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PDB: 985 results

3SQZ
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BU of 3sqz by Molmil
Crystal structure of HMG_CoA synthase complexed with CoA
Descriptor: COENZYME A, GLYCEROL, Putative hydroxymethylglutaryl-CoA synthase
Authors:Liu, Y.H, Fu, T.M, Liu, X, Su, X.D.
Deposit date:2011-07-06
Release date:2012-07-11
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Crystal structure of HMG-CoA synthase from Streptococcus mutans
To be Published
3BGG
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BU of 3bgg by Molmil
Crystal structure of Human Orotidine 5'-monophosphate Decarboxylase complexed with BMP
Descriptor: 6-HYDROXYURIDINE-5'-PHOSPHATE, Uridine 5'-monophosphate synthase
Authors:Liu, Y, Tang, H.L, Wang, X.Y, Kotra, L.P, Pai, E.F.
Deposit date:2007-11-26
Release date:2007-12-11
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:Crystal structure of Human Orotidine 5'-monophosphate Decarboxylase complexed with BMP
To be Published
7VJQ
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BU of 7vjq by Molmil
Pectobacterium phage ZF40 apo-aca2 complexed with 26bp DNA substrate
Descriptor: CHLORIDE ION, DNA (27-MER), GLYCEROL, ...
Authors:Liu, Y.H, Zhang, L.S, Wu, B.X, Huang, H.D.
Deposit date:2021-09-28
Release date:2021-10-20
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.79 Å)
Cite:Structural basis for anti-CRISPR repression mediated by bacterial operon proteins Aca1 and Aca2.
J.Biol.Chem., 297, 2021
5T1G
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BU of 5t1g by Molmil
chromo shadow domain of CBX1 in complex with a histone peptide
Descriptor: Chromobox protein homolog 1, Histone H3.1, UNKNOWN ATOM OR ION
Authors:Liu, Y, Tempel, W, Bountra, C, Arrowsmith, C.H, Edwards, A.M, Min, J, Structural Genomics Consortium (SGC)
Deposit date:2016-08-19
Release date:2016-09-14
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:chromo shadow domain of CBX1 in complex with a histone peptide
To Be Published
5EDX
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BU of 5edx by Molmil
Crystal structure of swine CD8aa homodimer
Descriptor: CD8 alpha antigen
Authors:Liu, Y.J, Qi, J.X, Zhang, N.Z, Xia, C.
Deposit date:2015-10-22
Release date:2016-09-14
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.801 Å)
Cite:The structural basis of chicken, swine and bovine CD8 alpha alpha dimers provides insight into the co-evolution with MHC I in endotherm species.
Sci Rep, 6, 2016
5K0U
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BU of 5k0u by Molmil
CryoEM structure of the full virion of a human rhinovirus C
Descriptor: Capsid protein VP1, Capsid protein VP2, Capsid protein VP3, ...
Authors:Liu, Y, Hill, M.G, Klose, T, Chen, Z, Watters, K.E, Jiang, W, Palmenberg, A.C, Rossmann, M.G.
Deposit date:2016-05-17
Release date:2016-07-13
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (2.79 Å)
Cite:Atomic structure of a rhinovirus C, a virus species linked to severe childhood asthma.
Proc.Natl.Acad.Sci.USA, 113, 2016
7KLU
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BU of 7klu by Molmil
Tetrameric human mitochondrial Hsp90 (TRAP1) in the presence of AMP-PNP
Descriptor: Heat shock protein 75 kDa, mitochondrial, SpyCatcher, ...
Authors:Liu, Y.X, Agard, D.A.
Deposit date:2020-11-01
Release date:2021-11-03
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Cryo-EM analysis of human mitochondrial Hsp90 in multiple tetrameric states
To Be Published
8GO7
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BU of 8go7 by Molmil
Fungal immunomodulatory protein FIP-nha N5+39A
Descriptor: Fungal immunomodulatory protein FIP-nha
Authors:Liu, Y, Bastiaan-Net, S, Hoppenbrouwers, T, Li, Z, Wichers, H.J.
