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PDB: 373 results

4MZ4
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Discovery of an Irreversible HCV NS5B Polymerase Inhibitor
Descriptor: 1-[(2-chloroquinolin-3-yl)methyl]-6-fluoro-5-methyl-3-(2-oxo-1,2-dihydropyridin-3-yl)-1H-indole-2-carboxylic acid, PHOSPHATE ION, RNA-directed RNA polymerase
Authors:Zeng, Q, Anilkumar, G.N, Rosenblum, S.B, Huang, H.-C, Lesburg, C.A, Jiang, Y, Selyutin, O, Chan, T.-Y, Bennett, F, Chen, K.X, Venkatraman, S, Sannigrahi, M, Velazquez, F, Duca, J.S, Gavalas, S, Huang, Y, Pu, H, Wang, L, Pinto, P, Vibulbhan, B, Agrawal, S, Ferrari, E, Jiang, C.-K, Li, C, Hesk, D, Gesell, J, Sorota, S, Shih, N.-Y, Njoroge, F.G, Kozlowski, J.A.
Deposit date:2013-09-29
Release date:2013-12-11
Last modified:2013-12-18
Method:X-RAY DIFFRACTION (1.63 Å)
Cite:Discovery of an irreversible HCV NS5B polymerase inhibitor.
Bioorg.Med.Chem.Lett., 23, 2013
4PE8
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BU of 4pe8 by Molmil
Crystal structure of TatD in complex with trinucleotide DNA
Descriptor: DNA (5'-D(*GP*CP*T)-3'), Tat-linked quality control protein TatD
Authors:Chen, Y, Li, C.-L, Hsiao, Y.-Y, Duh, Y, Yuan, H.S.
Deposit date:2014-04-23
Release date:2014-08-27
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.894 Å)
Cite:Structure and function of TatD exonuclease in DNA repair.
Nucleic Acids Res., 42, 2014
1Z23
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BU of 1z23 by Molmil
The serine-rich domain from Crk-associated substrate (p130Cas)
Descriptor: CRK-associated substrate
Authors:Briknarova, K, Nasertorabi, F, Havert, M.L, Eggleston, E, Hoyt, D.W, Li, C, Olson, A.J, Vuori, K, Ely, K.R.
Deposit date:2005-03-07
Release date:2005-04-05
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:The serine-rich domain from Crk-associated substrate (p130cas) is a four-helix bundle.
J.Biol.Chem., 280, 2005
4M8V
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BU of 4m8v by Molmil
Crystal structure of Human double mutant beta2-microglobulin Q8H-L65T
Descriptor: Beta-2-microglobulin
Authors:Lai, M.H, Wu, P.H, Li, C.H, Chang, C.C, Chen, C.J.
Deposit date:2013-08-14
Release date:2014-10-15
Last modified:2018-04-18
Method:X-RAY DIFFRACTION (1.951 Å)
Cite:Crystal structure of Human double mutant beta2-microglobulin Q8H-L65T
To be Published
4P5U
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BU of 4p5u by Molmil
Crystal structure of TatD
Descriptor: Tat-linked quality control protein TatD
Authors:Chen, Y, Li, C.-L, Hsiao, Y.-Y, Duh, Y, Yuan, H.S.
Deposit date:2014-03-20
Release date:2014-08-27
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure and function of TatD exonuclease in DNA repair.
Nucleic Acids Res., 42, 2014
5C70
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BU of 5c70 by Molmil
The structure of Aspergillus oryzae beta-glucuronidase
Descriptor: Glucuronidase
Authors:Sun, H.L, Lv, B, Huang, S, Sun, Q.F, Li, C, Jiang, T.
Deposit date:2015-06-24
Release date:2016-06-15
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Enhancing the Thermostability of beta-Glucuronidase by Rationally Redesigning the Catalytic Domain Based on Sequence Alignment Strategy
Ind Eng Chem Res, 55, 2016
4M9O
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BU of 4m9o by Molmil
Crystal Structure of monomeric zebrafish beta-2-microglobulin
Descriptor: Beta-2-microglobulin
Authors:Wu, P.H, Lai, M.H, Li, C.H, Chang, C.C, Chen, C.J.
