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PDB: 784 件

7BZ1
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The mutant variant of PNGM-1. H96 was substituted for alanine to study metal coordination.
分子名称: Metallo-beta-lactamase PNGM-1, ZINC ION
著者Park, Y.S, Kang, L.W, Lee, J.H.
登録日2020-04-26
公開日2021-04-28
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.45 Å)
主引用文献Structural Study of Metal Binding and Coordination in Ancient Metallo-beta-Lactamase PNGM-1 Variants.
Int J Mol Sci, 21, 2020
7BZI
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The mutant variant of PNGM-1. H91 was substituted for alanine to study metal coordination.
分子名称: Metallo-beta-lactamase PNGM-1, ZINC ION
著者Park, Y.S, Kang, L.W, Lee, J.H.
登録日2020-04-28
公開日2021-04-28
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.94 Å)
主引用文献Structural Study of Metal Binding and Coordination in Ancient Metallo-beta-Lactamase PNGM-1 Variants.
Int J Mol Sci, 21, 2020
7BZ3
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The mutant variant of PNGM-1. H257 was substituted for alanine to study substrate binding.
分子名称: Metallo-beta-lactamase PNGM-1, ZINC ION
著者Park, Y.S, Kang, L.W, Lee, J.H.
登録日2020-04-26
公開日2021-04-28
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural Study of Metal Binding and Coordination in Ancient Metallo-beta-Lactamase PNGM-1 Variants.
Int J Mol Sci, 21, 2020
4XCS
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Human peroxiredoxin-1 C83S mutant
分子名称: 3-[(3-CHOLAMIDOPROPYL)DIMETHYLAMMONIO]-1-PROPANESULFONATE, GLYCEROL, Peroxiredoxin-1
著者Cho, K.J, Lee, J.-H, Khan, T.G, Park, Y, Cho, A, Chang, T.-S, Kim, K.H.
登録日2014-12-18
公開日2016-01-13
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal Structure of Dimeric Human Peroxiredoxin-1 C83S Mutant
Bull.Korean Chem.Soc., 36, 2015
6ILB
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Native crystal structure of fructuronate-tagaturonate epimerase UxaE from Cohnella laeviribosi
分子名称: 1,2-ETHANEDIOL, Fructuronate-tagaturonate epimerase UxaE, MANGANESE (II) ION
著者Choi, M.Y, Kang, L.W, Ho, T.H, Nguyen, D.Q, Lee, I.H, Lee, J.H, Park, Y.S, Park, H.J.
登録日2018-10-17
公開日2019-10-23
実験手法X-RAY DIFFRACTION (2.51 Å)
主引用文献Crystal structure of fructuronate-tagaturonate epimerase UxaE from Cohnella laeviribosi
To be published
6ILA
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Two Glycerol complexed Crystal structure of fructuronate-tagaturonate epimerase UxaE from Cohnella laeviribosi
分子名称: Fructuronate-tagaturonate epimerase UxaE, GLYCEROL, PHOSPHATE ION, ...
著者Choi, M.Y, Kang, L.W, Ho, T.H, Nguyen, D.Q, Lee, I.H, Lee, J.H, Park, Y.S, Park, H.J.
登録日2018-10-17
公開日2019-10-23
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.69 Å)
主引用文献Crystal structure of fructuronate-tagaturonate epimerase UxaE from Cohnella laeviribosi
To be published
6IL9
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One Glycerol complexed Crystal structure of fructuronate-tagaturonate epimerase UxaE from Cohnella laeviribosi
分子名称: Fructuronate-tagaturonate epimerase UxaE from Cohnella laeviribosi in complex with 1 glycerol, GLYCEROL, ZINC ION
著者Choi, M.Y, Kang, L.W, Ho, T.H, Nguyen, D.Q, Lee, I.H, Lee, J.H, Park, Y.S, Park, H.J.
登録日2018-10-17
公開日2019-10-23
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.72005355 Å)
主引用文献Crystal structure of fructuronate-tagaturonate epimerase UxaE from Cohnella laeviribosi
To Be Published
1C2A
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CRYSTAL STRUCTURE OF BARLEY BBI
分子名称: BOWMAN-BIRK TRYPSIN INHIBITOR
著者Song, H.K, Kim, Y.S, Yang, J.K, Moon, J, Lee, J.Y, Suh, S.W.
登録日1999-07-23
公開日1999-12-29
最終更新日2022-12-21
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal structure of a 16 kDa double-headed Bowman-Birk trypsin inhibitor from barley seeds at 1.9 A resolution.
J.Mol.Biol., 293, 1999
1BV2
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LIPID TRANSFER PROTEIN FROM RICE SEEDS, NMR, 14 STRUCTURES
分子名称: NONSPECIFIC LIPID TRANSFER PROTEIN
著者Poznanski, J, Sodano, P, Suh, S.W, Lee, J.Y, Ptak, M, Vovelle, F.
