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PDB: 439 results

4ZTT
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Crystal structures of ferritin mutants reveal diferric-peroxo intermediates
Descriptor: FE (II) ION, FE (III) ION, GLYCEROL, ...
Authors:Kim, S, Park, Y.H, Jung, S.W, Seok, J.H, Chung, Y.B, Lee, D.B, Gowda, G, Lee, J.H, Han, H.R, Cho, A.E, Lee, C, Chung, M.S, Kim, K.H.
Deposit date:2015-05-15
Release date:2016-06-15
Last modified:2024-10-02
Method:X-RAY DIFFRACTION (1.83 Å)
Cite:Structural Basis of Novel Iron-Uptake Route and Reaction Intermediates in Ferritins from Gram-Negative Bacteria.
J. Mol. Biol., 428, 2016
5Z2E
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BU of 5z2e by Molmil
Dipicolinate bound Dihydrodipicolinate reductase from Paenisporosarcina sp. TG-14
Descriptor: Dihydrodipicolinate reductase, PYRIDINE-2,6-DICARBOXYLIC ACID
Authors:Lee, J.H, Lee, C.W, Park, S.
Deposit date:2018-01-02
Release date:2018-06-27
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of dihydrodipicolinate reductase (PaDHDPR) from Paenisporosarcina sp. TG-14: structural basis for NADPH preference as a cofactor
Sci Rep, 8, 2018
5Z2F
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BU of 5z2f by Molmil
NADPH/PDA bound Dihydrodipicolinate reductase from Paenisporosarcina sp. TG-14
Descriptor: Dihydrodipicolinate reductase, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, PYRIDINE-2,6-DICARBOXYLIC ACID
Authors:Lee, J.H, Lee, C.W, Park, S.
Deposit date:2018-01-02
Release date:2018-06-27
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of dihydrodipicolinate reductase (PaDHDPR) from Paenisporosarcina sp. TG-14: structural basis for NADPH preference as a cofactor
Sci Rep, 8, 2018
6II0
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BU of 6ii0 by Molmil
Crystal structure of the Makes Caterpillars Floppy (MCF)-Like effector of Vibrio vulnificus MO6-24/O
Descriptor: GLYCEROL, Putative RTX-toxin
Authors:Lee, Y, Kim, B.S, Choi, S, Lee, E.Y, Park, S, Hwang, J, Kwon, Y, Hyun, J, Lee, C, Eom, S.H, Kim, M.H.
Deposit date:2018-10-03
Release date:2019-08-07
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.36 Å)
Cite:Makes caterpillars floppy-like effector-containing MARTX toxins require host ADP-ribosylation factor (ARF) proteins for systemic pathogenicity.
Proc.Natl.Acad.Sci.USA, 116, 2019
6II6
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Crystal structure of the Makes Caterpillars Floppy (MCF)-Like effector of Vibrio vulnificus MO6-24/O in complex with a human ADP-ribosylation factor 3 (ARF3)
Descriptor: ADP-ribosylation factor 3, GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
Authors:Lee, Y, Kim, B.S, Choi, S, Lee, E.Y, Park, S, Hwang, J, Kwon, Y, Hyun, J, Lee, C, Eom, S.H, Kim, M.H.
Deposit date:2018-10-03
Release date:2019-08-07
Last modified:2020-02-19
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Makes caterpillars floppy-like effector-containing MARTX toxins require host ADP-ribosylation factor (ARF) proteins for systemic pathogenicity.
Proc.Natl.Acad.Sci.USA, 116, 2019
8T6B
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BU of 8t6b by Molmil
Human VMAT2 in complex with serotonin
Descriptor: SEROTONIN, Synaptic vesicular amine transporter
Authors:Pidathala, S, Dai, Y, Lee, C.H.
Deposit date:2023-06-15
Release date:2023-11-01
Last modified:2023-12-13
Method:ELECTRON MICROSCOPY (3.72 Å)
Cite:Mechanisms of neurotransmitter transport and drug inhibition in human VMAT2.
Nature, 623, 2023
8T69
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BU of 8t69 by Molmil
Human VMAT2 in complex with tetrabenazine
Descriptor: Synaptic vesicular amine transporter, tetrabenazine
Authors:Pidathala, S, Dai, Y, Lee, C.H.
Deposit date:2023-06-15
Release date:2023-11-01
Last modified:2023-12-13
Method:ELECTRON MICROSCOPY (2.89 Å)
Cite:Mechanisms of neurotransmitter transport and drug inhibition in human VMAT2.
