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PDB: 309 results

3C25
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BU of 3c25 by Molmil
Crystal Structure of NotI Restriction Endonuclease Bound to Cognate DNA
Descriptor: CALCIUM ION, DNA (5'-D(*DCP*DGP*DGP*DAP*DGP*DGP*DCP*DGP*DCP*DGP*DGP*DCP*DCP*DGP*DCP*DGP*DCP*DCP*DGP*DCP*DCP*DG)-3'), DNA (5'-D(*DCP*DGP*DGP*DCP*DGP*DGP*DCP*DGP*DCP*DGP*DGP*DCP*DCP*DGP*DCP*DGP*DCP*DCP*DTP*DCP*DCP*DG)-3'), ...
Authors:Lambert, A.R, Sussman, D, Shen, B, Stoddard, B.L.
Deposit date:2008-01-24
Release date:2008-02-12
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structures of the Rare-Cutting Restriction Endonuclease NotI Reveal a Unique Metal Binding Fold Involved in DNA Binding.
Structure, 16, 2008
4GMF
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BU of 4gmf by Molmil
Apo Structure of a Thiazolinyl Imine Reductase from Yersinia enterocolitica (Irp3)
Descriptor: 1,2-ETHANEDIOL, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, SULFATE ION, ...
Authors:Lamb, A.L, Meneely, K.M.
Deposit date:2012-08-15
Release date:2012-10-31
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Two Structures of a Thiazolinyl Imine Reductase from Yersinia enterocolitica Provide Insight into Catalysis and Binding to the Nonribosomal Peptide Synthetase Module of HMWP1.
Biochemistry, 51, 2012
4GMG
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BU of 4gmg by Molmil
NADP+ bound structure of a Thiazolinyl Imine Reductase from Yersinia enterocolitica (Irp3)
Descriptor: NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, Yersiniabactin biosynthetic protein YbtU
Authors:Lamb, A.L, Meneely, K.M.
Deposit date:2012-08-15
Release date:2012-10-31
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.31 Å)
Cite:Two Structures of a Thiazolinyl Imine Reductase from Yersinia enterocolitica Provide Insight into Catalysis and Binding to the Nonribosomal Peptide Synthetase Module of HMWP1.
Biochemistry, 51, 2012
1XEX
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BU of 1xex by Molmil
Structural biochemistry of ATP-driven dimerization and DNA stimulated activation of SMC ATPases.
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, SMC protein
Authors:Lammens, A, Schele, A, Hopfner, K.-P.
Deposit date:2004-09-13
Release date:2004-12-07
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural biochemistry of ATP-driven dimerization and DNA-stimulated activation of SMC ATPases
Curr.Biol., 14, 2004
3BVQ
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BU of 3bvq by Molmil
Crystal Structure of Apo NotI Restriction Endonuclease
Descriptor: FE (III) ION, NotI restriction endonuclease, SULFATE ION
Authors:Lambert, A.R, Sussman, D, Shen, B, Stoddard, B.L.
Deposit date:2008-01-07
Release date:2008-01-22
Last modified:2017-10-25
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structures of the Rare-Cutting Restriction Endonuclease NotI Reveal a Unique Metal Binding Fold Involved in DNA Binding.
Structure, 16, 2008
1QDS
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BU of 1qds by Molmil
SUPERSTABLE E65Q MUTANT OF LEISHMANIA MEXICANA TRIOSEPHOSPHATE ISOMERASE (TIM)
Descriptor: 2-PHOSPHOGLYCOLIC ACID, TRIOSEPHOSPHATE ISOMERASE
Authors:Lambeir, A.M, Backmann, J, Ruiz-Sanz, J, Filimonov, V, Nielsen, J.E, Vriend, G, Kursula, I, Norledge, B.V, Wierenga, R.K.
Deposit date:1999-07-10
Release date:2000-12-13
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2 Å)
Cite:The ionization of a buried glutamic acid is thermodynamically linked to the stability of Leishmania mexicana triose phosphate isomerase.
Eur.J.Biochem., 267, 2000
3KTA
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BU of 3kta by Molmil
Structural Basis for Adenylate Kinase Activity in ABC ATPases
Descriptor: BIS(ADENOSINE)-5'-PENTAPHOSPHATE, Chromosome segregation protein smc, MAGNESIUM ION
Authors:Lammens, A, Hopfner, K.P.
Deposit date:2009-11-24
Release date:2010-06-30
Last modified:2019-07-17
Method:X-RAY DIFFRACTION (1.627 Å)
Cite:Structural Basis for Adenylate Kinase Activity in ABC ATPases.
J.Mol.Biol., 401, 2010
1XEW
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BU of 1xew by Molmil
Structural biochemistry of ATP-driven dimerization and DNA stimulated activation of SMC ATPases.
Descriptor: SMC protein
Authors:Lammens, A, Schele, A, Hopfner, K.-P.