登録日1998-09-21
公開日1999-05-18
最終更新日2022-02-16
実験手法SOLUTION NMR
主引用文献Solution structure of a lipid transfer protein extracted from rice seeds. Comparison with homologous proteins.
Eur.J.Biochem., 259, 1999
1EW4
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CRYSTAL STRUCTURE OF ESCHERICHIA COLI CYAY PROTEIN REVEALS A NOVEL FOLD FOR THE FRATAXIN FAMILY
分子名称: CYAY PROTEIN
著者Suh, S.W, Cho, S, Lee, M.G, Yang, J.K, Lee, J.Y, Song, H.K.
登録日2000-04-22
公開日2000-08-09
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Crystal structure of Escherichia coli CyaY protein reveals a previously unidentified fold for the evolutionarily conserved frataxin family.
Proc.Natl.Acad.Sci.USA, 97, 2000
8VBW
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Structure of the monofunctional Staphylococcus aureus PBP1 in its beta-lactam (Ertapenem) inhibited form
分子名称: (4R,5S)-3-({(3S,5S)-5-[(3-carboxyphenyl)carbamoyl]pyrrolidin-3-yl}sulfanyl)-5-[(1S,2R)-1-formyl-2-hydroxypropyl]-4-methyl-4,5-dihydro-1H-pyrrole-2-carboxylic acid, Penicillin-binding protein 1
著者Bon, C.G, Lee, J, Caveney, N.A, Strynadka, N.C.J.
登録日2023-12-12
公開日2024-05-01
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structural and kinetic analysis of the monofunctional Staphylococcus aureus PBP1.
J.Struct.Biol., 216, 2024
8VBT
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BU of 8vbt by Molmil
Structure of the monofunctional Staphylococcus aureus PBP1 in its apo form
分子名称: Penicillin-binding protein 1
著者Bon, C.G, Lee, J, Caveney, N.A, Strynadka, N.C.J.
登録日2023-12-12
公開日2024-05-01
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural and kinetic analysis of the monofunctional Staphylococcus aureus PBP1.
J.Struct.Biol., 216, 2024
8VBU
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Structure of the monofunctional Staphylococcus aureus PBP1 in its beta-lactam (Oxacillin) inhibited form
分子名称: (2R,4S)-5,5-dimethyl-2-[(1R)-1-{[(5-methyl-3-phenyl-1,2-oxazol-4-yl)carbonyl]amino}-2-oxoethyl]-1,3-thiazolidine-4-carb oxylic acid, Penicillin-binding protein 1
著者Bon, C.G, Lee, J, Caveney, N.A, Strynadka, N.C.J.
登録日2023-12-12
公開日2024-05-01
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural and kinetic analysis of the monofunctional Staphylococcus aureus PBP1.
J.Struct.Biol., 216, 2024
8VBV
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Structure of the monofunctional Staphylococcus aureus PBP1 in its beta-lactam (Cephalexin) inhibited form
分子名称: (2S)-2-[(1R)-1-{[(2R)-2-amino-2-phenylacetyl]amino}-2-oxoethyl]-5-methyl-3,6-dihydro-2H-1,3-thiazine-4-carboxylic acid, Penicillin-binding protein 1
著者Bon, C.G, Lee, J, Caveney, N.A, Strynadka, N.C.J.
登録日2023-12-12
公開日2024-05-01
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structural and kinetic analysis of the monofunctional Staphylococcus aureus PBP1.
J.Struct.Biol., 216, 2024
8HG9
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Cytochrome P450 steroid hydroxylase (BaCYP106A6) from Bacillus species
分子名称: PROTOPORPHYRIN IX CONTAINING FE, cytochrome P450 steroid hydroxylase
著者Do, H, Lee, J.H.
登録日2022-11-14
公開日2023-07-26
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (2.79 Å)
主引用文献Crystal Structure and Biochemical Analysis of a Cytochrome P450 Steroid Hydroxylase ( Ba CYP106A6) from Bacillus Species.
J Microbiol Biotechnol., 33, 2023
8HU2
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Rattus Syntenin-1 PDZ domain with inhibitor
分子名称: (2~{S})-2-(9~{H}-fluoren-9-ylmethoxycarbonylamino)-3-(4-oxidanylidene-5~{H}-pyrimidin-2-yl)propanoic acid, Syntenin-1
著者Heo, Y, Lee, J, Yun, J.H, Lee, W.
登録日2022-12-22
公開日2024-01-17
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Crystal structure of STNPDZ with inhibitor at 1.60 Angstroms resolution.
To Be Published
8J1Q
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CryoEM structure of SARS CoV-2 RBD and Aptamer complex
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, AM032-0, AM047-0, ...
著者Rahman, M.S, Jang, S.K, Lee, J.O.
登録日2023-04-13
公開日2023-06-21
最終更新日2023-07-12
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Structure-Guided Development of Bivalent Aptamers Blocking SARS-CoV-2 Infection.