Nature, 623, 2023
8T6A
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BU of 8t6a by Molmil
Human VMAT2 in complex with reserpine
Descriptor: Synaptic vesicular amine transporter, reserpine
Authors:Pidathala, S, Dai, Y, Lee, C.H.
Deposit date:2023-06-15
Release date:2023-11-01
Last modified:2023-12-13
Method:ELECTRON MICROSCOPY (3.17 Å)
Cite:Mechanisms of neurotransmitter transport and drug inhibition in human VMAT2.
Nature, 623, 2023
1KOZ
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BU of 1koz by Molmil
SOLUTION STRUCTURE OF OMEGA-GRAMMOTOXIN SIA
Descriptor: Voltage-dependent Channel Inhibitor
Authors:Takeuchi, K, Park, E.J, Lee, C.W, Kim, J.I, Takahashi, H, Swartz, K.J, Shimada, I.
Deposit date:2001-12-25
Release date:2002-08-28
Last modified:2024-10-16
Method:SOLUTION NMR
Cite:Solution structure of omega-grammotoxin SIA, a gating modifier of P/Q and N-type Ca(2+) channel.
J.Mol.Biol., 321, 2002
6JQS
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BU of 6jqs by Molmil
Structure of Transcription factor, GerE
Descriptor: DNA-binding response regulator
Authors:Lee, J.H, Lee, C.W.
Deposit date:2019-04-01
Release date:2019-04-24
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.09 Å)
Cite:Crystal structure of a transcription factor, GerE (PaGerE), from spore-forming bacterium Paenisporosarcina sp. TG-14.
Biochem.Biophys.Res.Commun., 513, 2019
7X14
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BU of 7x14 by Molmil
Crystal structure of phospho-FFAT motif of MIGA2 bound to VAPB
Descriptor: MIGA2 phospho FFAT motif, SULFATE ION, Vesicle-associated membrane protein-associated protein B
Authors:Kim, H, Lee, C.
Deposit date:2022-02-23
Release date:2022-09-14
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.675 Å)
Cite:Structural basis for mitoguardin-2 mediated lipid transport at ER-mitochondrial membrane contact sites.
Nat Commun, 13, 2022
9B1H
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BU of 9b1h by Molmil
Human urate transporter 1 URAT1 in complex with lesinurad
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Solute carrier family 22 member 12, lesinurad
Authors:Dai, Y, Lee, C.H.
Deposit date:2024-03-13
Release date:2024-09-18
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Transport mechanism and structural pharmacology of human urate transporter URAT1.
Cell Res., 2024
9B1O
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BU of 9b1o by Molmil
Pyrazinoate bound human URAT1 in the inward-facing state (site3)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, PYRAZINE-2-CARBOXYLIC ACID, Solute carrier family 22 member 12
Authors:Dai, Y, Lee, C.H.
Deposit date:2024-03-13
Release date:2024-09-18
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Transport mechanism and structural pharmacology of human urate transporter URAT1.
Cell Res., 2024
9B1J
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BU of 9b1j by Molmil
Urate bound human URAT1 in the inward-facing state
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, PHOSPHATE ION, Solute carrier family 22 member 12, ...
Authors:Dai, Y, Lee, C.H.
Deposit date:2024-03-13
Release date:2024-09-18
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Transport mechanism and structural pharmacology of human urate transporter URAT1.
Cell Res., 2024
9B1G
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BU of 9b1g by Molmil
Human urate transporter 1 URAT1 in complex with dotinurad
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Solute carrier family 22 member 12, dotinurad
Authors:Dai, Y, Lee, C.H.
Deposit date:2024-03-13
Release date:2024-09-18
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:Transport mechanism and structural pharmacology of human urate transporter URAT1.
Cell Res., 2024
9B1N
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BU of 9b1n by Molmil
Pyrazinoate bound human URAT1 in the inward-facing state (site2)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, PYRAZINE-2-CARBOXYLIC ACID, Solute carrier family 22 member 12
Authors:Dai, Y, Lee, C.H.
Deposit date:2024-03-13
Release date:2024-09-18
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Transport mechanism and structural pharmacology of human urate transporter URAT1.
Cell Res., 2024
9B1I
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BU of 9b1i by Molmil
Human urate transporter 1 URAT1 in complex with verinurad
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Solute carrier family 22 member 12, verinurad
Authors:Dai, Y, Lee, C.H.
Deposit date:2024-03-13
Release date:2024-09-18
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Transport mechanism and structural pharmacology of human urate transporter URAT1.
Cell Res., 2024
9B1M
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BU of 9b1m by Molmil
Pyrazinoate bound human URAT1 in the inward-facing state (site1)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, PYRAZINE-2-CARBOXYLIC ACID, Solute carrier family 22 member 12
Authors:Dai, Y, Lee, C.H.