Deposit date:2013-08-15
Release date:2014-09-24
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.14 Å)
Cite:Crystal Structure of monomeric zebrafish beta-2-microglobulin
To be Published
7E6Q
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BU of 7e6q by Molmil
Crystal structure of influenza A virus neuraminidase N5 complexed with 4'-phenyl-1,2,3-triazolylated oseltamivir carboxylate
Descriptor: (3R,4R,5S)-4-acetamido-3-pentan-3-yloxy-5-(4-phenyl-1,2,3-triazol-1-yl)cyclohexene-1-carboxylic acid, 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
Authors:Wang, P.F, Babayemi, O.O, Li, C.N, Fu, L.F, Zhang, S.S, Qi, J.X, Lv, X, Li, X.B.
Deposit date:2021-02-23
Release date:2021-03-17
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structure-based design of 5'-substituted 1,2,3-triazolylated oseltamivir derivatives as potent influenza neuraminidase inhibitors.
Rsc Adv, 11, 2021
7ENQ
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BU of 7enq by Molmil
Crystal structure of human NAMPT in complex with compound NAT
Descriptor: 2-(2-~{tert}-butylphenoxy)-~{N}-(4-hydroxyphenyl)ethanamide, Nicotinamide phosphoribosyltransferase, PHOSPHATE ION
Authors:Wang, G, Wu, C, Liu, M, Yao, H, Li, C, Wang, L, Tang, Y.
Deposit date:2021-04-19
Release date:2022-05-04
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.204966 Å)
Cite:Discovery of small-molecule activators of nicotinamide phosphoribosyltransferase (NAMPT) and their preclinical neuroprotective activity.
Cell Res., 32, 2022
6NBI
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BU of 6nbi by Molmil
Cryo-EM structure of parathyroid hormone receptor type 1 in complex with a long-acting parathyroid hormone analog and G protein
Descriptor: CHOLESTEROL, Gs protein alpha subunit, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, ...
Authors:Zhao, L.-H, Ma, S, Sutkeviciute, I, Shen, D.-D, Zhou, X.E, de Waal, P.P, Li, C.-Y, Kang, Y, Clark, L.J, Jean-Alphonse, F.G, White, A.D, Xiao, K, Yang, D, Jiang, Y, Watanabe, T, Gardella, T.J, Melcher, K, Wang, M.-W, Vilardaga, J.-P, Xu, H.E, Zhang, Y.
Deposit date:2018-12-07
Release date:2019-04-17
Last modified:2019-12-18
Method:ELECTRON MICROSCOPY (4 Å)
Cite:Structure and dynamics of the active human parathyroid hormone receptor-1.
Science, 364, 2019
6NBH
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BU of 6nbh by Molmil
Cryo-EM structure of parathyroid hormone receptor type 1 in complex with a long-acting parathyroid hormone analog and G protein
Descriptor: CHOLESTEROL, Gs protein alpha subunit, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, ...
Authors:Zhao, L.-H, Ma, S, Sutkeviciute, I, Shen, D.-D, Zhou, X.E, de Waal, P.P, Li, C.-Y, Kang, Y, Clark, L.J, Jean-Alphonse, F.G, White, A.D, Xiao, K, Yang, D, Jiang, Y, Watanabe, T, Gardella, T.J, Melcher, K, Wang, M.-W, Vilardaga, J.-P, Xu, H.E, Zhang, Y.
Deposit date:2018-12-07
Release date:2019-04-17
Last modified:2019-12-18
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Structure and dynamics of the active human parathyroid hormone receptor-1.
Science, 364, 2019
6NBF
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BU of 6nbf by Molmil
Cryo-EM structure of parathyroid hormone receptor type 1 in complex with a long-acting parathyroid hormone analog and G protein
Descriptor: CHOLESTEROL, Gs protein alpha subunit, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, ...