Deposit date:2022-08-24
Release date:2023-08-30
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.303 Å)
Cite:Glycosylation Contributes to Thermostability and Proteolytic Resistance of rFIP-nha ( Nectria haematococca ).
Molecules, 28, 2023
8GO5
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Fungal immunomodulatory protein FIP-nha WT
Descriptor: Fungal immunomodulatory proteins
Authors:Liu, Y, Bastiaan-Net, S, Hoppenbrouwers, T, Li, Z.
Deposit date:2022-08-24
Release date:2023-08-30
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.809 Å)
Cite:Glycosylation Contributes to Thermostability and Proteolytic Resistance of rFIP-nha ( Nectria haematococca ).
Molecules, 28, 2023
3SR7
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BU of 3sr7 by Molmil
Crystal structure of S. mutans isopentenyl pyrophosphate isomerase
Descriptor: Isopentenyl-diphosphate delta-isomerase, PHOSPHATE ION
Authors:Liu, Y.H, Fu, T.M, Liu, X, Su, X.D.
Deposit date:2011-07-07
Release date:2012-07-11
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.036 Å)
Cite:Crystal structure of S. mutans isopentenyl pyrophosphate isomerase
To be Published
4KIB
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BU of 4kib by Molmil
Crystal structure of methyltransferase from Streptomyces hygroscopicus complexed with S-adenosyl-L-homocysteine and methylphenylpyruvic acid
Descriptor: (2R)-2-hydroxy-3-phenylpropanoic acid, (3R)-2-oxo-3-phenylbutanoic acid, CALCIUM ION, ...
Authors:Liu, Y.C, Zou, X.W, Chan, H.C, Huang, C.J, Li, T.L.
Deposit date:2013-05-02
Release date:2014-05-07
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure and mechanism of a nonhaem-iron SAM-dependent C-methyltransferase and its engineering to a hydratase and an O-methyltransferase
Acta Crystallogr.,Sect.D, 70, 2014
4KIF
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BU of 4kif by Molmil
Crystal structure of methyltransferase from Streptomyces hygroscopicus complexed with phenylpyruvic acid
Descriptor: (2R)-2-hydroxy-3-phenylpropanoic acid, 3-PHENYLPYRUVIC ACID, CALCIUM ION, ...
Authors:Liu, Y.C, Zou, X.W, Chan, H.C, Huang, C.J, Li, T.L.
Deposit date:2013-05-02
Release date:2014-05-07
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structure and mechanism of a nonhaem-iron SAM-dependent C-methyltransferase and its engineering to a hydratase and an O-methyltransferase
Acta Crystallogr.,Sect.D, 70, 2014
5F3W
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BU of 5f3w by Molmil
Structure of the ATPrS-Mre11/Rad50-DNA complex
Descriptor: 27-MER DNA, DNA double-strand break repair Rad50 ATPase,DNA double-strand break repair Rad50 ATPase, DNA double-strand break repair protein Mre11, ...
Authors:Liu, Y.
Deposit date:2015-12-03
Release date:2016-03-02
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (3.11 Å)
Cite:ATP-dependent DNA binding, unwinding, and resection by the Mre11/Rad50 complex
Embo J., 35, 2016
4KIG
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BU of 4kig by Molmil
Crystal structure of methyltransferase from Streptomyces hygroscopicus complexed with 4-hydroxyphenylpyruvic acid
Descriptor: (2R)-2-HYDROXY-3-(4-HYDROXYPHENYL)PROPANOIC ACID, 3-(4-HYDROXY-PHENYL)PYRUVIC ACID, CALCIUM ION, ...
Authors:Liu, Y.C, Zou, X.W, Chan, H.C, Huang, C.J, Li, T.L.
