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PDB: 133 results

8BVM
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BU of 8bvm by Molmil
Cryo-EM structure of Hfq-Crc-rbsB translation repression complex
Descriptor: Catabolite repression control protein, RNA-binding protein Hfq, rbsB mRNA
Authors:Dendooven, T, Luisi, B.F.
Deposit date:2022-12-04
Release date:2023-01-25
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Translational regulation by Hfq-Crc assemblies emerges from polymorphic ribonucleoprotein folding.
Embo J., 42, 2023
8BVH
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BU of 8bvh by Molmil
Cryo-EM structure of the Hfq-Crc-amiE translation repression assembly.
Descriptor: Catabolite repression control protein, RNA-binding protein Hfq, amiE
Authors:Dendooven, T, Luisi, B.F.
Deposit date:2022-12-03
Release date:2023-06-07
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Translational regulation by Hfq-Crc assemblies emerges from polymorphic ribonucleoprotein folding.
Embo J., 42, 2023
2V08
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BU of 2v08 by Molmil
Structure of wild-type Phormidium laminosum cytochrome c6
Descriptor: CHLORIDE ION, CYTOCHROME C6, HEME C, ...
Authors:Worrall, J.A.R, Schlarb-Ridley, B.G, Reda, T, Marcaida, M.J, Moorlen, R.J, Wastl, J, Hirst, J, Bendall, D.S, Luisi, B.F, Howe, C.J.
Deposit date:2007-05-10
Release date:2007-07-24
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Modulation of heme redox potential in the cytochrome c6 family.
J. Am. Chem. Soc., 129, 2007
5NG5
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BU of 5ng5 by Molmil
multi-drug efflux; membrane transport; RND superfamily; Drug resistance
Descriptor: 6-[2-(3,4-dimethoxyphenyl)ethylsulfanyl]-8-[4-(2-methoxyethyl)piperazin-1-yl]-3,3-dimethyl-1,4-dihydropyrano[3,4-c]pyridine-5-carbonitrile, Multidrug efflux pump accessory protein AcrZ, Multidrug efflux pump subunit AcrA, ...
Authors:Wang, Z, Fan, G, Hryc, C.F, Blaza, J.N, Serysheva, I.I, Schmid, M.F, Chiu, W, Luisi, B.F, Du, D.
Deposit date:2017-03-16
Release date:2017-04-19
Last modified:2017-08-02
Method:ELECTRON MICROSCOPY (6.5 Å)
Cite:An allosteric transport mechanism for the AcrAB-TolC Multidrug Efflux Pump.
Elife, 6, 2017
2C7I
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BU of 2c7i by Molmil
Structure of protein Ta0514, putative lipoate protein ligase from T. acidophilum.
Descriptor: PUTATIVE LIPOATE PROTEIN LIGASE
Authors:Mcmanus, E, Perham, R.N, Luisi, B.F.
Deposit date:2005-11-24
Release date:2005-12-15
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structure of a Putative Lipoate Protein Ligase from Thermoplasma Acidophilum and the Mechanism of Target Selection for Post-Translational Modification.
J.Mol.Biol., 356, 2006
6TJ1
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BU of 6tj1 by Molmil
Crystal structure of a de novo designed hexameric helical-bundle protein
Descriptor: De novo designed WSHC6, purification tag
Authors:Xu, C, Pei, X.Y, Luisi, B.F, Baker, D.
Deposit date:2019-11-23
Release date:2020-04-29
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Computational design of transmembrane pores.
Nature, 585, 2020
5O66
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BU of 5o66 by Molmil
Asymmetric AcrABZ-TolC
Descriptor: Multidrug efflux pump accessory protein AcrZ, Multidrug efflux pump subunit AcrA, Multidrug efflux pump subunit AcrB, ...
Authors:Du, D, Luisi, B.F.
Deposit date:2017-06-05
Release date:2017-06-14
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (5.9 Å)
Cite:An allosteric transport mechanism for the AcrAB-TolC multidrug efflux pump.
