Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 272 件

4W93
DownloadVisualize
BU of 4w93 by Molmil
Human pancreatic alpha-amylase in complex with montbretin A
分子名称: CALCIUM ION, CHLORIDE ION, Montbretin A, ...
著者Williams, L.K, Caner, S, Brayer, G.D.
登録日2014-08-27
公開日2015-07-15
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.352 Å)
主引用文献The amylase inhibitor montbretin A reveals a new glycosidase inhibition motif.
Nat.Chem.Biol., 11, 2015
3ZHC
DownloadVisualize
BU of 3zhc by Molmil
Structure of the phytase from Citrobacter braakii at 2.3 angstrom resolution.
分子名称: CHLORIDE ION, FORMIC ACID, PHYTASE
著者Wilson, K.S, Ariza, A, Sanchez-Romero, I, Skjot, M, Vind, J, DeMaria, L, Skov, L.K, Sanchez-Ruiz, J.M.
登録日2012-12-20
公開日2013-08-28
最終更新日2017-08-09
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Mechanism of Protein Kinetic Stabilization by Engineered Disulfide Crosslinks
Plos One, 8, 2013
5UKE
DownloadVisualize
BU of 5uke by Molmil
NMR structure of monomeric human IRAK-M Death Domain R56D, Y61E mutant
分子名称: Interleukin-1 receptor-associated kinase 3
著者Kwon, J, Nicholson, L.K.
登録日2017-01-20
公開日2018-01-24
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献The IL-33-PIN1-IRAK-M axis is critical for type 2 immunity in IL-33-induced allergic airway inflammation.
Nat Commun, 9, 2018
4X0N
DownloadVisualize
BU of 4x0n by Molmil
Porcine pancreatic alpha-amylase in complex with helianthamide, a novel proteinaceous inhibitor
分子名称: CALCIUM ION, CHLORIDE ION, GLYCEROL, ...
著者Williams, L.K, Brayer, G.D.
登録日2014-11-21
公開日2015-11-25
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.6001 Å)
主引用文献Structural Templating and Guided Refolding of the Potent Naturally Occurring Peptide Helianthamide Within the Active Site of Amylase, a Diabetes and Obesity Therapeutic Target
To Be Published
6L9I
DownloadVisualize
BU of 6l9i by Molmil
Crystal Structure of Lactobacillus farciminis Oxalate Decarboxylase Formate Complex
分子名称: FORMIC ACID, MANGANESE (II) ION, Oxalate decarboxylase
著者Wu, F, Cheng, L.K, Wang, C.Y.
登録日2019-11-10
公開日2021-01-20
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.79 Å)
主引用文献Crystal Structure of Lactobacillus farciminis Oxalate Decarboxylase Formate Complex
To Be Published
8C5R
DownloadVisualize
BU of 8c5r by Molmil
Omicron B.1.1.529 2 RBD up conformation
分子名称: Spike glycoprotein
著者Raghavan, S.S.R, Walker, M.R, Salanti, A, Barfod, L.K, Wang, K.T.
登録日2023-01-10
公開日2024-01-24
実験手法ELECTRON MICROSCOPY (3.7 Å)
主引用文献Omicron B.1.1.529 2 RBD up conformation
To Be Published
8FR5
DownloadVisualize
BU of 8fr5 by Molmil
Crystal structure of the Human Smacovirus 1 Rep domain
分子名称: MANGANESE (II) ION, Rep, SODIUM ION
著者Limon, L.K, Shi, K, Dao, A, Rugloski, J, Tompkins, K.J, Aihara, H, Gordon, W.R, Evans IIII, R.L.
登録日2023-01-06
公開日2023-12-27
実験手法X-RAY DIFFRACTION (1.33 Å)
主引用文献The crystal structure of the human smacovirus 1 Rep domain.
Acta Crystallogr.,Sect.F, 79, 2023
7K7P
DownloadVisualize
BU of 7k7p by Molmil
Structure of SARS-CoV-2 nonstuctural protein 1
分子名称: Host translation inhibitor nsp1
著者Green, T.J, Petit, C.M, Clark, L.K.