Molecules, 28, 2023
8J26
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CryoEM structure of SARS CoV-2 RBD and Aptamer complex
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, AM032-4, AM047-6, ...
著者Rahman, M.S, Jang, S.K, Lee, J.O.
登録日2023-04-14
公開日2023-06-21
最終更新日2023-07-12
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Structure-Guided Development of Bivalent Aptamers Blocking SARS-CoV-2 Infection.
Molecules, 28, 2023
7NFX
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Mammalian ribosome nascent chain complex with SRP and SRP receptor in early state A
分子名称: 28S ribosomal RNA, 5.8S ribosomal RNA, 5S ribosomal RNA, ...
著者Jomaa, A, Lee, J.H, Shan, S, Ban, N.
登録日2021-02-08
公開日2021-06-02
最終更新日2024-05-01
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Receptor compaction and GTPase rearrangement drive SRP-mediated cotranslational protein translocation into the ER.
Sci Adv, 7, 2021
1HZ3
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ALZHEIMER'S DISEASE AMYLOID-BETA PEPTIDE (RESIDUES 10-35)
分子名称: A-BETA AMYLOID
著者Zhang, S, Iwata, K, Lachenmann, M.J, Peng, J.W, Li, S, Stimson, E.R, Lu, Y, Felix, A.M, Maggio, J.E, Lee, J.P.
登録日2001-01-23
公開日2001-01-31
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献The Alzheimer's peptide a beta adopts a collapsed coil structure in water.
J.Struct.Biol., 130, 2000
1MNL
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HIGH-RESOLUTION SOLUTION STRUCTURE OF A SWEET PROTEIN SINGLE-CHAIN MONELLIN (SCM) DETERMINED BY NUCLEAR MAGNETIC RESONANCE SPECTROSCOPY AND DYNAMICAL SIMULATED ANNEALING CALCULATIONS, 21 STRUCTURES
分子名称: MONELLIN
著者Lee, S.-Y, Lee, J.-H, Chang, H.-J, Jo, J.-M, Jung, J.-W, Lee, W.
登録日1998-08-06
公開日1999-06-08
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Solution structure of a sweet protein single-chain monellin determined by nuclear magnetic resonance and dynamical simulated annealing calculations.
Biochemistry, 38, 1999
2WH9
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Solution structure of GxTX-1E
分子名称: GUANGXITOXIN-1EGXTX-1E
著者Lee, S.K, Jung, H.H, Lee, J.Y, Lee, C.W, Kim, J.I.
登録日2009-05-02
公開日2010-05-26
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献Solution Structure of Gxtx-1E, a High Affinity Tarantula Toxin Interacting with Voltage Sensors in Kv2.1 Potassium Channels.
Biochemistry, 49, 2010
1WWL
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Crystal structure of CD14
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Monocyte differentiation antigen CD14
著者Kim, J.-I, Lee, C.J, Jin, M.S, Lee, C.-H, Paik, S.-G, Lee, H, Lee, J.-O.
登録日2005-01-06
公開日2005-02-22
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal Structure of CD14 and Its Implications for Lipopolysaccharide Signaling
J.Biol.Chem., 280, 2005
1S36
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Crystal structure of a Ca2+-discharged photoprotein: Implications for the mechanisms of the calcium trigger and the bioluminescence
分子名称: CHLORIDE ION, GLYCEROL, N-[3-BENZYL-5-(4-HYDROXYPHENYL)PYRAZIN-2-YL]-2-(4-HYDROXYPHENYL)ACETAMIDE, ...
著者Deng, L, Markova, S.V, Vysotski, E.S, Liu, Z.-J, Lee, J, Rose, J, Wang, B.-C, Southeast Collaboratory for Structural Genomics (SECSG)
登録日2004-01-12
公開日2004-10-05
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (1.96 Å)
主引用文献Crystal structure of a Ca2+-discharged photoprotein: implications for mechanisms of the calcium trigger and bioluminescence
J.Biol.Chem., 279, 2004
1UDT
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Crystal structure of Human Phosphodiesterase 5 complexed with Sildenafil(Viagra)
分子名称: 5-{2-ETHOXY-5-[(4-METHYLPIPERAZIN-1-YL)SULFONYL]PHENYL}-1-METHYL-3-PROPYL-1H,6H,7H-PYRAZOLO[4,3-D]PYRIMIDIN-7-ONE, MAGNESIUM ION, ZINC ION, ...
著者Sung, B.-J, Lee, J.I, Heo, Y.-S, Kim, J.H, Moon, J, Yoon, J.M, Hyun, Y.-L, Kim, E, Eum, S.J, Lee, T.G, Cho, J.M, Park, S.-Y, Lee, J.-O, Jeon, Y.H, Hwang, K.Y, Ro, S.
登録日2003-05-06
公開日2004-05-11
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structure of the catalytic domain of human phosphodiesterase 5 with bound drug molecules
Nature, 425, 2003

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