Elife, 6, 2017
286D
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BU of 286d by Molmil
X-RAY AND SOLUTION STUDIES OF DNA OLIGOMERS AND IMPLICATIONS FOR THE STRUCTURAL BASIS OF A-TRACT-DEPENDENT CURVATURE
Descriptor: DNA (5'-D(*CP*CP*IP*IP*IP*CP*CP*CP*GP*G)-3')
Authors:Shatzky-Schwartz, M, Shakked, Z, Luisi, B.F.
Deposit date:1996-09-16
Release date:1997-05-08
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:X-ray and solution studies of DNA oligomers and implications for the structural basis of A-tract-dependent curvature.
J.Mol.Biol., 267, 1997
2AAO
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BU of 2aao by Molmil
Regulatory apparatus of Calcium Dependent protein kinase from Arabidopsis thaliana
Descriptor: CALCIUM ION, Calcium-dependent protein kinase, isoform AK1
Authors:Chandran, V, Stollar, E.J, Lindorff-Larsen, K, Harper, J.F, Chazin, W.J, Dobson, C.M, Luisi, B.F, Christodoulou, J.
Deposit date:2005-07-13
Release date:2005-12-27
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure of the regulatory apparatus of a calcium-dependent protein kinase (CDPK): a novel mode of calmodulin-target recognition.
J.Mol.Biol., 357, 2006
2C0B
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BU of 2c0b by Molmil
Catalytic domain of E. coli RNase E in complex with 13-mer RNA
Descriptor: 5'-R(*UP*UP*UP*AP*CP*AP*GP*UP*AP*UP*UP*UP*G)-3', MAGNESIUM ION, RIBONUCLEASE E, ...
Authors:Marcaida, M.J, Callaghan, A.J, Scott, W.G, Luisi, B.F.
Deposit date:2005-08-30
Release date:2005-10-14
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (3.18 Å)
Cite:Structure of E. Coli Rnase E Catalytic Domain and Implications for RNA Processing and Turnover
Nature, 437, 2005
2V07
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BU of 2v07 by Molmil
Structure of the Arabidopsis thaliana cytochrome c6A V52Q variant
Descriptor: CYTOCHROME C6, HEME C
Authors:Worrall, J.A.R, Schlarb-Ridley, B.G, Reda, T, Marcaida, M.J, Moorlen, R.J, Wastl, J, Hirst, J, Bendall, D.S, Luisi, B.F, Howe, C.J.
Deposit date:2007-05-09
Release date:2007-07-24
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Modulation of heme redox potential in the cytochrome c6 family.
J. Am. Chem. Soc., 129, 2007
2BP7
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BU of 2bp7 by Molmil
New crystal form of the Pseudomonas putida branched-chain dehydrogenase (E1)
Descriptor: 2-OXOISOVALERATE DEHYDROGENASE ALPHA SUBUNIT, 2-OXOISOVALERATE DEHYDROGENASE BETA SUBUNIT
Authors:Frank, R.A.W, Pratap, J.V, Pei, X.Y, Perham, R.N, Luisi, B.F.
Deposit date:2005-04-18
Release date:2005-08-10
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:The Molecular Origins of Specificity in the Assembly of a Multienzyme Complex.
Structure, 13, 2005
2C4R
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BU of 2c4r by Molmil
Catalytic domain of E. coli RNase E
Descriptor: MAGNESIUM ION, RIBONUCLEASE E, SSRNA MOLECULE: 5'-R(*AP*CP*AP*GP*UP*AP*UP*UP*UP*GP)-3', ...
Authors:Marcaida, M.J, Callaghan, A.J, Luisi, B.F.
