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PDB: 787 results

1X3Z
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Structure of a peptide:N-glycanase-Rad23 complex
Descriptor: UV excision repair protein RAD23, ZINC ION, beta-D-fructofuranose-(2-1)-alpha-D-glucopyranose, ...
Authors:Lee, J.-H, Choi, J.M, Lee, C, Yi, K.J, Cho, Y.
Deposit date:2005-05-11
Release date:2005-06-14
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structure of a peptide:N-glycanase-Rad23 complex: insight into the deglycosylation for denatured glycoproteins.
Proc.Natl.Acad.Sci.Usa, 102, 2005
1X3W
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BU of 1x3w by Molmil
Structure of a peptide:N-glycanase-Rad23 complex
Descriptor: UV excision repair protein RAD23, ZINC ION, beta-D-fructofuranose-(2-1)-alpha-D-glucopyranose, ...
Authors:Lee, J.-H, Choi, J.M, Lee, C, Yi, K.J, Cho, Y.
Deposit date:2005-05-11
Release date:2005-06-14
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structure of a peptide:N-glycanase-Rad23 complex: insight into the deglycosylation for denatured glycoproteins.
Proc.Natl.Acad.Sci.Usa, 102, 2005
8WP9
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BU of 8wp9 by Molmil
Small-heat shock protein from Methanocaldococcus jannaschii, Hsp16.5
Descriptor: Small heat shock protein HSP16.5
Authors:Lee, J, Ryu, B, Kim, T, Kim, K.K.
Deposit date:2023-10-09
Release date:2023-12-27
Method:ELECTRON MICROSCOPY (2.49 Å)
Cite:Cryo-EM structure of a 16.5-kDa small heat-shock protein from Methanocaldococcus jannaschii.
Int.J.Biol.Macromol., 258, 2024
3C4B
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BU of 3c4b by Molmil
Structure of RNaseIIIb and dsRNA binding domains of mouse Dicer
Descriptor: Endoribonuclease Dicer
Authors:Lee, J.K, Du, Z, Tjhen, R.J, Stroud, R.M, James, T.L.
Deposit date:2008-01-29
Release date:2008-02-19
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.68 Å)
Cite:Structural and biochemical insights into the dicing mechanism of mouse Dicer: A conserved lysine is critical for dsRNA cleavage.
Proc.Natl.Acad.Sci.Usa, 105, 2008
3C4T
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BU of 3c4t by Molmil
Structure of RNaseIIIb and dsRNA binding domains of mouse Dicer
Descriptor: CADMIUM ION, Endoribonuclease Dicer
Authors:Lee, J.K, Du, Z, Tjhen, R.J, Stroud, R.M, James, T.L.
Deposit date:2008-01-30
Release date:2008-02-19
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structural and biochemical insights into the dicing mechanism of mouse Dicer: A conserved lysine is critical for dsRNA cleavage.
Proc.Natl.Acad.Sci.Usa, 105, 2008
1MQV
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BU of 1mqv by Molmil
Crystal Structure of the Q1A/F32W/W72F mutant of Rhodopseudomonas palustris cytochrome c' (prime) expressed in E. coli
Descriptor: CYTOCHROME C', HEME C
Authors:Lee, J.C, Engman, K.C, Tezcan, F.A, Gray, H.B, Winkler, J.R.
Deposit date:2002-09-17
Release date:2002-11-20
Last modified:2021-10-27
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:Structural Features of Cytochrome c' Folding Intermediates Revealed by Fluorescence Energy-Transfer Kinetics
Proc.Natl.Acad.Sci.USA, 99, 2002
5FUU
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BU of 5fuu by Molmil
Ectodomain of cleaved wild type JR-FL EnvdCT trimer in complex with PGT151 Fab
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Lee, J.H, Ward, A.B.
Deposit date:2016-01-29
Release date:2016-03-09
Last modified:2020-07-29
Method:ELECTRON MICROSCOPY (4.2 Å)
Cite:Cryo-Em Structure of a Native, Fully Glycosylated and Cleaved HIV-1 Envelope Trimer
Science, 351, 2016
2G3R
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BU of 2g3r by Molmil
Crystal Structure of 53BP1 tandem tudor domains at 1.2 A resolution
Descriptor: SULFATE ION, Tumor suppressor p53-binding protein 1
Authors:Lee, J, Botuyan, M.V, Thompson, J.R, Mer, G.
Deposit date:2006-02-20
Release date:2007-01-02
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Structural Basis for the Methylation State-Specific Recognition of Histone H4-K20 by 53BP1 and Crb2 in DNA Repair.
Cell(Cambridge,Mass.), 127, 2006
4MRV
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BU of 4mrv by Molmil
Structure of a bacterial Atm1-family ABC transporter
Descriptor: ABC transporter related protein, LAURYL DIMETHYLAMINE-N-OXIDE, PHOSPHATE ION, ...
Authors:Lee, J.Y, Yang, J.G, Zhitnitsky, D, Lewinson, O, Rees, D.C.
