Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 173 件

6S6H
DownloadVisualize
BU of 6s6h by Molmil
Crystal structure of the DNA binding domain of the chromosome-partitioning protein ParB complexed to the centromeric parS site
分子名称: Chromosome-partitioning protein ParB, DNA (5'-D(*GP*AP*TP*GP*TP*TP*TP*CP*AP*CP*GP*TP*GP*AP*AP*AP*CP*AP*TP*C)-3'), GLYCEROL
著者Jalal, A.S.B, Tran, N.T, Stevenson, C.E.M, Tan, E.X, Lawson, D.M, Le, T.B.K.
登録日2019-07-03
公開日2020-07-15
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Diversification of DNA-Binding Specificity by Permissive and Specificity-Switching Mutations in the ParB/Noc Protein Family.
Cell Rep, 32, 2020
6RT8
DownloadVisualize
BU of 6rt8 by Molmil
Structure of catharanthine synthase - an alpha-beta hydrolase from Catharanthus roseus with a cleaviminium intermediate bound
分子名称: 18-carboxymethoxy-cleaviminium, Catharanthine synthase, HEXAETHYLENE GLYCOL
著者Caputi, L, Franke, J, Bussey, K, Farrow, S.C, Curcino Vieira, I.J, Stevenson, C.E.M, Lawson, D.M, O'Connor, S.E.
登録日2019-05-22
公開日2020-03-04
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.19 Å)
主引用文献Structural basis of cycloaddition in biosynthesis of iboga and aspidosperma alkaloids.
Nat.Chem.Biol., 16, 2020
6T1F
DownloadVisualize
BU of 6t1f by Molmil
Crystal structure of the C-terminally truncated chromosome-partitioning protein ParB from Caulobacter crescentus complexed to the centromeric parS site
分子名称: Chromosome-partitioning protein ParB, DNA (5'-D(*GP*GP*AP*TP*GP*TP*TP*TP*CP*AP*CP*GP*TP*GP*AP*AP*AP*CP*AP*TP*CP*C)-3')
著者Jalal, A.S.B, Pastrana, C.L, Tran, N.T, Stevenson, C.E.M, Lawson, D.M, Moreno-Herrero, F, Le, T.B.K.
登録日2019-10-04
公開日2020-10-14
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献A CTP-dependent gating mechanism enables ParB spreading on DNA.
Elife, 10, 2021
7OL9
DownloadVisualize
BU of 7ol9 by Molmil
Crystal structure of C-terminally truncated Bacillus subtilis nucleoid occlusion protein (Noc) complexed to the Noc-binding site (NBS)
分子名称: DNA (5'-D(*TP*AP*TP*TP*TP*CP*CP*CP*GP*GP*GP*AP*AP*AP*TP*A)-3'), Nucleoid occlusion protein
著者Jalal, A.S.B, Lawson, D.M, Le, T.B.K.
登録日2021-05-19
公開日2022-03-09
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献The CTP-binding domain is disengaged from the DNA-binding domain in a cocrystal structure of Bacillus subtilis Noc-DNA complex.
J.Biol.Chem., 299, 2023
6ZT5
DownloadVisualize
BU of 6zt5 by Molmil
Complex between a homodimer of Mycobacterium smegmatis MfpA and a single copy of the N-terminal 47 kDa fragment of the Mycobacterium smegmatis DNA Gyrase B subunit
分子名称: DNA gyrase subunit B, Pentapeptide repeat protein MfpA, SULFATE ION
著者Feng, L, Mundy, J.E.A, Stevenson, C.E.M, Mitchenall, L.A, Lawson, D.M, Mi, K, Maxwell, A.
登録日2020-07-17
公開日2021-03-03
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献The pentapeptide-repeat protein, MfpA, interacts with mycobacterial DNA gyrase as a DNA T-segment mimic.
Proc.Natl.Acad.Sci.USA, 118, 2021
6ZT3
DownloadVisualize
BU of 6zt3 by Molmil
N-terminal 47 kDa fragment of the Mycobacterium smegmatis DNA Gyrase B subunit complexed with ADPNP
分子名称: 1,2-ETHANEDIOL, DNA gyrase subunit B, MAGNESIUM ION, ...
著者Feng, L, Mundy, J.E.A, Stevenson, C.E.M, Mitchenall, L.A, Lawson, D.M, Mi, K, Maxwell, A.
登録日2020-07-17
公開日2021-03-03
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.56 Å)
主引用文献The pentapeptide-repeat protein, MfpA, interacts with mycobacterial DNA gyrase as a DNA T-segment mimic.