Deposit date:2005-10-21
Release date:2005-10-25
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (3.6 Å)
Cite:Structure of E. Coli Rnase E Catalytic Domain and Implications for RNA Processing and Turnover
Nature, 437, 2005
5NIK
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BU of 5nik by Molmil
Structure of the MacAB-TolC ABC-type tripartite multidrug efflux pump
Descriptor: Macrolide export ATP-binding/permease protein MacB, Macrolide export protein MacA, Outer membrane protein TolC
Authors:Fitzpatrick, A.W.P, Llabres, S, Neuberger, A, Blaza, J.N, Bai, X.-C, Okada, U, Murakami, S, van Veen, H.W, Zachariae, U, Scheres, S.H.W, Luisi, B.F, Du, D.
Deposit date:2017-03-24
Release date:2017-05-24
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Structure of the MacAB-TolC ABC-type tripartite multidrug efflux pump.
Nat Microbiol, 2, 2017
5NIL
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BU of 5nil by Molmil
Structure of the MacAB-TolC ABC-type tripartite multidrug efflux pump-MacB section
Descriptor: Macrolide export ATP-binding/permease protein MacB, Macrolide export protein MacA, Outer membrane protein TolC
Authors:Fitzpatrick, A.W.P, Llabres, S, Neuberger, A, Blaza, J.N, Bai, X.-C, Okada, U, Murakami, S, van Veen, H.W, Zachariae, U, Scheres, S.H.W, Luisi, B.F, Du, D.
Deposit date:2017-03-24
Release date:2017-05-24
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (5.3 Å)
Cite:Structure of the MacAB-TolC ABC-type tripartite multidrug efflux pump.
Nat Microbiol, 2, 2017
2BX2
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BU of 2bx2 by Molmil
Catalytic domain of E. coli RNase E
Descriptor: MAGNESIUM ION, RIBONUCLEASE E, RNA (5'-R(*UP*UP*UP*AP*CP*AP*GP*UP*AP*UP*UP* UP*GP*UP*U)-3'), ...
Authors:Marcaida, M.J, Callaghan, A.J, Scott, W.G, Luisi, B.F.
Deposit date:2005-07-21
Release date:2005-10-14
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Structure of E. Coli Rnase E Catalytic Domain and Implications for RNA Processing and Turnover
Nature, 437, 2005
1W08
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BU of 1w08 by Molmil
STRUCTURE OF T70N HUMAN LYSOZYME
Descriptor: CHLORIDE ION, LYSOZYME
Authors:Johnson, R, Christodoulou, J, Luisi, B, Dumoulin, M, Caddy, G, Alcocer, M, Murtagh, G, Archer, D.B, Dobson, C.M.
Deposit date:2004-06-02
Release date:2004-06-10
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Rationalising Lysozyme Amyloidosis: Insights from the Structure and Solution Dynamics of T70N Lysozyme.
J.Mol.Biol., 352, 2005
2VDE
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BU of 2vde by Molmil
Crystal Structure of the Open State of TolC Outer Membrane Component of Mutlidrug Efflux Pumps
Descriptor: CHLORIDE ION, OUTER MEMBRANE PROTEIN TOLC
Authors:Bavro, V.N, Pietras, Z, Furnham, N, Perez-Cano, L, Fernandez-Recio, J, Pei, X.Y, Truer, R, Misra, R, Luisi, B.
Deposit date:2007-10-04
Release date:2008-04-22
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Assembly and Channel Opening in a Bacterial Drug Efflux Machine.
Mol.Cell, 30, 2008
2WVG
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BU of 2wvg by Molmil
Structural insights into the pre-reaction state of pyruvate decarboxylase from Zymomonas mobilis
Descriptor: 2-{1-[(4-AMINO-2-METHYLPYRIMIDIN-5-YL)METHYL]-5-METHYL-1H-1,2,3-TRIAZOL-4-YL}ETHYL TRIHYDROGEN DIPHOSPHATE, FLUORIDE ION, MAGNESIUM ION, ...
Authors:Pei, X.Y, Erixon, K, Luisi, B.F, Leeper, F.J.