Deposit date:2013-05-02
Release date:2014-05-07
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structure and mechanism of a nonhaem-iron SAM-dependent C-methyltransferase and its engineering to a hydratase and an O-methyltransferase
Acta Crystallogr.,Sect.D, 70, 2014
3G3M
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BU of 3g3m by Molmil
Crystal Structure of Human Orotidine 5'-monophosphate Decarboxylase Covalently Modified by 5-fluoro-6-iodo-UMP
Descriptor: 5-FLUORO-URIDINE-5'-MONOPHOSPHATE, Uridine 5'-monophosphate synthase
Authors:Liu, Y, Tang, H.L, Bello, A.M, Poduch, E, Kotra, L.P, Pai, E.F.
Deposit date:2009-02-02
Release date:2009-03-03
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Structure-activity relationships of orotidine-5'-monophosphate decarboxylase inhibitors as anticancer agents.
J.Med.Chem., 52, 2009
4M9E
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BU of 4m9e by Molmil
Structure of Klf4 zinc finger DNA binding domain in complex with methylated DNA
Descriptor: ACETATE ION, DNA (5'-D(*GP*AP*GP*GP*(5CM)P*GP*TP*GP*GP*C)-3'), DNA (5'-D(*GP*CP*CP*AP*(5CM)P*GP*CP*CP*TP*C)-3'), ...
Authors:Liu, Y, Olanrewaju, Y.O, Blumenthal, R.M, Zhang, X, Cheng, X.
Deposit date:2013-08-14
Release date:2014-02-12
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.851 Å)
Cite:Structural basis for Klf4 recognition of methylated DNA.
Nucleic Acids Res., 42, 2014
4M6X
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BU of 4m6x by Molmil
Mutant structure of methyltransferase from Streptomyces hygroscopicus complexed with S-adenosyl-L-homocysteine and methylphenylpyruvic acid
Descriptor: (2R)-2-hydroxy-3-phenylpropanoic acid, (3R)-2-oxo-3-phenylbutanoic acid, CALCIUM ION, ...
Authors:Liu, Y.C, Zou, X.W, Chan, H.C, Huang, C.J, Li, T.L.
Deposit date:2013-08-12
Release date:2014-06-25
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure and mechanism of a nonhaem-iron SAM-dependent C-methyltransferase and its engineering to a hydratase and an O-methyltransferase
Acta Crystallogr.,Sect.D, 70, 2014
5DNY
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BU of 5dny by Molmil
Structure of the ATPrS-Mre11/Rad50-DNA complex
Descriptor: DNA (27-MER), DNA double-strand break repair Rad50 ATPase,DNA double-strand break repair Rad50 ATPase, DNA double-strand break repair protein Mre11, ...
Authors:Liu, Y.
Deposit date:2015-09-10
Release date:2016-02-24
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (3.11 Å)
Cite:ATP-dependent DNA binding, unwinding, and resection by the Mre11/Rad50 complex.
Embo J., 35, 2016
4M72
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BU of 4m72 by Molmil
Mutant structure of methyltransferase from Streptomyces hygroscopicus
Descriptor: (2R)-2-hydroxy-3-phenylpropanoic acid, (2R,3R)-2-hydroxy-3-methoxy-3-phenylpropanoic acid, CALCIUM ION, ...
Authors:Liu, Y.C, Zou, X.W, Chan, H.C, Huang, C.J, Li, T.L.
Deposit date:2013-08-12
Release date:2014-06-25
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structure and mechanism of a nonhaem-iron SAM-dependent C-methyltransferase and its engineering to a hydratase and an O-methyltransferase
Acta Crystallogr.,Sect.D, 70, 2014
4M6Y
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BU of 4m6y by Molmil
Mutant structure of methyltransferase from Streptomyces hygroscopicus complexed with S-adenosyl-L-homocysteine and methylphenylpyruvic acid
Descriptor: (2R)-2-hydroxy-3-phenylpropanoic acid, (3R)-2-oxo-3-phenylbutanoic acid, CALCIUM ION, ...
