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PDB: 160 results

8C6Y
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PBP AccA from A. tumefaciens Bo542 in apoform 2
Descriptor: 1,2-ETHANEDIOL, Agrocinopine utilization periplasmic binding protein AccA
Authors:Morera, S, Vigouroux, A, legrand, P.
Deposit date:2023-01-12
Release date:2024-01-24
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.901 Å)
Cite:A highly conserved ligand-binding site for AccA transporters of antibiotic and quorum-sensing regulator in Agrobacterium leads to a different specificity.
Biochem.J., 481, 2024
5OLL
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BU of 5oll by Molmil
Crystal structure of gurmarin, a sweet taste suppressing polypeptide
Descriptor: Gurmarin, NICKEL (II) ION
Authors:Sigoillot, M, Neiers, F, Legrand, P, Roblin, P, Briand, L.
Deposit date:2017-07-28
Release date:2018-08-08
Last modified:2019-02-20
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:The Crystal Structure of Gurmarin, a Sweet Taste-Suppressing Protein: Identification of the Amino Acid Residues Essential for Inhibition.
Chem. Senses, 43, 2018
6ZA3
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BU of 6za3 by Molmil
Structure of the transcriptional repressor Atu1419 (VanR) from agrobacterium fabrum in complex a palindromic DNA (C2221 space group)
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, CHLORIDE ION, ...
Authors:Morera, S, Vigouroux, A, Legrand, P.
Deposit date:2020-06-04
Release date:2020-12-02
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Characterization of the first tetrameric transcription factor of the GntR superfamily with allosteric regulation from the bacterial pathogen Agrobacterium fabrum.
Nucleic Acids Res., 49, 2021
6ZAB
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Structure of the transcriptional repressor Atu1419 (VanR) from agrobacterium fabrum in complex a palindromic DNA (P6422 space group)
Descriptor: 1,2-ETHANEDIOL, CITRIC ACID, DI(HYDROXYETHYL)ETHER, ...
Authors:Morera, S, Naretto, A, Vigouroux, A, Legrand, P.
Deposit date:2020-06-05
Release date:2020-12-02
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Characterization of the first tetrameric transcription factor of the GntR superfamily with allosteric regulation from the bacterial pathogen Agrobacterium fabrum.
Nucleic Acids Res., 49, 2021
4FMN
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BU of 4fmn by Molmil
Structure of the C-terminal domain of the Saccharomyces cerevisiae MUTL alpha (MLH1/PMS1) heterodimer bound to a fragment of NTG2
Descriptor: 1,2-ETHANEDIOL, DNA mismatch repair protein MLH1, DNA mismatch repair protein PMS1, ...
Authors:Gueneau, E, Legrand, P, Charbonnier, J.B.
Deposit date:2012-06-18
Release date:2013-02-20
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.69 Å)
Cite:Structure of the MutL alpha C-terminal domain reveals how Mlh1 contributes to Pms1 endonuclease site.
Nat.Struct.Mol.Biol., 20, 2013
2V7F
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BU of 2v7f by Molmil
Structure of P. abyssi RPS19 protein
Descriptor: CHLORIDE ION, RPS19E SSU RIBOSOMAL PROTEIN S19E
Authors:Gregory, L.A, Aguissa-Toure, A.H, Pinaud, N, Legrand, P, Gleizes, P.E, Fribourg, S.
Deposit date:2007-07-30
Release date:2007-09-11
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.15 Å)
Cite:Molecular Basis of Diamond Blackfan Anemia: Structure and Function Analysis of Rps19.
Nucleic Acids Res., 35, 2007
4E4W
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BU of 4e4w by Molmil
Structure of the C-terminal domain of the Saccharomyces cerevisiae MUTL alpha (MLH1/PMS1) heterodimer
Descriptor: 1,2-ETHANEDIOL, DNA mismatch repair protein MLH1, DNA mismatch repair protein PMS1, ...
Authors:Gueneau, E, Legrand, P, Charbonnier, J.B.
Deposit date:2012-03-13
Release date:2013-02-20
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structure of the MutLalpha C-terminal domain reveals how Mlh1 contributes to Pms1 endonuclease site.
Nat.Struct.Mol.Biol., 20, 2013
3U6X
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Phage TP901-1 baseplate tripod
Descriptor: BPP, BROMIDE ION, ORF48
Authors:Veesler, D, Spinelli, S, Mahony, J, Lichiere, J, Blangy, S, Bricogne, G, Legrand, P, Ortiz-Lombardia, M, Campanacci, V.I, van Sinderen, D, Cambillau, C.
Deposit date:2011-10-13
Release date:2012-07-04
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structure of the phage TP901-1 1.8 MDa baseplate suggests an alternative host adhesion mechanism.
Proc.Natl.Acad.Sci.USA, 109, 2012
4FMO
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BU of 4fmo by Molmil
Structure of the C-terminal domain of the Saccharomyces cerevisiae MUTL alpha (MLH1/PMS1) heterodimer bound to a fragment of exo1
Descriptor: DNA mismatch repair protein MLH1, DNA mismatch repair protein PMS1, DNA repair peptide, ...