Deposit date:2024-03-13
Release date:2024-09-18
Last modified:2024-10-23
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Transport mechanism and structural pharmacology of human urate transporter URAT1.
Cell Res., 2024
6M0Y
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BU of 6m0y by Molmil
KR-12 analog derived from human LL-37
Descriptor: LYS-ARG-ILE-VAL-LYS-ARG-ILE-LYS-LYS-TRP-LEU-ARG
Authors:Yun, H, Min, H.J, Lee, C.W.
Deposit date:2020-02-24
Release date:2021-02-24
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:NMR Structure and Bactericidal Activity of KR-12 Analog Derived from Human LL-37 as a Potential Cosmetic Preservative
To Be Published
7WAN
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BU of 7wan by Molmil
Crystal structure of HaloTag complexed with UL2
Descriptor: (R)-[4-(2-azanylhydrazinyl)phenyl]-[2-[2-(2-hexoxyethoxy)ethoxy]ethylamino]methanol, CHLORIDE ION, Haloalkane dehalogenase
Authors:Pratyush, M, Kang, M, Lee, H, Lee, C, Rhee, H.
Deposit date:2021-12-14
Release date:2022-02-02
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.284 Å)
Cite:A chemical tool for blue light-inducible proximity photo-crosslinking in live cells.
Chem Sci, 13, 2022
7WAM
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BU of 7wam by Molmil
Crystal structure of HaloTag complexed with VL1
Descriptor: 3-[6-(2-azanylhydrazinyl)-1,3-bis(oxidanylidene)benzo[de]isoquinolin-2-yl]-N-[2-(2-hexoxyethoxy)ethyl]propanamide, CHLORIDE ION, Haloalkane dehalogenase
Authors:Pratyush, M, Kang, M, Lee, H, Lee, C, Rhee, H.
Deposit date:2021-12-14
Release date:2022-02-02
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.49 Å)
Cite:A chemical tool for blue light-inducible proximity photo-crosslinking in live cells.
Chem Sci, 13, 2022
5B26
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BU of 5b26 by Molmil
Crystal structure of mouse SEL1L
Descriptor: Protein sel-1 homolog 1
Authors:Jeong, H, Lee, C.
Deposit date:2016-01-09
Release date:2016-04-27
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal structure of SEL1L: Insight into the roles of SLR motifs in ERAD pathway
Sci Rep, 6, 2016
7X15
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BU of 7x15 by Molmil
Crystal structure of MIGA2 LD targeting domain
Descriptor: DI-PALMITOYL-3-SN-PHOSPHATIDYLETHANOLAMINE, FORMIC ACID, Mitoguardin 2
Authors:Kim, H, Lee, C.
Deposit date:2022-02-23
Release date:2022-09-14
Method:X-RAY DIFFRACTION (2.852 Å)
Cite:Structural basis for mitoguardin-2 mediated lipid transport at ER-mitochondrial membrane contact sites.
Nat Commun, 13, 2022
5Y2X
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BU of 5y2x by Molmil
Crystal structure of apo-HaloTag (M175C)
Descriptor: CHLORIDE ION, Haloalkane dehalogenase
Authors:Lee, H, Kang, M, Rhee, H, Lee, C.
Deposit date:2017-07-27
Release date:2017-09-06
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.02 Å)
Cite:Structure-guided synthesis of a protein-based fluorescent sensor for alkyl halides
Chem. Commun. (Camb.), 53, 2017
2QKY
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complex structure of dipeptidyl peptidase IV and a oxadiazolyl ketone
Descriptor: 2-[(2-{(2S,4S)-2-[(R)-(5-tert-butyl-1,3,4-oxadiazol-2-yl)(hydroxy)methyl]-4-fluoropyrrolidin-1-yl}-2-oxoethyl)amino]-2-methylpropan-1-ol, Dipeptidyl peptidase 4 (EC 3.4.14.5) (Dipeptidyl peptidase IV) (DPP IV) (T-cell activation antigen CD26) (TP103) (Adenosine deaminase complexing protein 2) (ADABP) (Dipeptidyl peptidase 4 soluble form) (Dipeptidyl peptidase IV soluble form)
Authors:Kim, K.-H, Hong, S.Y, Koo, K.D, Lee, C.-S, Kim, G.T, Han, H.O.
Deposit date:2007-07-12
Release date:2008-07-15
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Synthesis, SAR, and X-ray structure of novel potent DPPIV inhibitors: oxadiazolyl ketones.
Bioorg.Med.Chem.Lett., 17, 2007

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