Authors:Liu, Y.C, Zou, X.W, Chan, H.C, Huang, C.J, Li, T.L.
Deposit date:2013-08-12
Release date:2014-06-25
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structure and mechanism of a nonhaem-iron SAM-dependent C-methyltransferase and its engineering to a hydratase and an O-methyltransferase
Acta Crystallogr.,Sect.D, 70, 2014
4KIC
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BU of 4kic by Molmil
Crystal structure of methyltransferase from Streptomyces hygroscopicus complexed with S-adenosyl-L-methionine and phenylpyruvic acid
Descriptor: (2R)-2-hydroxy-3-phenylpropanoic acid, 3-PHENYLPYRUVIC ACID, CALCIUM ION, ...
Authors:Liu, Y.C, Zou, X.W, Chan, H.C, Huang, C.J, Li, T.L.
Deposit date:2013-05-02
Release date:2014-05-07
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.43 Å)
Cite:Structure and mechanism of a nonhaem-iron SAM-dependent C-methyltransferase and its engineering to a hydratase and an O-methyltransferase
Acta Crystallogr.,Sect.D, 70, 2014
4M73
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BU of 4m73 by Molmil
Mutant structure of methyltransferase from Streptomyces hygroscopicus
Descriptor: (2R)-2-hydroxy-3-phenylpropanoic acid, (2R,3R)-2-hydroxy-3-methoxy-3-phenylpropanoic acid, CALCIUM ION, ...
Authors:Liu, Y.C, Zou, X.W, Chan, H.C, Huang, C.J, Li, T.L.
Deposit date:2013-08-12
Release date:2014-06-25
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure and mechanism of a nonhaem-iron SAM-dependent C-methyltransferase and its engineering to a hydratase and an O-methyltransferase
Acta Crystallogr.,Sect.D, 70, 2014
3MO7
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BU of 3mo7 by Molmil
Crystal structure of human orotidine 5'-monophosphate decarboxylase covalently modified by 2'-fluoro-6-iodo-UMP
Descriptor: 2'-deoxy-2'-fluorouridine 5'-(dihydrogen phosphate), GLYCEROL, Uridine 5'-monophosphate synthase
Authors:Liu, Y, Kotra, L.P, Pai, E.F.
Deposit date:2010-04-22
Release date:2011-04-06
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Novel interactions of fluorinated nucleotide derivatives targeting orotidine 5'-monophosphate decarboxylase.
J.Med.Chem., 54, 2011
4M9V
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BU of 4m9v by Molmil
Zfp57 mutant (E182Q) in complex with 5-carboxylcytosine DNA
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, ACETATE ION, CALCIUM ION, ...
Authors:Liu, Y, Olanrewaju, Y.O, Zhang, X, Cheng, X.
Deposit date:2013-08-15
Release date:2013-11-27
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (0.969 Å)
Cite:DNA recognition of 5-carboxylcytosine by a zfp57 mutant at an atomic resolution of 0.97 angstrom.
Biochemistry, 52, 2013
4M71
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BU of 4m71 by Molmil
Mutant structure of methyltransferase from Streptomyces hygroscopicus complexed with S-adenosyl-L-homocysteine and methylphenylpyruvic acid
Descriptor: (2R)-2-hydroxy-3-phenylpropanoic acid, (3R)-2-oxo-3-phenylbutanoic acid, CALCIUM ION, ...
Authors:Liu, Y.C, Zou, X.W, Chan, H.C, Huang, C.J, Li, T.L.
Deposit date:2013-08-12
Release date:2014-06-25
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.21 Å)
Cite:Structure and mechanism of a nonhaem-iron SAM-dependent C-methyltransferase and its engineering to a hydratase and an O-methyltransferase
Acta Crystallogr.,Sect.D, 70, 2014

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