Authors:Gueneau, E, Legrand, P, Charbonnier, J.B.
Deposit date:2012-06-18
Release date:2013-02-20
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (3.04 Å)
Cite:Structure of the MutL alpha C-terminal domain reveals how Mlh1 contributes to Pms1 endonuclease site.
Nat.Struct.Mol.Biol., 20, 2013
5OYL
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BU of 5oyl by Molmil
VSV G CR2
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, GLYCEROL, ...
Authors:Albertini, A.A, Belot, L, Legrand, P, Gaudin, Y.
Deposit date:2017-09-11
Release date:2018-03-21
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Structural basis for the recognition of LDL-receptor family members by VSV glycoprotein.
Nat Commun, 9, 2018
6ZA7
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BU of 6za7 by Molmil
Structure of the apo transcriptional repressor Atu1419 (VanR) from agrobacterium fabrum
Descriptor: DI(HYDROXYETHYL)ETHER, GLYCEROL, SULFATE ION, ...
Authors:Morera, S, Vigouroux, A, Legrand, P.
Deposit date:2020-06-04
Release date:2020-12-02
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.34 Å)
Cite:Characterization of the first tetrameric transcription factor of the GntR superfamily with allosteric regulation from the bacterial pathogen Agrobacterium fabrum.
Nucleic Acids Res., 49, 2021
4C3I
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BU of 4c3i by Molmil
Structure of 14-subunit RNA polymerase I at 3.0 A resolution, crystal form C2-100
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, DNA-DIRECTED RNA POLYMERASE I SUBUNIT RPA12, DNA-DIRECTED RNA POLYMERASE I SUBUNIT RPA135, ...
Authors:Fernandez-Tornero, C, Moreno-Morcillo, M, Rashid, U.J, Taylor, N.M.I, Ruiz, F.M, Gruene, T, Legrand, P, Steuerwald, U, Muller, C.W.
Deposit date:2013-08-24
Release date:2013-10-23
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (3 Å)
Cite:Crystal Structure of the 14-Subunit RNA Polymerase I
Nature, 502, 2013
1Q5M
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BU of 1q5m by Molmil
Binary complex of rabbit 20alpha-hydroxysteroid dehydrogenase with NADPH
Descriptor: NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, Prostaglandin-E2 9-reductase, SULFATE ION
Authors:Couture, J.F, Legrand, P, Cantin, L, Labrie, F, Luu-The, V, Breton, R.
Deposit date:2003-08-08
Release date:2004-05-18
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.32 Å)
Cite:Loop Relaxation, A Mechanism that Explains the Reduced Specificity of Rabbit 20alpha-Hydroxysteroid Dehydrogenase, A Member of the Aldo-Keto Reductase Superfamily.
J.Mol.Biol., 339, 2004
1Q13
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BU of 1q13 by Molmil
Crystal structure of rabbit 20alpha hyroxysteroid dehydrogenase in ternary complex with NADP and testosterone
Descriptor: NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, Prostaglandin-E2 9-reductase, SULFATE ION, ...
Authors:Couture, J.-F, Cantin, L, Legrand, P, Luu-The, V, Labrie, F, Breton, R.
Deposit date:2003-07-18
Release date:2004-11-16
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.08 Å)
Cite:Loop relaxation, a mechanism that explains the reduced specificity of rabbit 20alpha-hydroxysteroid dehydrogenase, a member of the aldo-keto reductase superfamily.
J. Mol. Biol., 339, 2004
5OY9
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BU of 5oy9 by Molmil
VSV G CR3
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
Authors:Albertini, A.A, Belot, L, Legrand, P, Gaudin, Y.
Deposit date:2017-09-08
Release date:2018-03-21
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (3.6 Å)
Cite:Structural basis for the recognition of LDL-receptor family members by VSV glycoprotein.
Nat Commun, 9, 2018
7QBU
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BU of 7qbu by Molmil
B12-dependent radical SAM methyltransferase, Mmp10 with [4Fe-4S] cluster, cobalamin, and S-methyl-5'-thioadenosine bound.
Descriptor: 5'-DEOXY-5'-METHYLTHIOADENOSINE, CO-METHYLCOBALAMIN, DI(HYDROXYETHYL)ETHER, ...
Authors:Fyfe, C.D, Chavas, L.M.G, Legrand, P, Benjdia, A, Berteau, O.
Deposit date:2021-11-19
Release date:2022-02-02
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.298 Å)
Cite:Crystallographic snapshots of a B 12 -dependent radical SAM methyltransferase.
Nature, 602, 2022
7QBT
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BU of 7qbt by Molmil
B12-dependent radical SAM methyltransferase, Mmp10 with [4Fe-4S] cluster, cobalamin, and S-methyl-5'-thioadenosine bound.
Descriptor: 5'-DEOXY-5'-METHYLTHIOADENOSINE, CO-METHYLCOBALAMIN, FE (III) ION, ...
Authors:Fyfe, C.D, Chavas, L.M.G, Legrand, P, Benjdia, A, Berteau, O.
Deposit date:2021-11-19
Release date:2022-02-02
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystallographic snapshots of a B 12 -dependent radical SAM methyltransferase.
