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PDB: 302 件
8GA5
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BU of 8ga5 by Molmil
CLC-ec1 L25C/A450C/C85A at pH 4.5 100mM Cl Intermediate
分子名称: CHLORIDE ION, H(+)/Cl(-) exchange transporter ClcA
著者Fortea, E, Lee, S, Argyos, Y, Chadda, R, Ciftci, D, Huysmans, G, Robertson, J.L, Boudker, O, Accardi, A.
登録日2023-02-22
公開日2024-02-07
最終更新日2024-05-01
実験手法ELECTRON MICROSCOPY (2.6 Å)
主引用文献Structural basis of pH-dependent activation in a CLC transporter.
Nat.Struct.Mol.Biol., 31, 2024
7TFM
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BU of 7tfm by Molmil
Atomic Structure of the Leishmania spp. Hsp100 N-Domain
分子名称: ATP-dependent Clp protease subunit, heat shock protein 100 (HSP100), GLYCEROL
著者Mercado, J.M, Lee, S, Chang, C, Sung, N, Soong, L, Catic, A, Tsai, F.T.F.
登録日2022-01-06
公開日2022-02-16
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.055 Å)
主引用文献Atomic structure of the Leishmania spp. Hsp100 N-domain.
Proteins, 90, 2022
3KL9
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BU of 3kl9 by Molmil
Crystal structure of PepA from Streptococcus pneumoniae
分子名称: Glutamyl aminopeptidase, ZINC ION
著者Kim, K.K, Lee, S, Kim, D.
登録日2009-11-07
公開日2010-02-02
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structural basis for the substrate specificity of PepA from Streptococcus pneumoniae, a dodecameric tetrahedral protease
Biochem.Biophys.Res.Commun., 391, 2010
4OFE
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BU of 4ofe by Molmil
Structural basis for thymine glycosylase activity on T:O6-methylG mismatch by methyl-CpG binding domain protein 4: Implications for roles of Arg468 in mismatch recognition and catalysis
分子名称: 12-mer DNA(G), 12-mer DNA(T), MAGNESIUM ION, ...
著者Ouzon-Shubeita, H, Lin, Y.-L, Lee, S.
登録日2014-01-14
公開日2015-04-22
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Structure of R468K/D560N MBD4 bound to G:T mispair DNA
To be Published
4PHE
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BU of 4phe by Molmil
Structure of human DNA polymerase beta complexed with T in the template base paired with incoming non-hydrolyzable GTP
分子名称: 2'-deoxy-5'-O-[(R)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]guanosine, DNA (5'-D(*CP*CP*GP*AP*CP*TP*GP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3'), DNA (5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*C)-3'), ...
著者Koag, M.C, Lee, S.
登録日2014-05-06
公開日2015-05-06
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献The spontaneous base substitution mechanisms of human DNA polymerase beta
To Be Published
4PHA
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BU of 4pha by Molmil
Structure of human DNA polymerase beta complexed with A in the template base paired with incoming non-hydrolyzable CTP
分子名称: 2'-deoxy-5'-O-[(R)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]cytidine, DNA (5'-D(*CP*CP*GP*AP*CP*AP*TP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3'), DNA (5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*A)-3'), ...
著者Koag, M.C, Lee, S.
登録日2014-05-05
公開日2014-09-24
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.52 Å)
主引用文献The spontaneous replication error and the mismatch discrimination mechanisms of human DNA polymerase beta.
Nucleic Acids Res., 42, 2015
1IA5
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BU of 1ia5 by Molmil
POLYGALACTURONASE FROM ASPERGILLUS ACULEATUS
分子名称: POLYGALACTURONASE, alpha-D-mannopyranose, alpha-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
著者Cho, S.W, Lee, S, Shin, W.
登録日2001-03-22
公開日2001-09-19
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献The X-ray structure of Aspergillus aculeatus polygalacturonase and a modeled structure of the polygalacturonase-octagalacturonate complex.
J.Mol.Biol., 311, 2001
5HHH
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BU of 5hhh by Molmil
Structure of human DNA polymerase beta Host-Guest complexed with the control G for N7-CBZ-platination
分子名称: DNA (5'-D(*CP*CP*GP*AP*CP*GP*GP*AP*GP*GP*AP*GP*CP*AP*GP*G)-3'), DNA (5'-D(P*CP*CP*TP*GP*CP*TP*CP*CP*TP*C)-3'), DNA (5'-D(P*GP*TP*CP*GP*G)-3'), ...
著者Koag, M.-C, Lee, S.
登録日2016-01-11
公開日2017-01-18
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.363 Å)
主引用文献Synthesis, structure, and biological evaluation of a platinum-carbazole conjugate.
Chem Biol Drug Des, 91, 2018
4PGY
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BU of 4pgy by Molmil
Structure of human DNA polymerase beta complexed with a nicked DNA containing a GT at N-1 position and GC at N position
分子名称: DNA (5'-D(*CP*CP*GP*AP*CP*GP*GP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3'), DNA (5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*TP*C)-3'), DNA (5'-D(P*GP*TP*CP*GP*G)-3'), ...