Proc.Natl.Acad.Sci.USA, 118, 2021
6ZT4
DownloadVisualize
BU of 6zt4 by Molmil
Pentapeptide repeat protein MfpA from Mycobacterium smegmatis
分子名称: 1,2-ETHANEDIOL, Pentapeptide repeat protein MfpA
著者Feng, L, Mundy, J.E.A, Stevenson, C.E.M, Mitchenall, L.A, Lawson, D.M, Mi, K, Maxwell, A.
登録日2020-07-17
公開日2021-03-03
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.77 Å)
主引用文献The pentapeptide-repeat protein, MfpA, interacts with mycobacterial DNA gyrase as a DNA T-segment mimic.
Proc.Natl.Acad.Sci.USA, 118, 2021
5NJ9
DownloadVisualize
BU of 5nj9 by Molmil
E. coli Microcin-processing metalloprotease TldD/E with DRVY angiotensin fragment bound
分子名称: 1,2-ETHANEDIOL, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, ASP-ARG-VAL-TYR, ...
著者Ghilarov, D, Serebryakova, M, Stevenson, C.E.M, Hearnshaw, S.J, Volkov, D, Maxwell, A, Lawson, D.M, Severinov, K.
登録日2017-03-28
公開日2017-10-04
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.25 Å)
主引用文献The Origins of Specificity in the Microcin-Processing Protease TldD/E.
Structure, 25, 2017
5O98
DownloadVisualize
BU of 5o98 by Molmil
Binary complex of Catharanthus roseus Vitrosamine Synthase with NADP+
分子名称: Alcohol dehydrogenase 1, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
著者Stavrinides, A.K, Tatsis, E.C, Dang, T.T, Caputi, L, Stevenson, C.E.M, Lawson, D.M, Schneider, B, O'Connor, S.E.
登録日2017-06-16
公開日2018-02-21
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Discovery of a Short-Chain Dehydrogenase from Catharanthus roseus that Produces a New Monoterpene Indole Alkaloid.
Chembiochem, 19, 2018
5NZ8
DownloadVisualize
BU of 5nz8 by Molmil
Clostridium thermocellum cellodextrin phosphorylase with cellotetraose and phosphate bound
分子名称: Cellodextrin phosphorylase, PHOSPHATE ION, beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-4)-beta-D-glucopyranose
著者O'Neill, E.C, Pergolizzi, G, Stevenson, C.E.M, Lawson, D.M, Nepogodiev, S.A, Field, R.A.
登録日2017-05-12
公開日2017-08-09
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Cellodextrin phosphorylase from Ruminiclostridium thermocellum: X-ray crystal structure and substrate specificity analysis.
Carbohydr. Res., 451, 2017
7ANM
DownloadVisualize
BU of 7anm by Molmil
Nudaurelia capensis omega virus capsid: virus-like particles expressed in Nicotiana benthamiana
分子名称: p70
著者Castells-Graells, R, Ribeiro, J.R.S, Domitrovic, T, Hesketh, E.L, Scarff, C.A, Johnson, J.E, Ranson, N.A, Lawson, D.M, Lomonossoff, G.P.
登録日2020-10-12
公開日2021-08-25
最終更新日2024-07-10
実験手法ELECTRON MICROSCOPY (2.72 Å)
主引用文献Plant-expressed virus-like particles reveal the intricate maturation process of a eukaryotic virus.
Commun Biol, 4, 2021
7ATA
DownloadVisualize
BU of 7ata by Molmil
Nudaurelia capensis omega virus procapsid: virus-like particles expressed in Nicotiana benthamiana
分子名称: p70
著者Castells-Graells, R, Ribeiro, J.R.S, Domitrovic, T, Hesketh, E.L, Scarff, C.A, Johnson, J.E, Ranson, N.A, Lawson, D.M, Lomonossoff, G.P.
登録日2020-10-29
公開日2021-08-25
実験手法ELECTRON MICROSCOPY (6.63 Å)
主引用文献Plant-expressed virus-like particles reveal the intricate maturation process of a eukaryotic virus.
Commun Biol, 4, 2021
7BNT
DownloadVisualize
BU of 7bnt by Molmil
Complex of rice blast (Magnaporthe oryzae) effector protein AVR-PikD with a predicted ancestral HMA domain of Pik-1 from Oryza spp.
分子名称: 1,2-ETHANEDIOL, AVR-Pik protein, Predicted ancestral HMA domain of Pik-1 from Oryza spp.