登録日2020-09-23
公開日2020-09-30
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.77 Å)
主引用文献Structure of Nonstructural Protein 1 from SARS-CoV-2.
J.Virol., 95, 2021
5NEV
DownloadVisualize
BU of 5nev by Molmil
CDK2/Cyclin A in complex with compound 73
分子名称: 4-[[6-(3-phenylphenyl)-7~{H}-purin-2-yl]amino]benzenesulfonamide, Cyclin-A2, Cyclin-dependent kinase 2
著者Coxon, C.R, Anscombe, E, Harnor, S.J, Martin, M.P, Carbain, B, Hardcastle, I.R, Harlow, L.K, Korolchuk, S, Matheson, C.J, Noble, M.E.M, Newell, D.R, Turner, D, Sivaprakasam, M, Wang, L.Z, Wong, C, Golding, B.T, Griffin, R.J, Cano, G.
登録日2017-03-12
公開日2017-03-29
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.97 Å)
主引用文献Cyclin-Dependent Kinase (CDK) Inhibitors: Structure-Activity Relationships and Insights into the CDK-2 Selectivity of 6-Substituted 2-Arylaminopurines.
J. Med. Chem., 60, 2017
7WQU
DownloadVisualize
BU of 7wqu by Molmil
FeoC from Klebsiella pneumoniae
分子名称: Ferrous iron transport protein B, Probable [Fe-S]-dependent transcriptional repressor
著者Hsueh, K.L, Yu, L.K, Hsieh, Y.C, Hsiao, Y.Y, Chen, C.J.
登録日2022-01-26
公開日2023-02-01
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (4.202 Å)
主引用文献FeoC from Klebsiella pneumoniae uses its iron sulfur cluster to regulate the GTPase activity of the ferrous iron channel.
Biochim Biophys Acta Proteins Proteom, 1871, 2023
4QW2
DownloadVisualize
BU of 4qw2 by Molmil
FMRP N-terminal domain (R138Q)
分子名称: 1,2-ETHANEDIOL, Fragile X mental retardation protein 1, LEAD (II) ION
著者Myrick, L.K, Hashimoto, H, Cheng, X, Warren, S.T.
登録日2014-07-16
公開日2014-12-03
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.989 Å)
主引用文献Human FMRP contains an integral tandem Agenet (Tudor) and KH motif in the amino terminal domain.
Hum.Mol.Genet., 24, 2015
5FRA
DownloadVisualize
BU of 5fra by Molmil
CBM40_CPF0721-6'SL
分子名称: ACETATE ION, N-acetyl-alpha-neuraminic acid, N-acetyl-alpha-neuraminic acid-(2-6)-beta-D-galactopyranose, ...
著者Ribeiro, J.P, Pau, W, Pifferi, C, Renaudet, O, Varrot, A, Mahal, L.K, Imberty, A.
登録日2015-12-16
公開日2016-07-20
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Characterization of a High-Affinity Sialic Acid-Specific Cbm40 from Clostridium Perfringens and Engineering of a Divalent Form.
Biochem.J., 473, 2016
4QVZ
DownloadVisualize
BU of 4qvz by Molmil
FMRP N-terminal domain
分子名称: 1,2-ETHANEDIOL, Fragile X mental retardation protein 1
著者Myrick, L.K, Hashimoto, H, Cheng, X, Warren, S.T.
登録日2014-07-16
公開日2014-12-03
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (3.195 Å)
主引用文献Human FMRP contains an integral tandem Agenet (Tudor) and KH motif in the amino terminal domain.
Hum.Mol.Genet., 24, 2015
1D8I
DownloadVisualize
BU of 1d8i by Molmil
X-RAY CRYSTAL STRUCTURE OF YEAST RNA TRIPHOSPHATASE IN COMPLEX WITH A SULFATE ION.
分子名称: MRNA TRIPHOSPHATASE CET1, SULFATE ION
著者Lima, C.D, Wang, L.K, Shuman, S.