Deposit date:2009-10-16
Release date:2010-02-09
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Structural Insights Into the Pre-Reaction State of Pyruvate Decarboxylase from Zymomonas Mobilis
Biochemistry, 49, 2010
2VDD
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BU of 2vdd by Molmil
Crystal Structure of the Open State of TolC Outer Membrane Component of Mutlidrug Efflux Pumps
Descriptor: CHLORIDE ION, OUTER MEMBRANE PROTEIN TOLC, POTASSIUM ION
Authors:Bavro, V.N, Pietras, Z, Furnham, N, Perez-Cano, L, Fernandez-Recio, J, Pei, X.Y, Truer, R, Misra, R, Luisi, B.
Deposit date:2007-10-04
Release date:2008-04-22
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Assembly and Channel Opening in a Bacterial Drug Efflux Machine.
Mol.Cell, 30, 2008
2VRT
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BU of 2vrt by Molmil
Crystal Structure of E. coli RNase E possessing M1 RNA fragments - Catalytic Domain
Descriptor: 5'-R(*UP*UP)-3', 5'-R(*UP*UP*GP)-3', RIBONUCLEASE E, ...
Authors:Koslover, D.J, Callaghan, A.J, Marcaida, M.J, Garman, E.F, Martick, M, Scott, W.G, Luisi, B.F.
Deposit date:2008-04-14
Release date:2008-07-22
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:The Crystal Structure of the Escherichia Coli Rnase E Apoprotein and a Mechanism for RNA Degradation.
Structure, 16, 2008
8CIB
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BU of 8cib by Molmil
Structural and functional analysis of the Pseudomonas aeruginosa PA1677 protein
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, ACETATE ION, Cysteine hydrolase, ...
Authors:Sonnleitner, E, Brear, P, Luisi, B.F, Blasi, U.
Deposit date:2023-02-09
Release date:2023-12-20
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:Catabolite repression control protein antagonist, a novel player in Pseudomonas aeruginosa carbon catabolite repression control.
Front Microbiol, 14, 2023
1YC9
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BU of 1yc9 by Molmil
The crystal structure of the outer membrane protein VceC from the bacterial pathogen Vibrio cholerae at 1.8 resolution
Descriptor: MERCURY (II) ION, multidrug resistance protein, octyl beta-D-glucopyranoside
Authors:Federici, L, Du, D, Walas, F, Matsumura, H, Fernandez-Recio, J, McKeegan, K.S, Borges-Walmsley, M.I, Luisi, B.F, Walmsley, A.R.
Deposit date:2004-12-22
Release date:2005-03-01
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:The crystal structure of the outer membrane protein VCEC from the bacterial pathogen vibrio cholerae at 1.8 A resolution
J.Biol.Chem., 280, 2005
2WVA
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BU of 2wva by Molmil
Structural insights into the pre-reaction state of pyruvate decarboxylase from Zymomonas mobilis
Descriptor: 2-{1-[(4-AMINO-2-METHYLPYRIMIDIN-5-YL)METHYL]-5-METHYL-1H-1,2,3-TRIAZOL-4-YL}ETHYL TRIHYDROGEN DIPHOSPHATE, MAGNESIUM ION, PYRUVATE DECARBOXYLASE, ...
Authors:Pei, X.Y, Erixon, K, Luisi, B.F, Leeper, F.J.
Deposit date:2009-10-15
Release date:2010-02-09
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural Insights Into the Pre-Reaction State of Pyruvate Decarboxylase from Zymomonas Mobilis
Biochemistry, 49, 2010
244D
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BU of 244d by Molmil
THE HIGH-RESOLUTION CRYSTAL STRUCTURE OF A PARALLEL-STRANDED GUANINE TETRAPLEX
Descriptor: CALCIUM ION, DNA (5'-D(*TP*GP*GP*GP*GP*T)-3'), SODIUM ION
Authors:Laughlan, G, Murchie, A.I.H, Norman, D.G, Moore, M.H, Moody, P.C.E, Lilley, D.M.J, Luisi, B.
Deposit date:1995-10-19
Release date:1996-02-23
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:The high-resolution crystal structure of a parallel-stranded guanine tetraplex.
Science, 265, 1994

225946

數據於2024-10-09公開中

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