Authors:Zhao, L.-H, Ma, S, Sutkeviciute, I, Shen, D.-D, Zhou, X.E, de Waal, P.P, Li, C.-Y, Kang, Y, Clark, L.J, Jean-Alphonse, F.G, White, A.D, Xiao, K, Yang, D, Jiang, Y, Watanabe, T, Gardella, T.J, Melcher, K, Wang, M.-W, Vilardaga, J.-P, Xu, H.E, Zhang, Y.
Deposit date:2018-12-07
Release date:2019-04-17
Last modified:2019-12-18
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Structure and dynamics of the active human parathyroid hormone receptor-1.
Science, 364, 2019
6AK1
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BU of 6ak1 by Molmil
Crystal structure of DmoA from Hyphomicrobium sulfonivorans
Descriptor: Dimethyl-sulfide monooxygenase
Authors:Cao, H.Y, Wang, P, Peng, M, Li, C.Y.
Deposit date:2018-08-28
Release date:2018-12-12
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.284 Å)
Cite:Crystal structure of the dimethylsulfide monooxygenase DmoA from Hyphomicrobium sulfonivorans.
Acta Crystallogr.,Sect.F, 74, 2018
2I8U
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BU of 2i8u by Molmil
GDP-mannose mannosyl hydrolase-calcium-GDP product complex
Descriptor: CALCIUM ION, GDP-mannose mannosyl hydrolase, GUANOSINE-5'-DIPHOSPHATE
Authors:Zou, Y, Li, C, Brunzelle, J.S, Nair, S.K.
Deposit date:2006-09-03
Release date:2007-06-19
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Molecular basis for substrate selectivity and specificity by an LPS biosynthetic enzyme
Biochemistry, 46, 2007
2I8T
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BU of 2i8t by Molmil
GDP-mannose mannosyl hydrolase-calcium-GDP-mannose complex
Descriptor: CALCIUM ION, GDP-mannose mannosyl hydrolase, GLYCEROL, ...
Authors:Zou, Y, Li, C, Brunzelle, J.S, Nair, S.K.
Deposit date:2006-09-03
Release date:2007-06-19
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Molecular basis for substrate selectivity and specificity by an LPS biosynthetic enzyme
Biochemistry, 46, 2007
7VVX
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BU of 7vvx by Molmil
MmtN-SAH-Met complex
Descriptor: METHIONINE, PHOSPHATE ION, S-ADENOSYL-L-HOMOCYSTEINE, ...
Authors:Zhang, Y.Z, Peng, M, Li, C.Y.
Deposit date:2021-11-09
Release date:2022-04-20
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2.51 Å)
Cite:Insights into methionine S-methylation in diverse organisms.
Nat Commun, 13, 2022
7VVW
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BU of 7vvw by Molmil
MmtN-SAM complex
Descriptor: GLYCEROL, PHOSPHATE ION, S-ADENOSYLMETHIONINE, ...
Authors:Zhang, Y.Z, Peng, M, Li, C.Y.
Deposit date:2021-11-09
Release date:2022-04-20
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2.11 Å)
Cite:Insights into methionine S-methylation in diverse organisms.
Nat Commun, 13, 2022
7VVV
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BU of 7vvv by Molmil
Crystal structure of MmtN
Descriptor: PHOSPHATE ION, SAM-dependent methyltransferase
Authors:Peng, M, Li, C.Y.
Deposit date:2021-11-09
Release date:2022-04-20
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Insights into methionine S-methylation in diverse organisms.
Nat Commun, 13, 2022
7X7W
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BU of 7x7w by Molmil
The X-ray Crystallographic Structure of D-Psicose 3-epimerase from Clostridia bacterium
Descriptor: D-PSICOSE 3-EPIMERASE, MANGANESE (II) ION
Authors:Li, Z.F, Ban, X.F, Xie, X.F, Tian, Y.X, Li, C.M, Gu, Z.B.