登録日1999-10-24
公開日1999-11-29
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Structure and mechanism of yeast RNA triphosphatase: an essential component of the mRNA capping apparatus.
Cell(Cambridge,Mass.), 99, 1999
1D8H
DownloadVisualize
BU of 1d8h by Molmil
X-RAY CRYSTAL STRUCTURE OF YEAST RNA TRIPHOSPHATASE IN COMPLEX WITH SULFATE AND MANGANESE IONS.
分子名称: MANGANESE (II) ION, SULFATE ION, mRNA TRIPHOSPHATASE CET1
著者Lima, C.D, Wang, L.K, Shuman, S.
登録日1999-10-24
公開日1999-11-29
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structure and mechanism of yeast RNA triphosphatase: an essential component of the mRNA capping apparatus.
Cell(Cambridge,Mass.), 99, 1999
5FRE
DownloadVisualize
BU of 5fre by Molmil
Characterization of a novel CBM from Clostridium perfringens
分子名称: 2-(2-{2-[2-(2-METHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHANOL, ACETATE ION, CALCIUM ION, ...
著者Ribeiro, J, Pau, W, Pifferi, C, Renaudet, O, Varrot, A, Mahal, L.K, Imberty, A.
登録日2015-12-17
公開日2016-07-20
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Characterization of a High-Affinity Sialic Acid-Specific Cbm40 from Clostridium Perfringens and Engineering of a Divalent Form.
Biochem.J., 473, 2016
6WDQ
DownloadVisualize
BU of 6wdq by Molmil
IL23/IL23R/IL12Rb1 signaling complex
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Interleukin-12 receptor subunit beta-1, ...
著者Jude, K.M, Ely, L.K, Glassman, C.R, Thomas, C, Spangler, J.B, Lupardus, P.J, Garcia, K.C.
登録日2020-04-01
公開日2021-02-24
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (3.4 Å)
主引用文献Structural basis for IL-12 and IL-23 receptor sharing reveals a gateway for shaping actions on T versus NK cells.
Cell, 184, 2021
6X1K
DownloadVisualize
BU of 6x1k by Molmil
Solution NMR structure of de novo designed TMB2.3
分子名称: De novo designed transmembrane beta-barrel TMB2.3
著者Liang, B, Vorobieva, A.A, Chow, C.M, Baker, D, Tamm, L.K.
登録日2020-05-19
公開日2021-02-17
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献De novo design of transmembrane beta barrels.
Science, 371, 2021
6ZM8
DownloadVisualize
BU of 6zm8 by Molmil
Structure of muramidase from Acremonium alcalophilum
分子名称: muramidase
著者Moroz, O.V, Blagova, E, Taylor, E, Turkenburg, J.P, Skov, L.K, Gippert, G.P, Schnorr, K.M, Ming, L, Ye, L, Klausen, M, Cohn, M.T, Schmidt, E.G.W, Nymand-Grarup, S, Davies, G.J, Wilson, K.S.
登録日2020-07-01
公開日2021-07-14
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (0.78 Å)
主引用文献Fungal GH25 muramidases: New family members with applications in animal nutrition and a crystal structure at 0.78 angstrom resolution.
Plos One, 16, 2021
6ZMV
DownloadVisualize
BU of 6zmv by Molmil
Structure of muramidase from Trichobolus zukalii
分子名称: GLYCEROL, SULFATE ION, muramidase
著者Moroz, O.V, Blagova, E, Taylor, E, Turkenburg, J.P, Skov, L.K, Gippert, G.P, Schnorr, K.M, Ming, L, Ye, L, Klausen, M, Cohn, M.T, Schmidt, E.G.W, Nymand-Grarup, S, Davies, G.J, Wilson, K.S.
登録日2020-07-04
公開日2021-07-14
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Fungal GH25 muramidases: New family members with applications in animal nutrition and a crystal structure at 0.78 angstrom resolution.
Plos One, 16, 2021
6NCA
DownloadVisualize
BU of 6nca by Molmil
HLA-A2 (A*02:01) bound to a peptide from the Epstein-Barr virus BRLF1 protein
分子名称: Beta-2-microglobulin, HLA class I histocompatibility antigen, A-2 alpha chain, ...
