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PDB: 582 results

7UEB
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BU of 7ueb by Molmil
Photosynthetic assembly of Chlorobaculum tepidum (RC-FMO2)
Descriptor: 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE, 2-[(1E,3E,5E,7E,9E,11E,13E,15E,17E,19E)-3,7,12,16,20,24-hexamethylpentacosa-1,3,5,7,9,11,13,15,17,19,23-undecaenyl]-1,3,4-trimethyl-benzene, ...
Authors:Puskar, R, Truong, C.D, Swain, K, Li, S, Cheng, K.-W, Wang, T.Y, Poh, Y.-P, Liu, H, Chou, T.-F, Nannenga, B, Chiu, P.-L.
Deposit date:2022-03-21
Release date:2022-10-05
Last modified:2022-10-19
Method:ELECTRON MICROSCOPY (3.08 Å)
Cite:Molecular asymmetry of a photosynthetic supercomplex from green sulfur bacteria.
Nat Commun, 13, 2022
7UU5
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BU of 7uu5 by Molmil
Crystal structure of APOBEC3G complex with 5'-Overhang dsRNA
Descriptor: DNA dC->dU-editing enzyme APOBEC-3G, RNA (5'-R(P*UP*AP*AP*CP*CP*GP*CP*AP*GP*CP*G)-3'), RNA (5'-R(P*UP*AP*AP*CP*GP*CP*UP*GP*CP*GP*G)-3'), ...
Authors:Yang, H, Li, S, Chen, X.S.
Deposit date:2022-04-28
Release date:2023-01-11
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structural basis of sequence-specific RNA recognition by the antiviral factor APOBEC3G.
Nat Commun, 13, 2022
7UU4
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BU of 7uu4 by Molmil
Crystal structure of APOBEC3G complex with ssRNA
Descriptor: DNA dC->dU-editing enzyme APOBEC-3G, RNA (5'-R(P*UP*AP*AP*UP*UP*U)-3'), SULFATE ION, ...
Authors:Yang, H, Li, S, Chen, X.S.
Deposit date:2022-04-28
Release date:2023-01-11
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural basis of sequence-specific RNA recognition by the antiviral factor APOBEC3G.
Nat Commun, 13, 2022
7UU3
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BU of 7uu3 by Molmil
Crystal structure of APOBEC3G complex with 3'overhangs RNA-Complex
Descriptor: DNA dC->dU-editing enzyme APOBEC-3G, RNA (5'-R(*CP*CP*CP*AP*CP*GP*GP*GP*AP*AP*U)-3'), RNA (5'-R(*CP*CP*CP*GP*UP*GP*GP*GP*AP*AP*U)-3'), ...
Authors:Yang, H, Li, S, Chen, X.S.
Deposit date:2022-04-28
Release date:2023-01-11
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (3.099 Å)
Cite:Structural basis of sequence-specific RNA recognition by the antiviral factor APOBEC3G.
Nat Commun, 13, 2022
7VF5
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BU of 7vf5 by Molmil
Human m6A-METTL associated complex (WTAP, VIRMA, and HAKAI)
Descriptor: Pre-mRNA-splicing regulator WTAP, Protein virilizer homolog
Authors:Su, S, Li, S, Deng, T, Gao, M, Yin, Y, Wu, B, Peng, C, Liu, J, Ma, J, Zhang, K.
Deposit date:2021-09-10
Release date:2022-09-14
Last modified:2022-12-21
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Cryo-EM structures of human m6A writer complexes.
Cell Res., 32, 2022
7VF2
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BU of 7vf2 by Molmil
Human m6A-METTL associated complex (WTAP, VIRMA, ZC3H13, and HAKAI)
Descriptor: Pre-mRNA-splicing regulator WTAP, Protein virilizer homolog, Zinc finger CCCH domain-containing protein 13
Authors:Su, S, Li, S, Deng, T, Gao, M, Yin, Y, Wu, B, Peng, C, Liu, J, Ma, J, Zhang, K.
Deposit date:2021-09-10
Release date:2022-09-14
Last modified:2022-12-21
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Cryo-EM structures of human m6A writer complexes.
Cell Res., 32, 2022
1ROW
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BU of 1row by Molmil
Structure of SSP-19, an MSP-domain protein like family member in Caenorhabditis elegans
Descriptor: MSP-domain protein like family member
Authors:Schormann, N, Symersky, J, Carson, M, Luo, M, Lin, G, Li, S, Qiu, S, Arabashi, A, Bunzel, B, Luo, D, Nagy, L, Gray, R, Luan, C.-H, Zhang, J, Lu, S, DeLucas, L, Southeast Collaboratory for Structural Genomics (SECSG)
Deposit date:2003-12-02
Release date:2003-12-23
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure of sperm-specific protein SSP-19 from Caenorhabditis elegans.
Acta Crystallogr.,Sect.D, 60, 2004
7CJQ
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BU of 7cjq by Molmil
Structure of DLA-88*001:04
Descriptor: ARG-THR-ILE-SER-TYR-THR-TYR-PRO-PHE, Beta-2-microglobulin, MHC class I DLA-88
Authors:Sun, Y.J, Ma, L.Z, Li, S.