Deposit date:2022-03-10
Release date:2022-09-07
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.097 Å)
Cite:Crystal structure of a novel homodimeric D-allulose 3-epimerase from a Clostridia bacterium
Acta Crystallogr.,Sect.D, 78, 2022
6A53
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BU of 6a53 by Molmil
Crystal structure of DddK
Descriptor: MANGANESE (II) ION, Novel protein with potential Cupin domain
Authors:Zhang, Y.Z, Li, C.Y.
Deposit date:2018-06-21
Release date:2019-02-20
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure-Function Analysis Indicates that an Active-Site Water Molecule Participates in Dimethylsulfoniopropionate Cleavage by DddK.
Appl. Environ. Microbiol., 85, 2019
5EOD
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BU of 5eod by Molmil
Human Plasma Coagulation FXI with peptide LP2
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Coagulation factor XI, LP2
Authors:Wong, S.S, Ostergaard, S, Hall, G, Li, C, Williams, P.M, Stennicke, H, Emsley, J.
Deposit date:2015-11-10
Release date:2016-04-06
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:A novel DFP tripeptide motif interacts with the coagulation factor XI apple 2 domain.
Blood, 127, 2016
4MPA
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BU of 4mpa by Molmil
Crystal structure of NHERF1-CXCR2 signaling complex in P21 space group
Descriptor: ACETIC ACID, CHLORIDE ION, Na(+)/H(+) exchange regulatory cofactor NHE-RF1, ...
Authors:Jiang, Y, Lu, G, Wu, Y, Brunzelle, J, Sirinupong, N, Li, C, Yang, Z.
Deposit date:2013-09-12
Release date:2014-01-15
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.097 Å)
Cite:New Conformational State of NHERF1-CXCR2 Signaling Complex Captured by Crystal Lattice Trapping.
Plos One, 8, 2013
7NFV
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BU of 7nfv by Molmil
Structure of SARS-CoV-2 Papain-like protease PLpro
Descriptor: CHLORIDE ION, GLYCEROL, PHOSPHATE ION, ...
Authors:Srinivasan, V, Gunther, S, Reinke, P, Werner, N, Falke, S, Brognaro, H, Ullah, N, Andaleeb, H, Perbandt, M, Alves Franca, B, Schwinzer, M, Wang, M, Sprenger, J, Lieske, J, Ginn, H, Lane, T.J, Yefanov, O, Gelisio, L, Koua, F, Saouane, S, Tolstikova, A, Groessler, M, Fleckenstein, H, Ewert, W, Trost, F, Lorenzen, K, Schubert, R, Han, H, Schmidt, C, Brings, L, Ehrt, C, Rarey, M, Galchenkova, M, Gevorkov, Y, Li, C, Perk, A, Awel, S, Hinrichs, W, Meents, A, Betzel, C.
Deposit date:2021-02-07
Release date:2021-02-24
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.42 Å)
Cite:Antiviral activity of natural phenolic compounds in complex at an allosteric site of SARS-CoV-2 papain-like protease.
Commun Biol, 5, 2022
4LMM
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BU of 4lmm by Molmil
Crystal structure of NHERF1 PDZ1 domain complexed with the CXCR2 C-terminal tail in P21 space group
Descriptor: ACETIC ACID, CHLORIDE ION, Na(+)/H(+) exchange regulatory cofactor NHE-RF1
Authors:Jiang, Y, Lu, G, Wu, Y, Brunzelle, J, Sirinupong, N, Li, C, Yang, Z.
Deposit date:2013-07-10
Release date:2014-01-15
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:New Conformational State of NHERF1-CXCR2 Signaling Complex Captured by Crystal Lattice Trapping.
Plos One, 8, 2013
5IVL
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BU of 5ivl by Molmil
CshA Helicase
Descriptor: DEAD-box ATP-dependent RNA helicase CshA, SULFATE ION
Authors:Huen, J, Lin, C.-L, Yi, W.-L, Li, C.-L, Yuan, H.
Deposit date:2016-03-21
Release date:2017-03-22
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural Insights into a Unique Dimeric DEAD-Box Helicase CshA that Promotes RNA Decay.
Structure, 25, 2017

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數據於2024-05-29公開中

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