Crystal structure of Saccharomyces cerevisiae arabinose dehydrogenase Ara1 complexed with NADPH
分子名称: D-arabinose dehydrogenase [NAD(P)+] heavy chain, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
著者Hu, X.Q, Guo, P.C, Li, W.F, Zhou, C.Z.
登録日2012-12-23
公開日2013-11-27
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structures of Saccharomyces cerevisiaeD-arabinose dehydrogenase Ara1 and its complex with NADPH: implications for cofactor-assisted substrate recognition
Acta Crystallogr.,Sect.F, 69, 2013
5XHC
DownloadVisualize
BU of 5xhc by Molmil
Crystal structure of T2R-TTL-PO10 complex
分子名称: (3Z,6Z)-3-[(4-tert-butyl-1H-imidazol-5-yl)methylidene]-6-[[3-(4-fluorophenyl)carbonylphenyl]methylidene]piperazine-2,5-dione, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CALCIUM ION, ...
著者Chu, Y, Wang, Y, Yang, J, Li, W.
登録日2017-04-20
公開日2017-10-18
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.75 Å)
主引用文献Synthesis, biological evaluation and X-ray structure of anti-microtubule agents
To Be Published
5XI5
DownloadVisualize
BU of 5xi5 by Molmil
Crystal structure of T2R-TTL-PO5 complex
分子名称: (3Z,6Z)-3-benzylidene-6-[(5-tert-butyl-1H-imidazol-4-yl)methylidene]piperazine-2,5-dione, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CALCIUM ION, ...
著者Chu, Y, Wang, Y, Yang, J, Li, W.
登録日2017-04-26
公開日2017-10-18
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.81 Å)
主引用文献Synthesis, biological evaluation and X-ray structure of anti-microtubule agents
To Be Published
4DY0
DownloadVisualize
BU of 4dy0 by Molmil
Crystal structure of native protease nexin-1 with heparin
分子名称: 2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranose-(1-4)-2-O-sulfo-alpha-L-idopyranuronic acid, GLYCEROL, Glia-derived nexin, ...
著者Huntington, J.A, Li, W.
登録日2012-02-28
公開日2012-08-15
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Crystal structures of protease nexin-1 in complex with heparin and thrombin suggest a 2-step recognition mechanism.
Blood, 120, 2012

221051

件を2024-06-12に公開中

PDB statisticsPDBj update infoContact PDBjnumon