著者Bialas, A, Langner, T, Harant, A, Contreras, M.P, Stevenson, C.E.M, Lawson, D.M, Sklenar, J, Kellner, R, Moscou, M.J, Terauchi, R, Banfield, M.J, Kamoun, S.
登録日2021-01-22
公開日2021-02-17
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.32 Å)
主引用文献Two NLR immune receptors acquired high-affinity binding to a fungal effector through convergent evolution of their integrated domain.
Elife, 10, 2021
5NJC
DownloadVisualize
BU of 5njc by Molmil
E. coli Microcin-processing metalloprotease TldD/E (TldD E263A mutant) with hexapeptide bound
分子名称: 1,2-ETHANEDIOL, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Metalloprotease PmbA, ...
著者Ghilarov, D, Serebryakova, M, Stevenson, C.E.M, Hearnshaw, S.J, Volkov, D, Maxwell, A, Lawson, D.M, Severinov, K.
登録日2017-03-28
公開日2017-10-04
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献The Origins of Specificity in the Microcin-Processing Protease TldD/E.
Structure, 25, 2017
7BM8
DownloadVisualize
BU of 7bm8 by Molmil
Crystal structure of the C-terminally truncated chromosome-partitioning protein ParB from Caulobacter crescentus complexed with CTP-gamma-S
分子名称: CYTIDINE-5'-TRIPHOSPHATE, Chromosome-partitioning protein ParB, MAGNESIUM ION
著者Jalal, A.S, Tran, N.T, Stevenson, C.E.M, Lawson, D.M, Le, T.B.K.
登録日2021-01-19
公開日2021-04-28
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.73 Å)
主引用文献A CTP-dependent gating mechanism enables ParB spreading on DNA.
Elife, 10, 2021
5NJ5
DownloadVisualize
BU of 5nj5 by Molmil
E. coli Microcin-processing metalloprotease TldD/E with phosphate bound
分子名称: 1,2-ETHANEDIOL, Metalloprotease PmbA, Metalloprotease TldD, ...
著者Ghilarov, D, Serebryakova, M, Stevenson, C.E.M, Hearnshaw, S.J, Volkov, D, Maxwell, A, Lawson, D.M, Severinov, K.
登録日2017-03-28
公開日2017-10-04
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献The Origins of Specificity in the Microcin-Processing Protease TldD/E.
Structure, 25, 2017
2Y3P
DownloadVisualize
BU of 2y3p by Molmil
Crystal structure of N-terminal domain of GyrA with the antibiotic simocyclinone D8
分子名称: DNA GYRASE SUBUNIT A, MAGNESIUM ION, SIMOCYCLINONE D8
著者Edwards, M.J, Flatman, R.H, Mitchenall, L.A, Stevenson, C.E.M, Le, T.B.K, Clarke, T.A, McKay, A.R, Fiedler, H.-P, Buttner, M.J, Lawson, D.M, Maxwell, A.
登録日2010-12-22
公開日2010-12-29
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.62 Å)
主引用文献A Crystal Structure of the Bifunctional Antibiotic Simocyclinone D8, Bound to DNA Gyrase.
Science, 326, 2009
5NJB
DownloadVisualize
BU of 5njb by Molmil
E. coli Microcin-processing metalloprotease TldD/E with actinonin bound
分子名称: 1,2-ETHANEDIOL, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, ACTINONIN, ...
著者Ghilarov, D, Serebryakova, M, Stevenson, C.E.M, Hearnshaw, S.J, Volkov, D, Maxwell, A, Lawson, D.M, Severinov, K.
登録日2017-03-28
公開日2017-10-04
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献The Origins of Specificity in the Microcin-Processing Protease TldD/E.
Structure, 25, 2017
5NJF
DownloadVisualize
BU of 5njf by Molmil
E. coli Microcin-processing metalloprotease TldD/E (TldD H262A mutant) with pentapeptide bound
分子名称: 1,2-ETHANEDIOL, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, ALA-ALA-ALA-ALA-ALA, ...
著者Ghilarov, D, Serebryakova, M, Stevenson, C.E.M, Hearnshaw, S.J, Volkov, D, Maxwell, A, Lawson, D.M, Severinov, K.
登録日2017-03-28
公開日2017-10-04
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.42 Å)
主引用文献The Origins of Specificity in the Microcin-Processing Protease TldD/E.
Structure, 25, 2017
5NZ7
DownloadVisualize
BU of 5nz7 by Molmil
Clostridium thermocellum cellodextrin phosphorylase ligand free form
分子名称: CHLORIDE ION, Cellodextrin phosphorylase
著者O'Neill, E.C, Pergolizzi, G, Stevenson, C.E.M, Lawson, D.M, Nepogodiev, S.A, Field, R.A.