Deposit date:2020-07-12
Release date:2020-08-26
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structure of canine MHC class I at 2.7 Angstroms resolution
To Be Published
7CZB
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BU of 7czb by Molmil
The cryo-EM structure of the ERAD retrotranslocation channel formed by human Derlin-1
Descriptor: Derlin-1
Authors:Rao, B, Li, S, Yao, D, Wang, Q, Xia, Y, Jia, Y, Shen, Y, Cao, Y.
Deposit date:2020-09-07
Release date:2021-03-17
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:The cryo-EM structure of an ERAD protein channel formed by tetrameric human Derlin-1.
Sci Adv, 7, 2021
7DPF
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BU of 7dpf by Molmil
Cryo-EM structure of Coxsackievirus B1 mature virion
Descriptor: Capsid protein VP4, PALMITIC ACID, VP2, ...
Authors:Zheng, Q, Li, S.
Deposit date:2020-12-18
Release date:2021-05-05
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Cryo-EM structures reveal the molecular basis of receptor-initiated coxsackievirus uncoating.
Cell Host Microbe, 29, 2021
7EWT
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BU of 7ewt by Molmil
The crystal structure of Lysophospholipid acyltransferase LPCAT3 (MOBAT5) in its monomeric and apo form
Descriptor: Lysophospholipid acyltransferase 5
Authors:Zhang, Q, Yao, D, Rao, B, Li, S, Jian, L, Chen, Y, Hu, K, Xia, Y, Cao, Y.
Deposit date:2021-05-26
Release date:2021-12-01
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:The structural basis for the phospholipid remodeling by lysophosphatidylcholine acyltransferase 3.
Nat Commun, 12, 2021
7F3X
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BU of 7f3x by Molmil
Lysophospholipid acyltransferase LPCAT3 in complex with lysophosphatidylcholine
Descriptor: LPCAT3, [2-((1-OXODODECANOXY-(2-HYDROXY-3-PROPANYL))-PHOSPHONATE-OXY)-ETHYL]-TRIMETHYLAMMONIUM
Authors:Zhang, Q, Yao, D, Rao, B, Li, S, Jian, L, Chen, Y, Hu, K, Xia, Y, Shen, Y, Cao, Y.
Deposit date:2021-06-17
Release date:2021-12-01
Last modified:2022-02-23
Method:ELECTRON MICROSCOPY (3.57 Å)
Cite:The structural basis for the phospholipid remodeling by lysophosphatidylcholine acyltransferase 3.
Nat Commun, 12, 2021
7F8I
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BU of 7f8i by Molmil
Crystal structure of HPV6 L1 pentamer
Descriptor: Major capsid protein L1
Authors:Wang, Z.P, Wang, D.N, Gu, Y, Li, S.W.
Deposit date:2021-07-02
Release date:2022-07-06
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3.366 Å)
Cite:Crystal structure of HPV6 L1 pentamer
To Be Published
7FBI
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BU of 7fbi by Molmil
Cryo-EM structure of EBV gB in complex with nAbs 3A3 and 3A5
Descriptor: 3A3 heavy chain, 3A3 light chain, 3A5 heavy chain, ...
Authors:Zheng, Q, Li, S, Zha, Z, Hong, J, Chen, Y, Zhang, X.
Deposit date:2021-07-10
Release date:2022-07-13
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Cryo-EM structure of EBV gB in complex with nAbs 3A3 and 3A5
To Be Published
6K2I
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BU of 6k2i by Molmil
Solution structure of camelid nanobody Nb11 against aflatoxin B1
Descriptor: camelid nanobody Nb11
Authors:Nie, Y, Li, S.L, He, T, Zhu, J, Yang, Y.H.
Deposit date:2019-05-14
Release date:2019-06-05
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Solution structure of camelid nanobody Nb11 against aflatoxin B1
To Be Published
6LK5
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BU of 6lk5 by Molmil
MLKL mutant - T357ES358D
Descriptor: Mixed lineage kinase domain-like protein
Authors:Wang, H.Y, Li, S, Zhang, Y.
Deposit date:2019-12-18
Release date:2020-12-23
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:The MLKL kinase-like domain dimerization is an indispensable step of mammalian MLKL activation in necroptosis signaling.
Cell Death Dis, 12, 2021
6LK6
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BU of 6lk6 by Molmil
MLKL mutant - T357AS358A
Descriptor: Mixed lineage kinase domain-like protein
Authors:Wang, H, Li, S, Zhang, Y.
Deposit date:2019-12-18
Release date:2020-12-23
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.41 Å)
Cite:The MLKL kinase-like domain dimerization is an indispensable step of mammalian MLKL activation in necroptosis signaling.
Cell Death Dis, 12, 2021
6NUD
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BU of 6nud by Molmil
Small conformation of ssRNA-bound CRISPR_Csm complex
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, CRISPR system Cms protein Csm2, CRISPR system single-strand-specific deoxyribonuclease Cas10/Csm1 (subtype III-A), ...