Deposit date:2013-09-17
Release date:2014-03-19
Last modified:2019-07-17
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural basis for heavy metal detoxification by an Atm1-type ABC exporter.
Science, 343, 2014
2QQR
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BU of 2qqr by Molmil
JMJD2A hybrid tudor domains
Descriptor: JmjC domain-containing histone demethylation protein 3A, SULFATE ION
Authors:Lee, J, Botuyan, M.V, Mer, G.
Deposit date:2007-07-26
Release date:2007-12-11
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Distinct binding modes specify the recognition of methylated histones H3K4 and H4K20 by JMJD2A-tudor.
Nat.Struct.Mol.Biol., 15, 2008
4MRP
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BU of 4mrp by Molmil
Structure of a bacterial Atm1-family ABC transporter
Descriptor: ABC transporter related protein, GLUTATHIONE, LAURYL DIMETHYLAMINE-N-OXIDE, ...
Authors:Lee, J.Y, Yang, J.G, Zhitnitsky, D, Lewinson, O, Rees, D.C.
Deposit date:2013-09-17
Release date:2014-03-19
Last modified:2019-07-17
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural basis for heavy metal detoxification by an Atm1-type ABC exporter.
Science, 343, 2014
4MVD
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BU of 4mvd by Molmil
Crystal Structure of a Mammalian Cytidylyltransferase
Descriptor: Choline-phosphate cytidylyltransferase A, [2-CYTIDYLATE-O'-PHOSPHONYLOXYL]-ETHYL-TRIMETHYL-AMMONIUM
Authors:Lee, J, Cornell, R.B.
Deposit date:2013-09-23
Release date:2013-12-11
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (8 Å)
Cite:Structural Basis for Autoinhibition of CTP:Phosphocholine Cytidylyltransferase (CCT), the Regulatory Enzyme in Phosphatidylcholine Synthesis, by Its Membrane-binding Amphipathic Helix.
J.Biol.Chem., 289, 2014
2QQS
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BU of 2qqs by Molmil
JMJD2A tandem tudor domains in complex with a trimethylated histone H4-K20 peptide
Descriptor: JmjC domain-containing histone demethylation protein 3A, METHYLATED HISTONE H4 PEPTIDE
Authors:Lee, J, Botuyan, M.V, Mer, G.
Deposit date:2007-07-26
Release date:2007-12-11
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.82 Å)
Cite:Distinct binding modes specify the recognition of methylated histones H3K4 and H4K20 by JMJD2A-tudor.
Nat.Struct.Mol.Biol., 15, 2008
4MVC
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BU of 4mvc by Molmil
Crystal Structure of a Mammalian Cytidylyltransferase
Descriptor: Choline-phosphate cytidylyltransferase A, [2-CYTIDYLATE-O'-PHOSPHONYLOXYL]-ETHYL-TRIMETHYL-AMMONIUM
Authors:Lee, J, Cornell, R.B.
Deposit date:2013-09-23
Release date:2013-12-11
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structural Basis for Autoinhibition of CTP:Phosphocholine Cytidylyltransferase (CCT), the Regulatory Enzyme in Phosphatidylcholine Synthesis, by Its Membrane-binding Amphipathic Helix.
J.Biol.Chem., 289, 2014
6KTA
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BU of 6kta by Molmil
Crystal structure of B. halodurans MntR in apo form
Descriptor: GLYCEROL, HTH-type transcriptional regulator MntR
Authors:Lee, J.Y, Lee, M.Y.
Deposit date:2019-08-26
Release date:2019-12-04
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural analysis of the manganese transport regulator MntR from Bacillus halodurans in apo and manganese bound forms.
Plos One, 14, 2019
2QZX
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BU of 2qzx by Molmil
Secreted aspartic proteinase (Sap) 5 from Candida albicans
Descriptor: Candidapepsin-5, Pepstatin
Authors:Lee, J.H, Ruge, E, Borelli, C, Maskos, K, Huber, R.
Deposit date:2007-08-17
Release date:2008-07-08
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:X-ray structures of Sap1 and Sap5: Structural comparison of the secreted aspartic proteinases from Candida albicans.
Proteins, 72, 2008
6Z6P
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BU of 6z6p by Molmil
HDAC-PC-Nuc
Descriptor: DNA (145-MER), HDA1 complex subunit 2, HDA1 complex subunit 3,HDA1 complex subunit 3, ...
Authors:Lee, J.-H, Bollschweiler, D, Schaefer, T, Huber, R.
Deposit date:2020-05-28
Release date:2021-02-17
Method:ELECTRON MICROSCOPY (4.43 Å)
Cite:Structural basis for the regulation of nucleosome recognition and HDAC activity by histone deacetylase assemblies.