著者Koag, M.C, Lee, S.
登録日2014-05-03
公開日2015-05-06
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.26 Å)
主引用文献The spontaneous base substitution mechanisms of human DNA polymerase beta
To Be Published
4PGQ
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BU of 4pgq by Molmil
Structure of human DNA polymerase beta complexed with G in the template base paired with incoming non-hydrolyzable TTP
分子名称: 5'-O-[(R)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]thymidine, DNA (5'-D(*CP*CP*GP*AP*CP*GP*TP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3'), DNA (5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*A)-3'), ...
著者Koag, M.C, Lee, S.
登録日2014-05-02
公開日2014-10-01
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献The spontaneous replication error and the mismatch discrimination mechanisms of human DNA polymerase beta.
Nucleic Acids Res., 42, 2015
4PHP
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BU of 4php by Molmil
Structure of human DNA polymerase beta complexed with T in the template base paired with incoming non-hydrolyzable GTP and MANGANESE
分子名称: 2'-deoxy-5'-O-[(R)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]guanosine, DNA (5'-D(*CP*CP*GP*AP*CP*TP*GP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3'), DNA (5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*C)-3'), ...
著者Koag, M.C, Lee, S.
登録日2014-05-06
公開日2015-05-06
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献The spontaneous base substitution mechanisms of human DNA polymerase beta
To Be Published
4PGX
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BU of 4pgx by Molmil
Structure of human DNA polymerase beta complexed with G in the template base paired with incoming non-hydrolyzable TTP and MANGANESE
分子名称: 5'-O-[(R)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]thymidine, DNA (5'-D(*CP*CP*GP*AP*CP*GP*TP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3'), DNA (5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*A)-3'), ...
著者Koag, M.C, Lee, S.
登録日2014-05-03
公開日2014-09-24
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.077 Å)
主引用文献The spontaneous replication error and the mismatch discrimination mechanisms of human DNA polymerase beta.
Nucleic Acids Res., 42, 2015
4PH5
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BU of 4ph5 by Molmil
Structure of human DNA polymerase beta complexed with a nicked DNA containing a AC at N-1 position and GC at N position
分子名称: DNA (5'-D(*CP*CP*GP*AP*CP*GP*AP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3'), DNA (5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*CP*C)-3'), DNA (5'-D(P*GP*TP*CP*GP*G)-3'), ...
著者Koag, M.C, Lee, S.
登録日2014-05-04
公開日2015-05-06
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献The spontaneous base substitution mechanisms of human DNA polymerase beta
To Be Published
4PHD
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BU of 4phd by Molmil
Structure of human DNA polymerase beta complexed with A in the template base paired with incoming non-hydrolyzable CTP and MANGANESE
分子名称: 2'-deoxy-5'-O-[(R)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]cytidine, DNA (5'-D(*CP*CP*GP*AP*CP*AP*TP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3'), DNA (5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*A)-3'), ...
著者Koag, M.C, Lee, S.
登録日2014-05-06
公開日2014-09-24
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.21 Å)
主引用文献The spontaneous replication error and the mismatch discrimination mechanisms of human DNA polymerase beta.
Nucleic Acids Res., 42, 2015
4F4B
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BU of 4f4b by Molmil
Structure of OSH4 with a cholesterol analog
分子名称: (3beta,9beta,25R)-3-hydroxy-26-iodocholest-5-ene-16,22-dione, Protein KES1
著者Koag, M.C, Monzingo, A.F, Cheun, Y, Lee, S.
登録日2012-05-10
公開日2013-05-15
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.87 Å)
主引用文献Synthesis and structure of 16,22-diketocholesterol bound to oxysterol-binding protein Osh4.
Steroids, 78, 2013
4FD2
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BU of 4fd2 by Molmil
Crystal structure of the C-terminal domain of ClpB
分子名称: ADENOSINE-5'-DIPHOSPHATE, Chaperone protein ClpB
著者Biter, A.B, Lee, S, Sung, N, Tsai, F.T.F.
登録日2012-05-25
公開日2012-07-18
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Structural basis for intersubunit signaling in a protein disaggregating machine.
Proc.Natl.Acad.Sci.USA, 109, 2012
4FCV
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BU of 4fcv by Molmil
Crystal structure of the C-terminal domain of ClpB
分子名称: ADENOSINE-5'-DIPHOSPHATE, Chaperone protein ClpB
著者Biter, A.B, Lee, S, Sung, N, Tsai, F.T.F.
登録日2012-05-25
公開日2012-07-18
最終更新日2012-08-22
実験手法X-RAY DIFFRACTION (3.4 Å)
主引用文献Structural basis for intersubunit signaling in a protein disaggregating machine.
Proc.Natl.Acad.Sci.USA, 109, 2012
7VG4
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BU of 7vg4 by Molmil
10,5-methenyltetrahydrofolate cyclohydrolase from Methylobacterium extorquens AM1 strain
分子名称: Methenyltetrahydrofolate cyclohydrolase
著者Kim, S, Lee, S, Kim, I.-K, Seo, H, Kim, K.-J.