著者Stern, L.J, Selin, L.K, Song, I.Y.
登録日2018-12-11
公開日2019-10-23
最終更新日2020-01-29
実験手法X-RAY DIFFRACTION (3.300001 Å)
主引用文献CDR3 alpha drives selection of the immunodominant Epstein Barr virus (EBV) BRLF1-specific CD8 T cell receptor repertoire in primary infection.
Plos Pathog., 15, 2019
6OQH
DownloadVisualize
BU of 6oqh by Molmil
Solution NMR structure of a quiet outer membrane protein G Nanopore (OmpG mutant: Delta-L6-D215)
分子名称: Outer membrane protein G
著者Sanganna Gari, R.R, Seelheim, P, Liang, B, Tamm, L.K.
登録日2019-04-26
公開日2019-06-05
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Quiet Outer Membrane Protein G (OmpG) Nanopore for Biosensing.
ACS Sens, 4, 2019
2VRQ
DownloadVisualize
BU of 2vrq by Molmil
STRUCTURE OF AN INACTIVE MUTANT OF ARABINOFURANOSIDASE FROM THERMOBACILLUS XYLANILYTICUS IN COMPLEX WITH A PENTASACCHARIDE
分子名称: ALPHA-L-ARABINOFURANOSIDASE, PHOSPHATE ION, alpha-L-arabinofuranose-(1-3)-[beta-D-xylopyranose-(1-4)]beta-D-xylopyranose-(1-4)-beta-D-xylopyranose, ...
著者Paes, G, Skov, L.K, Odonohue, M.J, Remond, C, Kastrup, J.S, Gajhede, M, Mirza, O.
登録日2008-04-09
公開日2008-07-01
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献The Structure of the Complex between a Branched Pentasaccharide and Thermobacillus Xylanilyticus Gh-51 Arabinofuranosidase Reveals Xylan-Binding Determinants and Induced Fit.
Biochemistry, 47, 2008
4MDF
DownloadVisualize
BU of 4mdf by Molmil
Structure of bacterial polynucleotide kinase Michaelis complex bound to GTP and DNA
分子名称: CITRIC ACID, DNA (5'-D(*CP*CP*TP*GP*T)-3'), GUANOSINE-5'-TRIPHOSPHATE, ...
著者Shuman, S, Das, U, Wang, L.K, Smith, P, Jacewicz, A.
登録日2013-08-22
公開日2013-11-06
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.727 Å)
主引用文献Structures of bacterial polynucleotide kinase in a Michaelis complex with GTP*Mg2+ and 5'-OH oligonucleotide and a product complex with GDP*Mg2+ and 5'-PO4 oligonucleotide reveal a mechanism of general acid-base catalysis and the determinants of phosphoacceptor recognition.
Nucleic Acids Res., 42, 2014
2VNY
DownloadVisualize
BU of 2vny by Molmil
Structure of PKA-PKB chimera complexed with (1-(9H-Purin-6-yl) piperidin-4-yl)amine
分子名称: 1-(9H-purin-6-yl)piperidin-4-amine, CAMP-DEPENDENT PROTEIN KINASE INHIBITOR ALPHA, CAMP-DEPENDENT PROTEIN KINASE, ...
著者Caldwell, J.J, Davies, T.G, Donald, A, McHardy, T, Rowlands, M.G, Aherne, G.W, Hunter, L.K, Taylor, K, Ruddle, R, Raynaud, F.I, Verdonk, M, Workman, P, Garrett, M.D, Collins, I.
登録日2008-02-08
公開日2008-04-08
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.96 Å)
主引用文献Identification of 4-(4-Aminopiperidin-1-Yl)-7H-Pyrrolo[2,3-D]Pyrimidines as Selective Inhibitors of Protein Kinase B Through Fragment Elaboration.
J.Med.Chem., 51, 2008

221716

件を2024-06-26に公開中

PDB statisticsPDBj update infoContact PDBjnumon