Sci Adv, 7, 2021
6E8C
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BU of 6e8c by Molmil
Crystal structure of the double homeodomain of DUX4 in complex with DNA
Descriptor: DNA (5'-D(*GP*CP*GP*TP*AP*AP*TP*CP*TP*AP*AP*TP*CP*AP*AP*CP*A)-3'), DNA (5'-D(*TP*GP*TP*TP*GP*AP*TP*TP*AP*GP*AP*TP*TP*AP*CP*GP*C)-3'), Double homeobox protein 4
Authors:Lee, J.K, Bosnakovski, D, Toso, E.A, Dinh, T, Banerjee, S, Bohl, T.E, Shi, K, Kurahashi, K, Kyba, M, Aihara, H.
Deposit date:2018-07-27
Release date:2018-12-26
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.12 Å)
Cite:Crystal Structure of the Double Homeodomain of DUX4 in Complex with DNA.
Cell Rep, 25, 2018
6Z6O
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BU of 6z6o by Molmil
HDAC-TC
Descriptor: HDA1 complex subunit 2, HDA1 complex subunit 3,HDA1 complex subunit 3, Histone deacetylase HDA1, ...
Authors:Lee, J.-H, Bollschweiler, D, Schaefer, T, Huber, R.
Deposit date:2020-05-28
Release date:2021-02-17
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Structural basis for the regulation of nucleosome recognition and HDAC activity by histone deacetylase assemblies.
Sci Adv, 7, 2021
6Z6H
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BU of 6z6h by Molmil
HDAC-DC
Descriptor: HDA1 complex subunit 2, HDA1 complex subunit 3,HDA1 complex subunit 3, Histone deacetylase HDA1, ...
Authors:Lee, J.-H, Bollschweiler, D, Schaefer, T, Huber, R.
Deposit date:2020-05-28
Release date:2021-02-17
Method:ELECTRON MICROSCOPY (8.55 Å)
Cite:Structural basis for the regulation of nucleosome recognition and HDAC activity by histone deacetylase assemblies.
Sci Adv, 7, 2021
2R64
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BU of 2r64 by Molmil
Crystal structure of a 3-aminoindazole compound with CDK2
Descriptor: Cell division protein kinase 2, N-[5-(1,1-DIOXIDOISOTHIAZOLIDIN-2-YL)-1H-INDAZOL-3-YL]-2-(4-PIPERIDIN-1-YLPHENYL)ACETAMIDE
Authors:Lee, J, Choi, H, Kim, K.H, Jeong, S, Park, J.W, Baek, C.S, Lee, S.H.
Deposit date:2007-09-05
Release date:2008-09-09
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Synthesis and biological evaluation of 3,5-diaminoindazoles as cyclin-dependent kinase inhibitors.
Bioorg.Med.Chem.Lett., 18, 2008
6Z6F
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BU of 6z6f by Molmil
HDAC-PC
Descriptor: HDA1 complex subunit 2, HDA1 complex subunit 3,HDA1 complex subunit 3, Histone deacetylase HDA1, ...
Authors:Lee, J.-H, Bollschweiler, D, Schaefer, T, Huber, R.
Deposit date:2020-05-28
Release date:2021-02-17
Method:ELECTRON MICROSCOPY (3.11 Å)
Cite:Structural basis for the regulation of nucleosome recognition and HDAC activity by histone deacetylase assemblies.
Sci Adv, 7, 2021
4OWI
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BU of 4owi by Molmil
peptide structure
Descriptor: p53LZ2
Authors:Lee, J.-H.
Deposit date:2014-02-02
Release date:2014-05-21
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.202 Å)
Cite:Protein grafting of p53TAD onto a leucine zipper scaffold generates a potent HDM dual inhibitor.
Nat Commun, 5, 2014
5XGX
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BU of 5xgx by Molmil
Crystal structure of colwellia psychrerythraea strain 34H isoaspartyl dipeptidase E80Q mutant complexed with beta-isoaspartyl lysine
Descriptor: D-ASPARTIC ACID, D-LYSINE, Isoaspartyl dipeptidase, ...
Authors:Lee, J.H, Lee, C.W, Park, S.H.
Deposit date:2017-04-18
Release date:2018-02-28
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.33 Å)
Cite:Crystal structure and functional characterization of an isoaspartyl dipeptidase (CpsIadA) from Colwellia psychrerythraea strain 34H.
PLoS ONE, 12, 2017
5YL7
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BU of 5yl7 by Molmil
Proteases from Pseudoalteromonas arctica PAMC 21717 (Pro21717)
Descriptor: CALCIUM ION, Copurified unknown peptide, Pseudoalteromonas arctica PAMC 21717
Authors:Lee, J.H, Lee, C.W.
Deposit date:2017-10-17
Release date:2018-01-31
Last modified:2018-09-12
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Crystal structure of a cold-active protease (Pro21717) from the psychrophilic bacterium, Pseudoalteromonas arctica PAMC 21717, at 1.4 angstrom resolution: Structural adaptations to cold and functional analysis of a laundry detergent enzyme
PLoS ONE, 13, 2018

221051

PDB entries from 2024-06-12

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