Deposit date:2004-09-13
Release date:2004-12-07
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural biochemistry of ATP-driven dimerization and DNA-stimulated activation of SMC ATPases
Curr.Biol., 14, 2004
4HT1
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BU of 4ht1 by Molmil
Human TWEAK in complex with the Fab fragment of a neutralizing antibody
Descriptor: Tumor necrosis factor ligand superfamily member 12, chimeric antibody Fab
Authors:Lammens, A.
Deposit date:2012-10-31
Release date:2013-06-12
Last modified:2017-11-15
Method:X-RAY DIFFRACTION (2.498 Å)
Cite:Crystal Structure of Human TWEAK in Complex with the Fab Fragment of a Neutralizing Antibody Reveals Insights into Receptor Binding.
Plos One, 8, 2013
1QUP
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BU of 1qup by Molmil
CRYSTAL STRUCTURE OF THE COPPER CHAPERONE FOR SUPEROXIDE DISMUTASE
Descriptor: SULFATE ION, SUPEROXIDE DISMUTASE 1 COPPER CHAPERONE
Authors:Lamb, A.L, Wernimont, A.K, Pufahl, R.A, O'Halloran, T.V, Rosenzweig, A.C.
Deposit date:1999-07-01
Release date:1999-12-10
Last modified:2018-06-27
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of the copper chaperone for superoxide dismutase.
Nat.Struct.Biol., 6, 1999
8EEB
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BU of 8eeb by Molmil
Cryo-EM structure of human ABCA7 in Digitonin
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Phospholipid-transporting ATPase ABCA7, ...
Authors:Alam, A, Le, L.T.M, Thompson, J.R.
Deposit date:2022-09-06
Release date:2022-12-21
Last modified:2023-02-15
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Cryo-EM structures of human ABCA7 provide insights into its phospholipid translocation mechanisms.
Embo J., 42, 2023
8EE6
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BU of 8ee6 by Molmil
Cryo-EM Structure of human ABCA7 in PE/Ch nanodiscs
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER, Phospholipid-transporting ATPase ABCA7, ...
Authors:Alam, A, Le, L.T.M, Thompson, J.R.
Deposit date:2022-09-06
Release date:2022-12-21
Last modified:2023-02-15
Method:ELECTRON MICROSCOPY (4 Å)
Cite:Cryo-EM structures of human ABCA7 provide insights into its phospholipid translocation mechanisms.
Embo J., 42, 2023
8EDW
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BU of 8edw by Molmil
Cryo-EM Structure of human ABCA7 in BPL/Ch Nanodiscs
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER, ...
Authors:Alam, A, Le, L.T.M, Thompson, J.R.
Deposit date:2022-09-06
Release date:2022-12-21
Last modified:2023-02-15
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Cryo-EM structures of human ABCA7 provide insights into its phospholipid translocation mechanisms.
Embo J., 42, 2023
8EOP
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BU of 8eop by Molmil
Cryo-EM Structure of Nanodisc reconstituted human ABCA7 EQ mutant in ATP bound closed state
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ADENOSINE-5'-TRIPHOSPHATE, ...
Authors:Alam, A, Le, L.T.M, Thompson, J.R.
Deposit date:2022-10-04
Release date:2022-12-21
Last modified:2023-02-15
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Cryo-EM structures of human ABCA7 provide insights into its phospholipid translocation mechanisms.
Embo J., 42, 2023
1T11
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BU of 1t11 by Molmil
Trigger Factor
Descriptor: Trigger factor
Authors:Ludlam, A.V, Moore, B.A, Xu, Z.
Deposit date:2004-04-14
Release date:2004-09-21
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:The crystal structure of ribosomal chaperone trigger factor from Vibrio cholerae.
Proc.Natl.Acad.Sci.USA, 101, 2004
7SVM
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BU of 7svm by Molmil
DPP8 IN COMPLEX WITH LIGAND ICeD-2
Descriptor: (2S)-2-amino-1-(1,3-dihydro-2H-isoindol-2-yl)-2-[(1r,4S)-4-(pyrrolidin-1-yl)cyclohexyl]ethan-1-one, Dipeptidyl peptidase 8, trimethylamine oxide
Authors:Lammens, A, Hollenstein, K, Klein, D.J.
Deposit date:2021-11-19
Release date:2022-10-05
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.69 Å)
Cite:A Phenotypic Screen Identifies Potent DPP9 Inhibitors Capable of Killing HIV-1 Infected Cells.
Acs Chem.Biol., 17, 2022
7SVN
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BU of 7svn by Molmil
DPP9 IN COMPLEX WITH LIGAND ICeD-1
Descriptor: (2S,4S)-1-[(2S)-2-amino-2-cyclohexylacetyl]-4-fluoropyrrolidine-2-carbonitrile, Dipeptidyl peptidase 9
Authors:Lammens, A, Hollenstein, K, Klein, D.J.
Deposit date:2021-11-19
Release date:2022-10-05
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.78 Å)
Cite:A Phenotypic Screen Identifies Potent DPP9 Inhibitors Capable of Killing HIV-1 Infected Cells.