Authors:Zhang, K, Pintilie, G, Li, S, Zhu, Y, Chiu, W, Huang, Z.
Deposit date:2019-01-31
Release date:2019-03-13
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Coupling of ssRNA cleavage with DNase activity in type III-A CRISPR-Csm revealed by cryo-EM and biochemistry.
Cell Res., 29, 2019
6NUE
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BU of 6nue by Molmil
Small conformation of apo CRISPR_Csm complex
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, CRISPR system Cms protein Csm2, CRISPR system single-strand-specific deoxyribonuclease Cas10/Csm1 (subtype III-A), ...
Authors:Zhang, K, Pintilie, G, Li, S, Zhu, Y, Chiu, W, Huang, Z.
Deposit date:2019-01-31
Release date:2019-03-13
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Coupling of ssRNA cleavage with DNase activity in type III-A CRISPR-Csm revealed by cryo-EM and biochemistry.
Cell Res., 29, 2019
6JIP
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BU of 6jip by Molmil
Crystal structure of Streptococcus pneumoniae SP_0782 (residues 7-79) in complex with single-stranded DNA dT6
Descriptor: DNA (5'-D(*TP*TP*TP*TP*T)-3'), PENTAETHYLENE GLYCOL, SP_0782
Authors:Fang, X, Lu, G, Li, S, Zhu, J, Yang, Y, Gong, P.
Deposit date:2019-02-22
Release date:2019-11-27
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.659 Å)
Cite:Structural insight into the length-dependent binding of ssDNA by SP_0782 from Streptococcus pneumoniae, reveals a divergence in the DNA-binding interface of PC4-like proteins.
Nucleic Acids Res., 48, 2020
6JIQ
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BU of 6jiq by Molmil
Crystal structure of Streptococcus pneumoniae SP_0782 (residues 7-79) in complex with single-stranded DNA dT6
Descriptor: DNA (5'-D(*TP*TP*TP*TP*T)-3'), SP_0782
Authors:Fang, X, Lu, G, Li, S, Zhu, J, Yang, Y, Gong, P.
Deposit date:2019-02-22
Release date:2019-11-27
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.67 Å)
Cite:Structural insight into the length-dependent binding of ssDNA by SP_0782 from Streptococcus pneumoniae, reveals a divergence in the DNA-binding interface of PC4-like proteins.
Nucleic Acids Res., 48, 2020
7X3Y
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BU of 7x3y by Molmil
Cryo-EM structure of Coxsackievirus B1 empty particle in complex with nAb 9A3 (CVB1-E:9A3)
Descriptor: 9A3 heavy chain, 9A3 light chain, VP2, ...
Authors:Zheng, Q, Zhu, R, Sun, H, Cheng, T, Li, S, Xia, N.
Deposit date:2022-03-01
Release date:2023-06-07
Method:ELECTRON MICROSCOPY (3.32 Å)
Cite:Cryo-EM structure of Coxsackievirus B1 empty particle in complex with nAb 9A3 (CVB1-E:9A3)
To Be Published
7YCH
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BU of 7ych by Molmil
Cryo-EM structure of Tetrahymena ribozyme conformation 3 undergoing the first-step self-splicing
Descriptor: GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, RNA (393-MER), ...
Authors:Zhang, X, Li, S, Pintilie, G, Palo, M.Z, Zhang, K.
Deposit date:2022-07-01
Release date:2023-07-05
Last modified:2023-08-16
Method:ELECTRON MICROSCOPY (3.09 Å)
Cite:Snapshots of the first-step self-splicing of Tetrahymena ribozyme revealed by cryo-EM.
Nucleic Acids Res., 51, 2023
7YCG
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BU of 7ycg by Molmil
Cryo-EM structure of Tetrahymena ribozyme conformation 2 undergoing the first-step self-splicing
Descriptor: GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, RNA (393-MER), ...
Authors:Zhang, X, Li, S, Pintilie, G, Palo, M.Z, Zhang, K.
Deposit date:2022-07-01
Release date:2023-07-05
Last modified:2023-08-16
Method:ELECTRON MICROSCOPY (3.18 Å)
Cite:Snapshots of the first-step self-splicing of Tetrahymena ribozyme revealed by cryo-EM.
Nucleic Acids Res., 51, 2023
7YCI
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BU of 7yci by Molmil
Cryo-EM structure of Tetrahymena ribozyme conformation 4 undergoing the first-step self-splicing
Descriptor: GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, RNA (389-MER), ...
Authors:Zhang, X, Li, S, Pintilie, G, Palo, M.Z, Zhang, K.
Deposit date:2022-07-01
Release date:2023-07-05
Last modified:2023-08-16
Method:ELECTRON MICROSCOPY (2.98 Å)
Cite:Snapshots of the first-step self-splicing of Tetrahymena ribozyme revealed by cryo-EM.
Nucleic Acids Res., 51, 2023

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