登録日2017-05-12
公開日2017-08-09
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Cellodextrin phosphorylase from Ruminiclostridium thermocellum: X-ray crystal structure and substrate specificity analysis.
Carbohydr. Res., 451, 2017
5NJA
DownloadVisualize
BU of 5nja by Molmil
E. coli Microcin-processing metalloprotease TldD/E with angiotensin analogue bound
分子名称: 1,2-ETHANEDIOL, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, HIS-PRO-PHE, ...
著者Ghilarov, D, Serebryakova, M, Stevenson, C.E.M, Hearnshaw, S.J, Volkov, D, Maxwell, A, Lawson, D.M, Severinov, K.
登録日2017-03-28
公開日2017-10-04
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献The Origins of Specificity in the Microcin-Processing Protease TldD/E.
Structure, 25, 2017
6Y8O
DownloadVisualize
BU of 6y8o by Molmil
Mycobacterium smegmatis GyrB 22kDa ATPase sub-domain in complex with novobiocin
分子名称: 1,2-ETHANEDIOL, ACETATE ION, DNA gyrase subunit B, ...
著者Henderson, S.R, Stevenson, C.E.M, Malone, B, Zholnerovych, Y, Mitchenall, L.A, Pichowicz, M, McGarry, D.H, Cooper, I.R, Charrier, C, Salisbury, A, Lawson, D.M, Maxwell, A.
登録日2020-03-05
公開日2020-08-12
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Structural and mechanistic analysis of ATPase inhibitors targeting mycobacterial DNA gyrase.
J.Antimicrob.Chemother., 75, 2020
6Y8N
DownloadVisualize
BU of 6y8n by Molmil
Mycobacterium thermoresistibile GyrB21 in complex with Redx03863
分子名称: 1,2-ETHANEDIOL, 4-[(1~{S},5~{R})-6-azanyl-3-azabicyclo[3.1.0]hexan-3-yl]-6-fluoranyl-~{N}-methyl-2-(2-methylpyrimidin-5-yl)oxy-9~{H}-pyrimido[4,5-b]indol-8-amine, DNA gyrase subunit B, ...
著者Henderson, S.R, Stevenson, C.E.M, Malone, B, Zholnerovych, Y, Mitchenall, L.A, Pichowicz, M, McGarry, D.H, Cooper, I.R, Charrier, C, Salisbury, A, Lawson, D.M, Maxwell, A.
登録日2020-03-05
公開日2020-08-12
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Structural and mechanistic analysis of ATPase inhibitors targeting mycobacterial DNA gyrase.
J.Antimicrob.Chemother., 75, 2020
6YD9
DownloadVisualize
BU of 6yd9 by Molmil
Ecoli GyrB24 with inhibitor 16a
分子名称: 1,2-ETHANEDIOL, DNA gyrase subunit B, N-[6-(3-azanylpropanoylamino)-1,3-benzothiazol-2-yl]-3,4-bis(chloranyl)-5-methyl-1H-pyrrole-2-carboxamide
著者Barancokova, M, Skok, Z, Benek, O, Cruz, C.D, Tammela, P, Tomasic, T, Zidar, N, Masic, L.P, Zega, A, Stevenson, C.E.M, Mundy, J, Lawson, D.M, Maxwell, A.M, Kikelj, D, Ilas, J.
登録日2020-03-20
公開日2020-12-30
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Exploring the Chemical Space of Benzothiazole-Based DNA Gyrase B Inhibitors.
Acs Med.Chem.Lett., 11, 2020
6Y93
DownloadVisualize
BU of 6y93 by Molmil
Crystal structure of the DNA-binding domain of the Nucleoid Occlusion Factor (Noc) complexed to the Noc-binding site (NBS)
分子名称: Noc Binding Site (NBS), Nucleoid occlusion protein
著者Jalal, A.S.B, Tran, N.T, Stevenson, C.E.M, Chan, E, Lo, R, Tan, X, Noy, A, Lawson, D.M, Le, T.B.K.
登録日2020-03-06
公開日2020-08-05
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.23 Å)
主引用文献Diversification of DNA-Binding Specificity by Permissive and Specificity-Switching Mutations in the ParB/Noc Protein Family.
Cell Rep, 32, 2020

225681

件を2024-10-02に公開中

PDB statisticsPDBj update infoContact PDBjnumon