Acs Chem.Biol., 17, 2022
7SVO
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BU of 7svo by Molmil
DPP8 IN COMPLEX WITH LIGAND ICeD-1
Descriptor: (2S,4S)-1-[(2S)-2-amino-2-cyclohexylacetyl]-4-fluoropyrrolidine-2-carbonitrile, Dipeptidyl peptidase 8, trimethylamine oxide
Authors:Lammens, A, Hollenstein, K, Klein, D.J.
Deposit date:2021-11-19
Release date:2022-10-05
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.58 Å)
Cite:A Phenotypic Screen Identifies Potent DPP9 Inhibitors Capable of Killing HIV-1 Infected Cells.
Acs Chem.Biol., 17, 2022
7SVL
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BU of 7svl by Molmil
DPP9 IN COMPLEX WITH LIGAND ICeD-2
Descriptor: (2S)-2-amino-1-(1,3-dihydro-2H-isoindol-2-yl)-2-[(1r,4S)-4-(pyrrolidin-1-yl)cyclohexyl]ethan-1-one, Dipeptidyl peptidase 9
Authors:Lammens, A, Hollenstein, K, Klein, D.J.
Deposit date:2021-11-19
Release date:2022-10-05
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.46 Å)
Cite:A Phenotypic Screen Identifies Potent DPP9 Inhibitors Capable of Killing HIV-1 Infected Cells.
Acs Chem.Biol., 17, 2022
6GL3
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BU of 6gl3 by Molmil
Crystal structure of human Phosphatidylinositol 4-kinase III beta (PI4KIIIbeta) in complex with ligand 44
Descriptor: (3~{S})-4-(6-azanyl-1-methyl-pyrazolo[3,4-d]pyrimidin-4-yl)-~{N}-(4-methoxy-2-methyl-phenyl)-3-methyl-piperazine-1-carboxamide, Phosphatidylinositol 4-kinase beta,Phosphatidylinositol 4-kinase beta
Authors:Lammens, A, Augustin, M, Steinbacher, S, Reuberson, J.
Deposit date:2018-05-22
Release date:2018-08-15
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (2.77 Å)
Cite:Discovery of a Potent, Orally Bioavailable PI4KIII beta Inhibitor (UCB9608) Able To Significantly Prolong Allogeneic Organ Engraftment in Vivo.
J. Med. Chem., 61, 2018
2H9C
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BU of 2h9c by Molmil
Native Crystal Structure of the Isochorismate-Pyruvate Lyase from Pseudomonas aeruginosa
Descriptor: NITRATE ION, Salicylate biosynthesis protein pchB
Authors:Lamb, A.L, Zaitseva, J, Lu, J.
Deposit date:2006-06-09
Release date:2006-08-15
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Two Crystal Structures of the Isochorismate Pyruvate Lyase from Pseudomonas aeruginosa.
J.Biol.Chem., 281, 2006
2H9D
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BU of 2h9d by Molmil
Pyruvate-Bound Structure of the Isochorismate-Pyruvate Lyase from Pseudomonas aerugionsa
Descriptor: CALCIUM ION, PYRUVIC ACID, Salicylate biosynthesis protein pchB
Authors:Lamb, A.L, Zaitseva, J, Lu, J.
Deposit date:2006-06-09
Release date:2006-08-15
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Two Crystal Structures of the Isochorismate Pyruvate Lyase from Pseudomonas aeruginosa.
J.Biol.Chem., 281, 2006
7RR9
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BU of 7rr9 by Molmil
Cryo-EM Structure of Nanodisc reconstituted ABCD1 in nucleotide bound outward open conformation
Descriptor: ATP-binding cassette sub-family D member 1, CHOLESTEROL, MAGNESIUM ION, ...
Authors:Alam, A, Le, L.T.M, Thompson, J.R.
Deposit date:2021-08-09
Release date:2022-01-19
Last modified:2024-06-05
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Structures of the human peroxisomal fatty acid transporter ABCD1 in a lipid environment
Commun Biol, 5, 2022
7RRA
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BU of 7rra by Molmil
Cryo-EM Structure of Nanodisc reconstituted ABCD1 in inward open conformation
Descriptor: ATP-binding cassette sub-family D member 1
Authors:Alam, A, Le, L.T.M, Thompson, J.R.
Deposit date:2021-08-09
Release date:2022-01-19
Last modified:2024-06-05
Method:ELECTRON MICROSCOPY (4.4 Å)
Cite:Structures of the human peroxisomal fatty acid transporter ABCD1 in a lipid environment
Commun Biol, 5, 2022
6FN1
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BU of 6fn1 by Molmil
Zosuquidar and UIC2 Fab complex of human-mouse chimeric ABCB1 (ABCB1HM)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Human-mouse chimeric ABCB1 (ABCBHM), UIC2 Antigen Binding Fragment Heavy Chain, ...
Authors:Alam, A, Locher, K.P.
Deposit date:2018-02-02
Release date:2018-02-21
Last modified:2020-07-29
Method:ELECTRON MICROSCOPY (3.58 Å)
Cite:Structure of a zosuquidar and UIC2-bound human-mouse chimeric ABCB1.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018

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