登録日2021-09-14
公開日2022-07-06
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.77 Å)
主引用文献Structural insight into a molecular mechanism of methenyltetrahydrofolate cyclohydrolase from Methylobacterium extorquens AM1.
Int.J.Biol.Macromol., 202, 2022
7VG5
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BU of 7vg5 by Molmil
10,5-methenyltetrahydrofolate cyclohydrolase from Methylobacterium extorquens AM1 with tetrahydrofolate
分子名称: (6S)-5,6,7,8-TETRAHYDROFOLATE, Methenyltetrahydrofolate cyclohydrolase
著者Kim, S, Lee, S, Kim, I.-K, Seo, H, Kim, K.-J.
登録日2021-09-14
公開日2022-07-06
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Structural insight into a molecular mechanism of methenyltetrahydrofolate cyclohydrolase from Methylobacterium extorquens AM1.
Int.J.Biol.Macromol., 202, 2022
6MXO
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BU of 6mxo by Molmil
Structure of HPoleta incorporating dCTP opposite the 3-prime Pt(DACH)-GG
分子名称: (cyclohex-1-ene-1,2-diamine)platinum(2+), 2'-deoxy-5'-O-[(R)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]cytidine, DNA (5'-D(*AP*CP*GP*GP*CP*TP*CP*AP*CP*AP*CP*T)-3'), ...
著者Ouzon-Shubeita, H, Lee, S.
登録日2018-10-31
公開日2019-02-13
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.04 Å)
主引用文献Structural basis for the bypass of the major oxaliplatin-DNA adducts by human DNA polymerase eta.
Biochem. J., 476, 2019
6MP3
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BU of 6mp3 by Molmil
Binary structure of DNA polymerase eta in complex with templating hypoxanthine
分子名称: DNA (5'-D(*AP*GP*CP*GP*TP*CP*AP*T)-3'), DNA (5'-D(*CP*AP*TP*IP*AP*TP*GP*AP*CP*GP*CP*T)-3'), DNA polymerase eta, ...
著者Hawkins, M.A, Jung, H, Lee, S.
登録日2018-10-05
公開日2019-10-16
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.907 Å)
主引用文献Structural Analysis of Translesion Synthesis Across Hypoxanthine Lesion Using Human DNA Polymerase Eta
To Be Published
6MQ8
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BU of 6mq8 by Molmil
Binary structure of DNA polymerase eta in complex with templating hypoxanthine
分子名称: 2'-deoxy-5'-O-[(R)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]cytidine, DNA (5'-D(*AP*GP*CP*GP*TP*CP*AP*T)-3'), DNA (5'-D(*CP*AP*TP*IP*AP*TP*GP*AP*CP*GP*CP*T)-3'), ...
著者Hawkins, M.A, Jung, H, Lee, S.
登録日2018-10-09
公開日2019-10-23
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.969 Å)
主引用文献Structural insights into the bypass of the major deaminated purines by translesion synthesis DNA polymerase.
Biochem.J., 2020
6NFJ
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BU of 6nfj by Molmil
Structure of Beta-Klotho in Complex with FGF19 C-terminal peptide
分子名称: Beta-klotho, Fibroblast growth factor 19, Nanobody 30
著者Kuzina, E, Schlessinger, J, Lee, S.
登録日2018-12-20
公開日2019-04-03
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (3.19 Å)
主引用文献Structures of ligand-occupied beta-Klotho complexes reveal a molecular mechanism underlying endocrine FGF specificity and activity.
Proc. Natl. Acad. Sci. U.S.A., 116, 2019
6CU9
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BU of 6cu9 by Molmil
Structure of human DNA polymerase beta complexed with 8-ClG in the template base paired with incoming non-hydrolyzable CTP and MANGANESE
分子名称: 2'-deoxy-5'-O-[(R)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]cytidine, DNA (5'-D(*CP*CP*GP*AP*CP*(CGM)P*TP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3'), DNA (5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*A)-3'), ...
著者Koag, M.-C, Lee, S.
登録日2018-03-24
公開日2019-03-27
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.04 Å)
主引用文献Structure of human DNA polymerase beta complexed with 8-ClG in the template base paired with incoming non-hydrolyzable CTP and MANGANESE
To Be Published
6CLY
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BU of 6cly by Molmil
Structure of human DNA polymerase beta complexed with 8-ClG as the template base in a 1-nucleotide gapped DNA
分子名称: DNA (5'-D(*CP*CP*GP*AP*CP*(CGM)P*TP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3'), DNA (5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*A)-3'), DNA (5'-D(P*GP*TP*CP*GP*G)-3'), ...
著者Koag, M.-C, Lee, S.
登録日2018-03-02
公開日2019-03-06
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.186 Å)
主引用文献Structure of human DNA polymerase beta complexed with 8-ClG as the template base in a 1-nucleotide gapped DNA
To Be Published

224004

件を2024-08-21に公開中

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