Nature, 602, 2022
7QBV
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B12-dependent radical SAM methyltransferase, Mmp10 with [4Fe-4S] cluster, cobalamin, and S-adenosyl-L-homocysteine bound.
Descriptor: CO-METHYLCOBALAMIN, FE (III) ION, IRON/SULFUR CLUSTER, ...
Authors:Fyfe, C.D, Chavas, L.M.G, Legrand, P, Benjdia, A, Berteau, O.
Deposit date:2021-11-19
Release date:2022-02-02
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.701 Å)
Cite:Crystallographic snapshots of a B 12 -dependent radical SAM methyltransferase.
Nature, 602, 2022
4A98
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X-ray structure of a pentameric ligand gated ion channel from Erwinia chrysanthemi (ELIC) in complex with bromoflurazepam
Descriptor: 7-BROMO-1-[2-(DIETHYLAMINO)ETHYL]-5-(2-FLUOROPHENYL)-1,3-DIHYDRO-2H-1,4-BENZODIAZEPIN-2-ONE, CYS-LOOP LIGAND-GATED ION CHANNEL
Authors:Spurny, R, Brams, M, Nury, H, Legrand, P, Ulens, C.
Deposit date:2011-11-24
Release date:2012-10-17
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (3.61 Å)
Cite:Pentameric Ligand-Gated Ion Channel Elic is Activated by Gaba and Modulated by Benzodiazepines.
Proc.Natl.Acad.Sci.USA, 109, 2012
5OW3
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BU of 5ow3 by Molmil
Crystal structure of a C-terminally truncated trimeric ectodomain of the Arabidopsis thaliana gamete fusion protein HAP2
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, ACETATE ION, GLYCEROL, ...
Authors:Fedry, J, Legrand, P, Rey, F.A, Krey, T.
Deposit date:2017-08-30
Release date:2018-08-22
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Evolutionary diversification of the HAP2 membrane insertion motifs to drive gamete fusion across eukaryotes.
PLoS Biol., 16, 2018
8AAS
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BU of 8aas by Molmil
Crystal structure of the Pyrococcus abyssi RPA trimerization core bound to poly-dT20 ssDNA
Descriptor: CALCIUM ION, DNA (5'-D(P*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*T)-3'), RPA14 subunit of the hetero-oligomeric complex involved in homologous recombination, ...
Authors:Madru, C, Legrand, P, Sauguet, L.
Deposit date:2022-07-01
Release date:2023-05-03
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:DNA-binding mechanism and evolution of replication protein A.
Nat Commun, 14, 2023
3ZVY
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BU of 3zvy by Molmil
PHD finger of human UHRF1 in complex with unmodified histone H3 N- terminal tail
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CHLORIDE ION, E3 UBIQUITIN-PROTEIN LIGASE UHRF1, ...
Authors:Lallous, N, Birck, C, Mc Ewen, A.G, Legrand, P, Samama, J.P.
Deposit date:2011-07-28
Release date:2011-12-07
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:The Phd Finger of Human Uhrf1 Reveals a New Subgroup of Unmethylated Histone H3 Tail Readers.
Plos One, 6, 2011
6ERF
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BU of 6erf by Molmil
Complex of APLF factor and Ku heterodimer bound to DNA
Descriptor: Aprataxin and PNK-like factor, DNA (34-MER), DNA (5'-D(*GP*TP*TP*TP*TP*TP*AP*GP*TP*TP*TP*AP*TP*TP*GP*GP*GP*CP*GP*CP*G)-3'), ...
Authors:Nemoz, C, Legrand, P, Ropars, V, Charbonnier, J.B.
Deposit date:2017-10-18
Release date:2018-10-17
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (3.01 Å)
Cite:XLF and APLF bind Ku80 at two remote sites to ensure DNA repair by non-homologous end joining.
Nat.Struct.Mol.Biol., 25, 2018
5LYS
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BU of 5lys by Molmil
The crystal structure of 7SK 5'-hairpin - Gold derivative
Descriptor: 7SK RNA, GOLD ION, MAGNESIUM ION, ...
Authors:Martinez-Zapien, D, Legrand, P, McEwen, A.G, Pasquali, S, Dock-Bregeon, A.-C.
Deposit date:2016-09-28
Release date:2017-01-25
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.32 Å)
Cite:The crystal structure of the 5 functional domain of the transcription riboregulator 7SK.
Nucleic Acids Res., 45, 2017
6Y1X
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X-ray structure of the radical SAM protein NifB, a key nitrogenase maturating enzyme
Descriptor: CHLORIDE ION, IRON/SULFUR CLUSTER, Radical SAM domain protein, ...
Authors:Sosa-Fajardo, A, Legrand, P, Paya-Tormo, L, Martin, L, Pellicer-Martinez, M.T, Echavarri-Erasun, C, Vernede, X, Rubio, L.M, Nicolet, Y.
Deposit date:2020-02-14
Release date:2020-06-17
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structural Insights into the Mechanism of the Radical SAM Carbide Synthase NifB, a Key Nitrogenase Cofactor Maturating Enzyme.
J.Am.Chem.Soc., 142, 2020

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